{"id":"https://openalex.org/W4417172490","doi":"https://doi.org/10.1007/s13755-025-00401-2","title":"Interpretable large language models for early prediction of antimicrobial multidrug resistance","display_name":"Interpretable large language models for early prediction of antimicrobial multidrug resistance","publication_year":2025,"publication_date":"2025-12-09","ids":{"openalex":"https://openalex.org/W4417172490","doi":"https://doi.org/10.1007/s13755-025-00401-2","pmid":"https://pubmed.ncbi.nlm.nih.gov/41383823"},"language":"en","primary_location":{"id":"doi:10.1007/s13755-025-00401-2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13755-025-00401-2","pdf_url":null,"source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12690031/","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5120758836","display_name":"Luc\u00eda Carmona-Martos","orcid":null},"institutions":[{"id":"https://openalex.org/I182083151","display_name":"Universidad Rey Juan Carlos","ror":"https://ror.org/01v5cv687","country_code":"ES","type":"education","lineage":["https://openalex.org/I182083151"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Luc\u00eda Carmona-Martos","raw_affiliation_strings":["Department of Signal Theory and Communications, Telematics and Computing Systems, Rey Juan Carlos University, 28942 Fuenlabrada, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Signal Theory and Communications, Telematics and Computing Systems, Rey Juan Carlos University, 28942 Fuenlabrada, Spain","institution_ids":["https://openalex.org/I182083151"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115843658","display_name":"Paula Mart\u00edn-Palomeque","orcid":null},"institutions":[{"id":"https://openalex.org/I182083151","display_name":"Universidad Rey Juan Carlos","ror":"https://ror.org/01v5cv687","country_code":"ES","type":"education","lineage":["https://openalex.org/I182083151"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Paula Mart\u00edn-Palomeque","raw_affiliation_strings":["Department of Signal Theory and Communications, Telematics and Computing Systems, Rey Juan Carlos University, 28942 Fuenlabrada, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Signal Theory and Communications, Telematics and Computing Systems, Rey Juan Carlos University, 28942 Fuenlabrada, Spain","institution_ids":["https://openalex.org/I182083151"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015342142","display_name":"\u00d3scar Escudero-Arnanz","orcid":"https://orcid.org/0000-0002-5632-1212"},"institutions":[{"id":"https://openalex.org/I182083151","display_name":"Universidad Rey Juan Carlos","ror":"https://ror.org/01v5cv687","country_code":"ES","type":"education","lineage":["https://openalex.org/I182083151"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"\u00d3scar Escudero-Arnanz","raw_affiliation_strings":["Department of Signal Theory and Communications, Telematics and Computing Systems, Rey Juan Carlos University, 28942 Fuenlabrada, Spain"],"raw_orcid":"https://orcid.org/0000-0002-5632-1212","affiliations":[{"raw_affiliation_string":"Department of Signal Theory and Communications, Telematics and Computing Systems, Rey Juan Carlos University, 28942 Fuenlabrada, Spain","institution_ids":["https://openalex.org/I182083151"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084198564","display_name":"Cristina Soguero-Ru\u00edz","orcid":"https://orcid.org/0000-0001-5817-989X"},"institutions":[{"id":"https://openalex.org/I182083151","display_name":"Universidad Rey Juan Carlos","ror":"https://ror.org/01v5cv687","country_code":"ES","type":"education","lineage":["https://openalex.org/I182083151"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Cristina Soguero-Ruiz","raw_affiliation_strings":["Department of Signal Theory and Communications, Telematics and Computing Systems, Rey Juan Carlos University, 28942 Fuenlabrada, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Signal Theory and Communications, Telematics and Computing Systems, Rey Juan Carlos University, 28942 Fuenlabrada, Spain","institution_ids":["https://openalex.org/I182083151"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5015342142"],"corresponding_institution_ids":["https://openalex.org/I182083151"],"apc_list":{"value":3590,"currency":"USD","value_usd":3590},"apc_paid":null,"fwci":0.4217,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.66173853,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"14","issue":"1","first_page":"11","last_page":"11"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.12290000170469284,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.12290000170469284,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.10689999908208847,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10897","display_name":"Antibiotic Use and Resistance","score":0.09260000288486481,"subfield":{"id":"https://openalex.org/subfields/2402","display_name":"Applied Microbiology and Biotechnology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/multiple-drug-resistance","display_name":"Multiple drug resistance","score":0.507099986076355},{"id":"https://openalex.org/keywords/antibiotic-resistance","display_name":"Antibiotic resistance","score":0.37439998984336853},{"id":"https://openalex.org/keywords/predictive-modelling","display_name":"Predictive modelling","score":0.3546999990940094},{"id":"https://openalex.org/keywords/multiple-models","display_name":"Multiple Models","score":0.30570000410079956},{"id":"https://openalex.org/keywords/language-model","display_name":"Language model","score":0.30489999055862427},{"id":"https://openalex.org/keywords/computational-model","display_name":"Computational