{"id":"https://openalex.org/W4386331037","doi":"https://doi.org/10.1007/s13721-023-00427-0","title":"An exhaustive review of computational prediction techniques for PPI sites, protein locations, and protein functions","display_name":"An exhaustive review of computational prediction techniques for PPI sites, protein locations, and protein functions","publication_year":2023,"publication_date":"2023-08-31","ids":{"openalex":"https://openalex.org/W4386331037","doi":"https://doi.org/10.1007/s13721-023-00427-0"},"language":"en","primary_location":{"id":"doi:10.1007/s13721-023-00427-0","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13721-023-00427-0","pdf_url":null,"source":{"id":"https://openalex.org/S4210178532","display_name":"Network Modeling Analysis in Health Informatics and Bioinformatics","issn_l":"2192-6670","issn":["2192-6670","2192-6662"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310321666","host_organization_name":"Springer Vienna","host_organization_lineage":["https://openalex.org/P4310321666","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Vienna","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Network Modeling Analysis in Health Informatics and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087235526","display_name":"P Bhat","orcid":"https://orcid.org/0009-0004-7508-965X"},"institutions":[{"id":"https://openalex.org/I11880225","display_name":"National Institute of Technology Karnataka","ror":"https://ror.org/01hz4v948","country_code":"IN","type":"education","lineage":["https://openalex.org/I11880225"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Prajna Bhat","raw_affiliation_strings":["Department of Information Technology, National Institute of Technology Karnataka, Mangalore, 575025, Karnataka, India"],"raw_orcid":"https://orcid.org/0009-0004-7508-965X","affiliations":[{"raw_affiliation_string":"Department of Information Technology, National Institute of Technology Karnataka, Mangalore, 575025, Karnataka, India","institution_ids":["https://openalex.org/I11880225"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040815462","display_name":"Nagamma Patil","orcid":"https://orcid.org/0000-0001-9924-9559"},"institutions":[{"id":"https://openalex.org/I11880225","display_name":"National Institute of Technology Karnataka","ror":"https://ror.org/01hz4v948","country_code":"IN","type":"education","lineage":["https://openalex.org/I11880225"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Nagamma Patil","raw_affiliation_strings":["Department of Information Technology, National Institute of Technology Karnataka, Mangalore, 575025, Karnataka, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Technology, National Institute of Technology Karnataka, Mangalore, 575025, Karnataka, India","institution_ids":["https://openalex.org/I11880225"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5087235526"],"corresponding_institution_ids":["https://openalex.org/I11880225"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":null,"fwci":0.7432,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.67582171,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"12","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5245923399925232},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5232952237129211},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.505256712436676},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.4835462272167206},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4813276529312134},{"id":"https://openalex.org/keywords/subcellular-localization","display_name":"Subcellular localization","score":0.4219909608364105},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.4164021611213684},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.32888883352279663}],"concepts":[{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5245923399925232},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5232952237129211},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.505256712436676},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.4835462272167206},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4813276529312134},{"id":"https://openalex.org/C2776879804","wikidata":"https://www.wikidata.org/wiki/Q7630919","display_name":"Subcellular localization","level":3,"score":0.4219909608364105},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.4164021611213684},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.32888883352279663},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C190062978","wikidata":"https://www.wikidata.org/wiki/Q79899","display_name":"Cytoplasm","level":2,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s13721-023-00427-0","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13721-023-00427-0","pdf_url":null,"source":{"id":"https://openalex.org/S4210178532","display_name":"Network