{"id":"https://openalex.org/W4408336684","doi":"https://doi.org/10.1007/s13755-025-00347-5","title":"Leveraging deep learning for epigenetic protein prediction: a novel approach for early lung cancer diagnosis and drug discovery","display_name":"Leveraging deep learning for epigenetic protein prediction: a novel approach for early lung cancer diagnosis and drug discovery","publication_year":2025,"publication_date":"2025-03-11","ids":{"openalex":"https://openalex.org/W4408336684","doi":"https://doi.org/10.1007/s13755-025-00347-5","pmid":"https://pubmed.ncbi.nlm.nih.gov/40083337"},"language":"en","primary_location":{"id":"doi:10.1007/s13755-025-00347-5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13755-025-00347-5","pdf_url":null,"source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11896910/","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086761503","display_name":"Farman Ali","orcid":"https://orcid.org/0000-0002-0914-1577"},"institutions":[{"id":"https://openalex.org/I59225215","display_name":"Bahria University","ror":"https://ror.org/02v8d7770","country_code":"PK","type":"education","lineage":["https://openalex.org/I59225215"]}],"countries":["PK"],"is_corresponding":true,"raw_author_name":"Farman Ali","raw_affiliation_strings":["Department of Computer Science, Bahria University Islamabad Campus, Islamabad, Pakistan"],"raw_orcid":"https://orcid.org/0000-0002-0914-1577","affiliations":[{"raw_affiliation_string":"Department of Computer Science, Bahria University Islamabad Campus, Islamabad, Pakistan","institution_ids":["https://openalex.org/I59225215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006566886","display_name":"Abdullah Almuhaimeed","orcid":"https://orcid.org/0000-0002-1155-9382"},"institutions":[{"id":"https://openalex.org/I1284598098","display_name":"King Abdulaziz City for Science and Technology","ror":"https://ror.org/05tdz6m39","country_code":"SA","type":"facility","lineage":["https://openalex.org/I1284598098"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Abdullah Almuhaimeed","raw_affiliation_strings":["King Abdulaziz City for Science and Technology, Digital Health Institute, 11442 Riyadh, Saudi Arabia","King Abdulaziz City for Science and Technology, Digital Health Institute, 11442, Riyadh, Saudi Arabia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"King Abdulaziz City for Science and Technology, Digital Health Institute, 11442 Riyadh, Saudi Arabia","institution_ids":["https://openalex.org/I1284598098"]},{"raw_affiliation_string":"King Abdulaziz City for Science and Technology, Digital Health Institute, 11442, Riyadh, Saudi Arabia","institution_ids":["https://openalex.org/I1284598098"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059292065","display_name":"Wajdi Alghamdi","orcid":"https://orcid.org/0000-0002-7999-2561"},"institutions":[{"id":"https://openalex.org/I185163786","display_name":"King Abdulaziz University","ror":"https://ror.org/02ma4wv74","country_code":"SA","type":"education","lineage":["https://openalex.org/I185163786"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Wajdi Alghamdi","raw_affiliation_strings":["Department of Information Technology, Faculty of Computing and Information Technology, King Abdulaziz University, 21589 Jeddah, Saudi Arabia","Department of Information Technology, Faculty of Computing and Information Technology, King Abdulaziz University, 21589, Jeddah, Saudi Arabia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Technology, Faculty of Computing and Information Technology, King Abdulaziz University, 21589 Jeddah, Saudi Arabia","institution_ids":["https://openalex.org/I185163786"]},{"raw_affiliation_string":"Department of Information Technology, Faculty of Computing and Information Technology, King Abdulaziz University, 21589, Jeddah, Saudi Arabia","institution_ids":["https://openalex.org/I185163786"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023421210","display_name":"Haya Aldossary","orcid":"https://orcid.org/0009-0001-2489-1843"},"institutions":[{"id":"https://openalex.org/I76571253","display_name":"Imam Abdulrahman Bin Faisal University","ror":"https://ror.org/038cy8j79","country_code":"SA","type":"education","lineage":["https://openalex.org/I76571253"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Haya Aldossary","raw_affiliation_strings":["Computer Science Department, College of Science and Humanities, Imam Abdulrahman Bin Faisal University, 31961 Jubail, Saudi Arabia","Computer Science Department, College of Science and Humanities, Imam Abdulrahman Bin Faisal University, 31961, Jubail, Saudi Arabia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science Department, College of Science and Humanities, Imam Abdulrahman Bin Faisal University, 31961 Jubail, Saudi Arabia","institution_ids":["https://openalex.org/I76571253"]},{"raw_affiliation_string":"Computer Science Department, College of Science and Humanities, Imam Abdulrahman Bin Faisal University, 31961, Jubail, Saudi Arabia","institution_ids":["https://openalex.org/I76571253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004433281","display_name":"Othman Asiry","orcid":null},"institutions":[{"id":"https://openalex.org/I4210099699","display_name":"University of Jeddah","ror":"https://ror.org/015ya8798","country_code":"SA","type":"education","lineage":["https://openalex.org/I4210099699"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Othman Asiry","raw_affiliation_strings":["Department of Information Technology, College of Computing and Information Technology at Khulais, University of Jeddah, Jeddah, Saudi Arabia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Technology, College of Computing and Information Technology at Khulais, University of Jeddah, Jeddah, Saudi Arabia","institution_ids":["https://openalex.org/I4210099699"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061689933","display_name":"Atef Masmoudi","orcid":"https://orcid.org/0000-0001-7540-3646"},"institutions":[{"id":"https://openalex.org/I82952536","display_name":"King Khalid University","ror":"https://ror.org/052kwzs30","country_code":"SA","type":"education","lineage":["https://openalex.org/I82952536"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Atef Masmoudi","raw_affiliation_strings":["Department of Computer Science, College of Computer Science, King Khalid University, 61421 Abha, Saudi Arabia","Department of Computer Science, College of Computer Science, King Khalid University, 61421, Abha, Saudi Arabia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, College of Computer Science, King Khalid University, 61421 Abha, Saudi Arabia","institution_ids":["https://openalex.org/I82952536"]},{"raw_affiliation_string":"Department