model","score":0.3041999936103821}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.567799985408783},{"id":"https://openalex.org/C133936738","wikidata":"https://www.wikidata.org/wiki/Q643839","display_name":"Multiple drug resistance","level":3,"score":0.507099986076355},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.46799999475479126},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4523000121116638},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.39500001072883606},{"id":"https://openalex.org/C94665300","wikidata":"https://www.wikidata.org/wiki/Q63391344","display_name":"Antibiotic resistance","level":3,"score":0.37439998984336853},{"id":"https://openalex.org/C45804977","wikidata":"https://www.wikidata.org/wiki/Q7239673","display_name":"Predictive modelling","level":2,"score":0.3546999990940094},{"id":"https://openalex.org/C2779714256","wikidata":"https://www.wikidata.org/wiki/Q25305062","display_name":"Multiple Models","level":2,"score":0.30570000410079956},{"id":"https://openalex.org/C137293760","wikidata":"https://www.wikidata.org/wiki/Q3621696","display_name":"Language model","level":2,"score":0.30489999055862427},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.3041999936103821},{"id":"https://openalex.org/C3019813237","wikidata":"https://www.wikidata.org/wiki/Q65089264","display_name":"Model validation","level":2,"score":0.29739999771118164},{"id":"https://openalex.org/C4937899","wikidata":"https://www.wikidata.org/wiki/Q68541106","display_name":"Antimicrobial","level":2,"score":0.2964000105857849},{"id":"https://openalex.org/C67186912","wikidata":"https://www.wikidata.org/wiki/Q367664","display_name":"Data modeling","level":2,"score":0.29589998722076416},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.27399998903274536},{"id":"https://openalex.org/C114851261","wikidata":"https://www.wikidata.org/wiki/Q12147416","display_name":"Drug resistance","level":2,"score":0.2736000120639801},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.273499995470047},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.26579999923706055},{"id":"https://openalex.org/C2994294914","wikidata":"https://www.wikidata.org/wiki/Q1645075","display_name":"Acquired resistance","level":3,"score":0.2565999925136566},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2515000104904175}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/s13755-025-00401-2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13755-025-00401-2","pdf_url":null,"source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},{"id":"pmid:41383823","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41383823","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health information science and systems","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12690031","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12690031/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Health Inf Sci Syst","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:12690031","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12690031/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Health Inf Sci Syst","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1851895436","display_name":null,"funder_award_id":"PID2022-136887NB-I00","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G2409277324","display_name":null,"funder_award_id":"TED2021-130347B-I00","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G41449784","display_name":null,"funder_award_id":"PID2023-149457OB-I00","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G5600582317","display_name":null,"funder_award_id":"PID2019-107768RA-I00","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G8282631658","display_name":null,"funder_award_id":"PID2019-105032GB-I00","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"}],"funders":[{"id":"https://openalex.org/F4320335598","display_name":"Agencia Estatal de Investigaci\u00f3n","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W401943522","https://openalex.org/W1993220166","https://openalex.org/W2010010077","https://openalex.org/W2041282815","https://openalex.org/W2064675550","https://openalex.org/W2157331557","https://openalex.org/W2342641385","https://openalex.org/W2796529081","https://openalex.org/W2805089815","https://openalex.org/W2911489562","https://openalex.org/W2949676527","https://openalex.org/W2963351448","https://openalex.org/W3034942609","https://openalex.org/W3207421551","https://openalex.org/W4206774194","https://openalex.org/W4220986537","https://openalex.org/W4294133266","https://openalex.org/W4313888691","https://openalex.org/W4319335604","https://openalex.org/W4319337625","https://openalex.org/W4383273076","https://openalex.org/W4384499185","https://openalex.org/W4386142022","https://openalex.org/W4386556015","https://openalex.org/W4386958277","https://openalex.org/W4388561287","https://openalex.org/W4388928465","https://openalex.org/W4399274928","https://openalex.org/W4399433746","https://openalex.org/W4400380297","https://openalex.org/W4401691715","https://openalex.org/W4401889742","https://openalex.org/W4402557213","https://openalex.org/W4403183073","https://openalex.org/W4404490147","https://openalex.org/W4406271218","https://openalex.org/W4407133000","https://openalex.org/W4407953581","https://openalex.org/W4409349694","https://openalex.org/W4410397980","https://openalex.org/W4411521353","https://openalex.org/W4412605470","https://openalex.org/W4413034357","https://openalex.org/W4416341697","https://openalex.org/W7083173069"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-12-09T00:00:00"}
