{"id":"https://openalex.org/W4408301712","doi":"https://doi.org/10.1007/s13755-025-00342-w","title":"iAMP-CRA: Identifying Antimicrobial Peptides Using Convolutional Recurrent Neural Network with Self-Attention","display_name":"iAMP-CRA: Identifying Antimicrobial Peptides Using Convolutional Recurrent Neural Network with Self-Attention","publication_year":2025,"publication_date":"2025-03-05","ids":{"openalex":"https://openalex.org/W4408301712","doi":"https://doi.org/10.1007/s13755-025-00342-w","pmid":"https://pubmed.ncbi.nlm.nih.gov/40062190"},"language":"en","primary_location":{"id":"doi:10.1007/s13755-025-00342-w","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13755-025-00342-w","pdf_url":null,"source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11883064/","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027061078","display_name":"Jun L\u00fc","orcid":"https://orcid.org/0000-0002-9141-6786"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingyao Lu","raw_affiliation_strings":["School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105 Hunan China","School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105, Hunan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105 Hunan China","institution_ids":["https://openalex.org/I4610292"]},{"raw_affiliation_string":"School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105, Hunan, China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019408282","display_name":"He Yang","orcid":"https://orcid.org/0000-0003-0604-8120"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang He","raw_affiliation_strings":["School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105 Hunan China","School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105, Hunan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105 Hunan China","institution_ids":["https://openalex.org/I4610292"]},{"raw_affiliation_string":"School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105, Hunan, China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062084611","display_name":"Guosheng Han","orcid":"https://orcid.org/0000-0002-7712-6213"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Guosheng Han","raw_affiliation_strings":["School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105 Hunan China","School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105, Hunan, China"],"raw_orcid":"https://orcid.org/0000-0002-7712-6213","affiliations":[{"raw_affiliation_string":"School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105 Hunan China","institution_ids":["https://openalex.org/I4610292"]},{"raw_affiliation_string":"School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105, Hunan, China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025314697","display_name":"Li Zeng","orcid":"https://orcid.org/0000-0001-6109-9583"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Li Zeng","raw_affiliation_strings":["School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105 Hunan China","School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105, Hunan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105 Hunan China","institution_ids":["https://openalex.org/I4610292"]},{"raw_affiliation_string":"School of Mathematics and Computational Science, Xiangtan University, Yuhu Street, Xiangtan, 411105, Hunan, China","institution_ids":["https://openalex.org/I4610292"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5025314697","https://openalex.org/A5062084611"],"corresponding_institution_ids":["https://openalex.org/I4610292"],"apc_list":{"value":2590,"currency":"USD","value_usd":2590},"apc_paid":null,"fwci":1.738,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.83218325,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"13","issue":"1","first_page":"25","last_page":"25"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13326","display_name":"Biochemical and Structural Characterization","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.737058162689209},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.707120954990387},{"id":"https://openalex.org/keywords/antimicrobial-peptides","display_name":"Antimicrobial peptides","score":0.6705288290977478},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.6448628902435303},{"id":"https://openalex.org/keywords/feature-learning","display_name":"Feature learning","score":0.63967365026474},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.6187374591827393},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.6149643659591675},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5280314683914185},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5140639543533325},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.49664145708084106},{"id":"https://openalex.org/keywords/feature-extraction","display_name":"Feature extraction","score":0.46828147768974304},{"id":"https://openalex.org/keywords/sequence-labeling","display_name":"Sequence labeling","score":0.4485465884208679},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.43030187487602234},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.41931167244911194},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10788759589195251},{"id":"https://openalex.org/keywords/antimicrobial","display_name":"Antimicrobial","score":0.0670616626739502}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.737058162689209},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.707120954990387},{"id":"https://openalex.org/C540938839","wikidata":"https://www.wikidata.org/wiki/Q1201508","display_name":"Antimicrobial peptides","level":3,"score":0.6705288290977478},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.6448628902435303},{"id":"https://openalex.org/C59404180","wikidata":"https://www.wikidata.org/wiki/Q17013334","display_name":"Feature learning","level":2,"score":0.63967365026474},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.6187374591827393},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.6149643659591675},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5280314683914185},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5140639543533325},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.49664145708084106},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.46828147768974304},{"id":"https://openalex.org/C35639132","wikidata":"https://www.wikidata.org/wiki/Q7452468","display_name":"Sequence labeling","level":3,"score":0.4485465884208679},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.43030187487602234},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.41931167244911194},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10788759589195251},{"id":"https://openalex.org/C4937899","wikidata":"https://www.wikidata.org/wiki/Q68541106","display_name":"Antimicrobial","level":2,"score":0.0670616626739502},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/s13755-025-00342-w","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13755-025-00342-w","pdf_url":null,"source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},{"id":"pmid:40062190","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40062190","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health information science and systems","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11883064","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11883064/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Health Inf Sci Syst","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:11883064","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11883064/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Health Inf Sci Syst","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.6700000166893005,"display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G1721076738","display_name":null,"funder_award_id":"2021JJ30684","funder_id":"https://openalex.org/F4320322866","funder_display_name":"Natural Science Foundation of Hainan Province"},{"id":"https://openalex.org/G6744169393","display_name":null,"funder_award_id":"CX20230546","funder_id":"https://openalex.org/F4320326217","funder_display_name":"Hunan Provincial Innovation Foundation for Postgraduate"}],"funders":[{"id":"https://openalex.org/F4320322866","display_name":"Natural Science Foundation of Hainan Province","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320326217","display_name":"Hunan Provincial Innovation Foundation for Postgraduate","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W179875071","https://openalex.org/W1976526581","https://openalex.org/W1984794455","https://openalex.org/W1998064689","https://openalex.org/W2042084565","https://openalex.org/W2047672715","https://openalex.org/W2109553965","https://openalex.org/W2112862199","https://openalex.org/W2114358087","https://openalex.org/W2119493141","https://openalex.org/W2129115651","https://openalex.org/W2129368756","https://openalex.org/W2150893872","https://openalex.org/W2157825442","https://openalex.org/W2158714788","https://openalex.org/W2241877823","https://openalex.org/W2525580669","https://openalex.org/W2588467130","https://openalex.org/W2612935389","https://openalex.org/W2618530766","https://openalex.org/W2791848964","https://openalex.org/W2793168264","https://openalex.org/W2807001312","https://openalex.org/W2954364924","https://openalex.org/W3003306158","https://openalex.org/W3025501158","https://openalex.org/W3081999257","https://openalex.org/W3124390867"],"related_works":["https://openalex.org/W2314450753","https://openalex.org/W4391621807","https://openalex.org/W2962906565","https://openalex.org/W4385723643","https://openalex.org/W2396126703","https://openalex.org/W2883687614","https://openalex.org/W2390495284","https://openalex.org/W2798423868","https://openalex.org/W3136610278","https://openalex.org/W4309346246"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