of Computer Science, College of Computer Science, King Khalid University, 61421, Abha, Saudi Arabia","institution_ids":["https://openalex.org/I82952536"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5086761503"],"corresponding_institution_ids":["https://openalex.org/I59225215"],"apc_list":{"value":3590,"currency":"USD","value_usd":3590},"apc_paid":null,"fwci":2.5304,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.88794669,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"13","issue":"1","first_page":"28","last_page":"28"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9876999855041504,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9873999953269958,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/epigenetics","display_name":"Epigenetics","score":0.7074311375617981},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.65156489610672},{"id":"https://openalex.org/keywords/lung-cancer","display_name":"Lung cancer","score":0.5759760737419128},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5455056428909302},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.5377073287963867},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.49142515659332275},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4855027198791504},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.48097312450408936},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.40460577607154846},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.35252779722213745},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3422447443008423},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.31887486577033997},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3158627152442932},{"id":"https://openalex.org/keywords/oncology","display_name":"Oncology","score":0.29669189453125},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.2352571189403534},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1706847846508026},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.1473744511604309},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13608762621879578}],"concepts":[{"id":"https://openalex.org/C41091548","wikidata":"https://www.wikidata.org/wiki/Q26939","display_name":"Epigenetics","level":3,"score":0.7074311375617981},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.65156489610672},{"id":"https://openalex.org/C2776256026","wikidata":"https://www.wikidata.org/wiki/Q47912","display_name":"Lung cancer","level":2,"score":0.5759760737419128},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5455056428909302},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.5377073287963867},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.49142515659332275},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4855027198791504},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.48097312450408936},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.40460577607154846},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.35252779722213745},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3422447443008423},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.31887486577033997},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3158627152442932},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.29669189453125},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.2352571189403534},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1706847846508026},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.1473744511604309},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13608762621879578}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/s13755-025-00347-5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13755-025-00347-5","pdf_url":null,"source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},{"id":"pmid:40083337","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40083337","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health information science and systems","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11896910","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11896910/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Health Inf Sci Syst","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:11896910","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11896910/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Health Inf Sci Syst","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8921940643","display_name":null,"funder_award_id":"RGP. 2/424/45.","funder_id":"https://openalex.org/F33954902","funder_display_name":"Deanship of Scientific Research, King Khalid University"}],"funders":[{"id":"https://openalex.org/F33954902","display_name":"Deanship of Scientific Research, King Khalid University","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W1485819570","https://openalex.org/W1534977145","https://openalex.org/W2095125632","https://openalex.org/W2152201356","https://openalex.org/W2169363455","https://openalex.org/W2370182361","https://openalex.org/W2598979376","https://openalex.org/W2888408766","https://openalex.org/W2896195409","https://openalex.org/W2944052077","https://openalex.org/W2946492269","https://openalex.org/W2951512807","https://openalex.org/W2987011545","https://openalex.org/W2988542995","https://openalex.org/W3020424172","https://openalex.org/W3109659125","https://openalex.org/W3135368824","https://openalex.org/W3208498407","https://openalex.org/W4200142263","https://openalex.org/W4214632834","https://openalex.org/W4214656865","https://openalex.org/W4224095040","https://openalex.org/W4281480754","https://openalex.org/W4282929795","https://openalex.org/W4283811976","https://openalex.org/W4293374003","https://openalex.org/W4297516581","https://openalex.org/W4307818652","https://openalex.org/W4310415868","https://openalex.org/W4311447039","https://openalex.org/W4317039319","https://openalex.org/W4366451146","https://openalex.org/W4379876549","https://openalex.org/W4387729411","https://openalex.org/W4390858912","https://openalex.org/W4390861307","https://openalex.org/W4392906754","https://openalex.org/W4394853710","https://openalex.org/W4400624111","https://openalex.org/W4402665960","https://openalex.org/W4403548533","https://openalex.org/W4404184058"],"related_works":["https://openalex.org/W4366603091","https://openalex.org/W2485141070","https://openalex.org/W2411374999","https://openalex.org/W2083798468","https://openalex.org/W4380318195","https://openalex.org/W2206255701","https://openalex.org/W2618723461","https://openalex.org/W2979314934","https://openalex.org/W2146527561","https://openalex.org/W2770084104"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":2}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
