{"id":"https://openalex.org/W7150093809","doi":"https://doi.org/10.1007/s13755-026-00441-2","title":"DALI-Syn: integrating chemical LLMs with multi-level attention architectures for synergistic drug combination prediction","display_name":"DALI-Syn: integrating chemical LLMs with multi-level attention architectures for synergistic drug combination prediction","publication_year":2026,"publication_date":"2026-04-05","ids":{"openalex":"https://openalex.org/W7150093809","doi":"https://doi.org/10.1007/s13755-026-00441-2","pmid":"https://pubmed.ncbi.nlm.nih.gov/41948688"},"language":"en","primary_location":{"id":"doi:10.1007/s13755-026-00441-2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13755-026-00441-2","pdf_url":null,"source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13050669/","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5132986851","display_name":"Huanhuan Du","orcid":null},"institutions":[{"id":"https://openalex.org/I9224756","display_name":"Northeastern University","ror":"https://ror.org/03awzbc87","country_code":"CN","type":"education","lineage":["https://openalex.org/I9224756"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huanhuan Du","raw_affiliation_strings":["College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110819 Liaoning China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110819 Liaoning China","institution_ids":["https://openalex.org/I9224756"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114205647","display_name":"Yayu Tian","orcid":null},"institutions":[{"id":"https://openalex.org/I9224756","display_name":"Northeastern University","ror":"https://ror.org/03awzbc87","country_code":"CN","type":"education","lineage":["https://openalex.org/I9224756"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yayu Tian","raw_affiliation_strings":["College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110819 Liaoning China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110819 Liaoning China","institution_ids":["https://openalex.org/I9224756"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100391700","display_name":"Wei Wang","orcid":"https://orcid.org/0000-0001-6853-7785"},"institutions":[{"id":"https://openalex.org/I9224756","display_name":"Northeastern University","ror":"https://ror.org/03awzbc87","country_code":"CN","type":"education","lineage":["https://openalex.org/I9224756"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weiguang Wang","raw_affiliation_strings":["School of Computer Science and Engineering, Northeastern University, Shenyang, 110819 Liaoning China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Northeastern University, Shenyang, 110819 Liaoning China","institution_ids":["https://openalex.org/I9224756"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030769426","display_name":"Bo Wei","orcid":"https://orcid.org/0000-0001-8033-5668"},"institutions":[{"id":"https://openalex.org/I84884186","display_name":"Newcastle University","ror":"https://ror.org/01kj2bm70","country_code":"GB","type":"education","lineage":["https://openalex.org/I84884186"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Bo Wei","raw_affiliation_strings":["School of Computing, Newcastle University, Newcastle upon Tyne, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing, Newcastle University, Newcastle upon Tyne, UK","institution_ids":["https://openalex.org/I84884186"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109738587","display_name":"Ting Mei","orcid":null},"institutions":[{"id":"https://openalex.org/I9224756","display_name":"Northeastern University","ror":"https://ror.org/03awzbc87","country_code":"CN","type":"education","lineage":["https://openalex.org/I9224756"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ting Mei","raw_affiliation_strings":["College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110819 Liaoning China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110819 Liaoning China","institution_ids":["https://openalex.org/I9224756"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5124911014","display_name":"Hongbo Zhu","orcid":null},"institutions":[{"id":"https://openalex.org/I116036724","display_name":"Shenyang Ligong University","ror":"https://ror.org/03m20nr07","country_code":"CN","type":"education","lineage":["https://openalex.org/I116036724"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongbo Zhu","raw_affiliation_strings":["School of Information Science and Engineering, Shenyang Ligong University, Shenyang, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Shenyang Ligong University, Shenyang, China","institution_ids":["https://openalex.org/I116036724"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Zidan Yang","orcid":null},"institutions":[{"id":"https://openalex.org/I139759216","display_name":"Beijing University of Posts and Telecommunications","ror":"https://ror.org/04w9fbh59","country_code":"CN","type":"education","lineage":["https://openalex.org/I139759216"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zidan Yang","raw_affiliation_strings":["School of Computer Science, Beijing University of Posts and Telecommunications, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, Beijing University of Posts and Telecommunications, Beijing, China","institution_ids":["https://openalex.org/I139759216"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5132992998","display_name":"Xuan He","orcid":null},"institutions":[{"id":"https://openalex.org/I9224756","display_name":"Northeastern University","ror":"https://ror.org/03awzbc87","country_code":"CN","type":"education","lineage":["https://openalex.org/I9224756"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xuan He","raw_affiliation_strings":["College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110819 Liaoning China"],"raw_orcid":"https://orcid.org/0009-0000-0723-4828","affiliations":[{"raw_affiliation_string":"College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110819 Liaoning China","institution_ids":["https://openalex.org/I9224756"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5132992998"],"corresponding_institution_ids":["https://openalex.org/I9224756"],"apc_list":{"value":2590,"currency":"USD","value_usd":2590},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.35637303,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"14","issue":"1","first_page":"49","last_page":"49"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9559000134468079,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9559000134468079,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.014700000174343586,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.005400000140070915,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.637499988079071},{"id":"https://openalex.org/keywords/semantics","display_name":"Semantics (computer science)","score":0.6302000284194946},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.5058000087738037},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.4851999878883362},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4611000120639801},{"id":"https://openalex.org/keywords/convolution","display_name":"Convolution (computer science)","score":0.390500009059906},{"id":"https://openalex.org/keywords/test-set","display_name":"Test set","score":0.3603000044822693},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.33410000801086426},{"id":"https://openalex.org/keywords/training-set","display_name":"Training set","score":0.32850000262260437}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7531999945640564},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.637499988079071},{"id":"https://openalex.org/C184337299","wikidata":"https://www.wikidata.org/wiki/Q1437428","display_name":"Semantics (computer science)","level":2,"score":0.6302000284194946},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5720000267028809},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.5058000087738037},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4851999878883362},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.474700003862381},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4611000120639801},{"id":"https://openalex.org/C45347329","wikidata":"https://www.wikidata.org/wiki/Q5166604","display_name":"Convolution (computer science)","level":3,"score":0.390500009059906},{"id":"https://openalex.org/C169903167","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Test set","level":2,"score":0.3603000044822693},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.33410000801086426},{"id":"https://openalex.org/C51632099","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Training set","level":2,"score":0.32850000262260437},{"id":"https://openalex.org/C2989108626","wikidata":"https://www.wikidata.org/wiki/Q904407","display_name":"Drug target","level":2,"score":0.3246999979019165},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.3140000104904175},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.30469998717308044},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.30169999599456787},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.2987000048160553},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.29159998893737793},{"id":"https://openalex.org/C59404180","wikidata":"https://www.wikidata.org/wiki/Q17013334","display_name":"Feature learning","level":2,"score":0.28700000047683716},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.2816999852657318},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.28049999475479126},{"id":"https://openalex.org/C101814296","wikidata":"https://www.wikidata.org/wiki/Q5439685","display_name":"Feature model","level":3,"score":0.26260000467300415},{"id":"https://openalex.org/C99726746","wikidata":"https://www.wikidata.org/wiki/Q906396","display_name":"Chemical space","level":3,"score":0.2615000009536743},{"id":"https://openalex.org/C124304363","wikidata":"https://www.wikidata.org/wiki/Q673661","display_name":"Abstraction","level":2,"score":0.2556000053882599},{"id":"https://openalex.org/C2910466267","wikidata":"https://www.wikidata.org/wiki/Q718753","display_name":"Drug-drug interaction","level":3,"score":0.2547999918460846},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.250900000333786}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/s13755-026-00441-2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13755-026-00441-2","pdf_url":null,"source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},{"id":"pmid:41948688","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41948688","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health information science and systems","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:13050669","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13050669/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Health Inf Sci Syst","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:13050669","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13050669/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Health Inf Sci Syst","raw_type":"Text"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.4934440553188324,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G271956823","display_name":null,"funder_award_id":"N2319007","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G997686944","display_name":null,"funder_award_id":"61806048","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W2036291018","https://openalex.org/W2043398720","https://openalex.org/W2061061337","https://openalex.org/W2140595402","https://openalex.org/W2267040404","https://openalex.org/W2299417213","https://openalex.org/W2323328911","https://openalex.org/W2612467560","https://openalex.org/W2767106145","https://openalex.org/W2775061087","https://openalex.org/W2803581864","https://openalex.org/W2883248903","https://openalex.org/W2900516335","https://openalex.org/W2919115771","https://openalex.org/W2938206352","https://openalex.org/W2950860419","https://openalex.org/W2951449549","https://openalex.org/W2998807596","https://openalex.org/W3018980093","https://openalex.org/W3165195325","https://openalex.org/W3203908308","https://openalex.org/W4212966936","https://openalex.org/W4296907511","https://openalex.org/W4297632148","https://openalex.org/W4302827845","https://openalex.org/W4307468223","https://openalex.org/W4323031630","https://openalex.org/W4327676467","https://openalex.org/W4366835631","https://openalex.org/W4376604170","https://openalex.org/W4380743003","https://openalex.org/W4382501842","https://openalex.org/W4388631398","https://openalex.org/W4390893413","https://openalex.org/W4391005764","https://openalex.org/W4391103530","https://openalex.org/W4391561379","https://openalex.org/W4392909120","https://openalex.org/W4393374578","https://openalex.org/W4401798905","https://openalex.org/W4406139397","https://openalex.org/W4407156497","https://openalex.org/W4407319601","https://openalex.org/W4409560916","https://openalex.org/W4410395954"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2026-04-06T00:00:00"}
