{"id":"https://openalex.org/W4404373313","doi":"https://doi.org/10.1007/s13755-024-00309-3","title":"KSDKG: construction and application of knowledge graph for kidney stone disease based on biomedical literature and public databases","display_name":"KSDKG: construction and application of knowledge graph for kidney stone disease based on biomedical literature and public databases","publication_year":2024,"publication_date":"2024-11-14","ids":{"openalex":"https://openalex.org/W4404373313","doi":"https://doi.org/10.1007/s13755-024-00309-3","pmid":"https://pubmed.ncbi.nlm.nih.gov/39554224"},"language":"en","primary_location":{"id":"doi:10.1007/s13755-024-00309-3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13755-024-00309-3","pdf_url":null,"source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://research.vu.nl/en/publications/2a6598b5-7a57-47e3-9182-aea0a88a3a54","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030514608","display_name":"Jianping Man","orcid":"https://orcid.org/0000-0001-9675-906X"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianping Man","raw_affiliation_strings":["Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080 China","Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080 China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089019283","display_name":"Yufei Shi","orcid":"https://orcid.org/0000-0002-6999-0191"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yufei Shi","raw_affiliation_strings":["Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080 China","Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080 China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082376167","display_name":"Zhensheng Hu","orcid":"https://orcid.org/0009-0009-7255-1518"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhensheng Hu","raw_affiliation_strings":["Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080 China","Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080 China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030058072","display_name":"Rui Yang","orcid":"https://orcid.org/0000-0002-1886-5286"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rui Yang","raw_affiliation_strings":["Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080 China","Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080 China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101447313","display_name":"Zhisheng Huang","orcid":"https://orcid.org/0000-0003-3794-9829"},"institutions":[{"id":"https://openalex.org/I865915315","display_name":"Vrije Universiteit Amsterdam","ror":"https://ror.org/008xxew50","country_code":"NL","type":"education","lineage":["https://openalex.org/I865915315"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Zhisheng Huang","raw_affiliation_strings":["Knowledge Representation and Reasoning (KR &R) Group, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands","Knowledge Representation and Reasoning (KR &R) Group, Vrije Universiteit Amsterdam, 1081 HV, Amsterdam, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Representation and Reasoning (KR &R) Group, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands","institution_ids":["https://openalex.org/I865915315"]},{"raw_affiliation_string":"Knowledge Representation and Reasoning (KR &R) Group, Vrije Universiteit Amsterdam, 1081 HV, Amsterdam, The Netherlands","institution_ids":["https://openalex.org/I865915315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5037840405","display_name":"Yi Zhou","orcid":"https://orcid.org/0000-0002-4774-2234"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yi Zhou","raw_affiliation_strings":["Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080 China","Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080, China"],"raw_orcid":"https://orcid.org/0000-0002-4774-2234","affiliations":[{"raw_affiliation_string":"Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080 China","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, 510080, China","institution_ids":["https://openalex.org/I157773358"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":2790,"currency":"EUR","value_usd":3590},"apc_paid":null,"fwci":0.3616,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.67362369,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"12","issue":"1","first_page":"54","last_page":"54"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10606","display_name":"Kidney Stones and Urolithiasis Treatments","score":0.9829999804496765,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10606","display_name":"Kidney Stones and Urolithiasis Treatments","score":0.9829999804496765,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10408","display_name":"Chronic Kidney Disease and Diabetes","score":0.002199999988079071,"subfield":{"id":"https://openalex.org/subfields/2727","display_name":"Nephrology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10291","display_name":"Dialysis and Renal Disease Management","score":0.0017000000225380063,"subfield":{"id":"https://openalex.org/subfields/2727","display_name":"Nephrology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4615938663482666},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4167257249355316},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3946269154548645},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3398648500442505},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.32985514402389526},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.09786057472229004}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4615938663482666},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4167257249355316},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3946269154548645},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3398648500442505},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.32985514402389526},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.09786057472229004}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.1007/s13755-024-00309-3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13755-024-00309-3","pdf_url":null,"source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},{"id":"pmid:39554224","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39554224","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health information science and systems","raw_type":null},{"id":"pmh:oai:research.vu.nl:openaire_cris_publications/2a6598b5-7a57-47e3-9182-aea0a88a3a54","is_oa":true,"landing_page_url":"https://research.vu.nl/en/publications/2a6598b5-7a57-47e3-9182-aea0a88a3a54","pdf_url":null,"source":{"id":"https://openalex.org/S4306401107","display_name":"VU Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I865915315","host_organization_name":"Vrije Universiteit Amsterdam","host_organization_lineage":["https://openalex.org/I865915315"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Man, J, Shi, Y, Hu, Z, Yang, R, Huang, Z & Zhou, Y 2024, 'KSDKG: construction and application of knowledge graph for kidney stone disease based on biomedical literature and public databases', Health information science and systems, vol. 12, 54, pp. 1-15. https://doi.org/10.1007/s13755-024-00309-3","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pubmedcentral.nih.gov:11564440","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11564440/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11564440/pdf/13755_2024_Article_309.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Health Inf Sci Syst","raw_type":"Text"},{"id":"pmh:oai:research.vu.nl:openaire/2a6598b5-7a57-47e3-9182-aea0a88a3a54","is_oa":true,"landing_page_url":"https://hdl.handle.net/1871.1/2a6598b5-7a57-47e3-9182-aea0a88a3a54","pdf_url":null,"source":{"id":"https://openalex.org/S4306401107","display_name":"VU Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I865915315","host_organization_name":"Vrije Universiteit Amsterdam","host_organization_lineage":["https://openalex.org/I865915315"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Man, J, Shi, Y, Hu, Z, Yang, R, Huang, Z & Zhou, Y 2024, 'KSDKG: construction and application of knowledge graph for kidney stone disease based on biomedical literature and public databases', Health information science and systems, vol. 12, 54, pp. 1-15. https://doi.org/10.1007/s13755-024-00309-3","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:research.vu.nl:publications/2a6598b5-7a57-47e3-9182-aea0a88a3a54","is_oa":true,"landing_page_url":"https://research.vu.nl/files/383908575/KSDKG_construction_and_application_of_knowledge_graph_for_kidney_stone_disease_based_on_biomedical_literature_and_public_databases.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306401107","display_name":"VU Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I865915315","host_organization_name":"Vrije Universiteit Amsterdam","host_organization_lineage":["https://openalex.org/I865915315"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Man, J, Shi, Y, Hu, Z, Yang, R, Huang, Z & Zhou, Y 2024, 'KSDKG: construction and application of knowledge graph for kidney stone disease based on biomedical literature and public databases', Health information science and systems, vol. 12, 54, pp. 1-15. https://doi.org/10.1007/s13755-024-00309-3","raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":{"id":"pmh:oai:research.vu.nl:openaire_cris_publications/2a6598b5-7a57-47e3-9182-aea0a88a3a54","is_oa":true,"landing_page_url":"https://research.vu.nl/en/publications/2a6598b5-7a57-47e3-9182-aea0a88a3a54","pdf_url":null,"source":{"id":"https://openalex.org/S4306401107","display_name":"VU Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I865915315","host_organization_name":"Vrije Universiteit Amsterdam","host_organization_lineage":["https://openalex.org/I865915315"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Man, J, Shi, Y, Hu, Z, Yang, R, Huang, Z & Zhou, Y 2024, 'KSDKG: construction and application of knowledge graph for kidney stone disease based on biomedical literature and public databases', Health information science and systems, vol. 12, 54, pp. 1-15. https://doi.org/10.1007/s13755-024-00309-3","raw_type":"info:eu-repo/semantics/publishedVersion"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2482119677","display_name":null,"funder_award_id":"2022YFC3601600","funder_id":"https://openalex.org/F4320321160","funder_display_name":"Sun Yat-sen University"},{"id":"https://openalex.org/G2862752612","display_name":null,"funder_award_id":"202011020004","funder_id":"https://openalex.org/F4320336627","funder_display_name":"Special Fund Project for Science and Technology Innovation Strategy of Guangdong Province"},{"id":"https://openalex.org/G400981475","display_name":null,"funder_award_id":"24xkjc025","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G499273225","display_name":null,"funder_award_id":"2022YFC3601600","funder_id":"https://openalex.org/F4320335774","funder_display_name":"Key Technologies Research and Development Program"},{"id":"https://openalex.org/G7009240765","display_name":null,"funder_award_id":"202201011545","funder_id":"https://openalex.org/F4320335480","funder_display_name":"Guangzhou Municipal Science and Technology Project"},{"id":"https://openalex.org/G7777303378","display_name":null,"funder_award_id":"61876194","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8562715507","display_name":null,"funder_award_id":"24xkjc025","funder_id":"https://openalex.org/F4320321160","funder_display_name":"Sun Yat-sen University"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321160","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71"},{"id":"https://openalex.org/F4320335480","display_name":"Guangzhou Municipal Science and Technology Project","ror":null},{"id":"https://openalex.org/F4320335774","display_name":"Key Technologies Research and Development Program","ror":null},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null},{"id":"https://openalex.org/F4320336627","display_name":"Special Fund Project for Science and Technology Innovation Strategy of Guangdong Province","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":35,"referenced_works":["https://openalex.org/W2559588208","https://openalex.org/W2596568673","https://openalex.org/W2902941584","https://openalex.org/W3005843962","https://openalex.org/W3010336026","https://openalex.org/W3087223437","https://openalex.org/W3089715081","https://openalex.org/W3094217983","https://openalex.org/W3096841817","https://openalex.org/W3133319183","https://openalex.org/W3157219391","https://openalex.org/W3203514247","https://openalex.org/W4210706440","https://openalex.org/W4221024947","https://openalex.org/W4307838179","https://openalex.org/W4309950563","https://openalex.org/W4311424672","https://openalex.org/W4318486611","https://openalex.org/W4318983406","https://openalex.org/W4319438883","https://openalex.org/W4320525813","https://openalex.org/W4323036511","https://openalex.org/W4323667715","https://openalex.org/W4362579589","https://openalex.org/W4376114565","https://openalex.org/W4378904515","https://openalex.org/W4379599778","https://openalex.org/W4384071683","https://openalex.org/W4386443326","https://openalex.org/W4388601256","https://openalex.org/W4388794326","https://openalex.org/W4389577467","https://openalex.org/W4390642822","https://openalex.org/W4390692489","https://openalex.org/W6849832982"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