Modeling Analysis in Health Informatics and Bioinformatics","issn_l":"2192-6670","issn":["2192-6670","2192-6662"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310321666","host_organization_name":"Springer Vienna","host_organization_lineage":["https://openalex.org/P4310321666","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Vienna","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Network Modeling Analysis in Health Informatics and Bioinformatics","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":113,"referenced_works":["https://openalex.org/W127160757","https://openalex.org/W1980496079","https://openalex.org/W2001457899","https://openalex.org/W2009019259","https://openalex.org/W2017230497","https://openalex.org/W2021288400","https://openalex.org/W2045204781","https://openalex.org/W2072394638","https://openalex.org/W2097864049","https://openalex.org/W2108134720","https://openalex.org/W2119501676","https://openalex.org/W2120671490","https://openalex.org/W2123049990","https://openalex.org/W2135565251","https://openalex.org/W2141627824","https://openalex.org/W2151412657","https://openalex.org/W2154136145","https://openalex.org/W2155194485","https://openalex.org/W2170672962","https://openalex.org/W2194775991","https://openalex.org/W2417429787","https://openalex.org/W2531409750","https://openalex.org/W2603053732","https://openalex.org/W2613629789","https://openalex.org/W2615066396","https://openalex.org/W2618529956","https://openalex.org/W2618530766","https://openalex.org/W2624963583","https://openalex.org/W2722005050","https://openalex.org/W2754800853","https://openalex.org/W2799464676","https://openalex.org/W2807818025","https://openalex.org/W2810968367","https://openalex.org/W2906889822","https://openalex.org/W2908867979","https://openalex.org/W2911656517","https://openalex.org/W2913768779","https://openalex.org/W2921738946","https://openalex.org/W2939351159","https://openalex.org/W2944679105","https://openalex.org/W2946990319","https://openalex.org/W2951282333","https://openalex.org/W2951731136","https://openalex.org/W2955690154","https://openalex.org/W2963446712","https://openalex.org/W2963614249","https://openalex.org/W2965778154","https://openalex.org/W2971405760","https://openalex.org/W2971428843","https://openalex.org/W2973165790","https://openalex.org/W2977368063","https://openalex.org/W2981557831","https://openalex.org/W2984274952","https://openalex.org/W2990458240","https://openalex.org/W2992752586","https://openalex.org/W2995455303","https://openalex.org/W2998799485","https://openalex.org/W3002341417","https://openalex.org/W3003790283","https://openalex.org/W3009202743","https://openalex.org/W3013976849","https://openalex.org/W3023746197","https://openalex.org/W3025314715","https://openalex.org/W3028467496","https://openalex.org/W3038061184","https://openalex.org/W3048357930","https://openalex.org/W3080498684","https://openalex.org/W3083968401","https://openalex.org/W3089088681","https://openalex.org/W3097914258","https://openalex.org/W3098169577","https://openalex.org/W3110555488","https://openalex.org/W3110734869","https://openalex.org/W3111862902","https://openalex.org/W3112802026","https://openalex.org/W3112889838","https://openalex.org/W3115880421","https://openalex.org/W3123414736","https://openalex.org/W3133915333","https://openalex.org/W3157788980","https://openalex.org/W3163379025","https://openalex.org/W3163867547","https://openalex.org/W3164046276","https://openalex.org/W3168888942","https://openalex.org/W3187281825","https://openalex.org/W3187970204","https://openalex.org/W3197696221","https://openalex.org/W3200563416","https://openalex.org/W3202143517","https://openalex.org/W3206171364","https://openalex.org/W3207520855","https://openalex.org/W3208789486","https://openalex.org/W3217151645","https://openalex.org/W4205227681","https://openalex.org/W4205341153","https://openalex.org/W4205541781","https://openalex.org/W4205674121","https://openalex.org/W4205705151","https://openalex.org/W4206338776","https://openalex.org/W4207034301","https://openalex.org/W4210578073","https://openalex.org/W4213424733","https://openalex.org/W4220934922","https://openalex.org/W4220952154","https://openalex.org/W4224221080","https://openalex.org/W4225264859","https://openalex.org/W4225687252","https://openalex.org/W4225769528","https://openalex.org/W4236358448","https://openalex.org/W4281641996","https://openalex.org/W4283033894","https://openalex.org/W4297265642","https://openalex.org/W4311422829"],"related_works":["https://openalex.org/W4366498163","https://openalex.org/W2359834996","https://openalex.org/W2384565783","https://openalex.org/W2119797331","https://openalex.org/W4282922129","https://openalex.org/W1488408180","https://openalex.org/W1964033480","https://openalex.org/W2391458050","https://openalex.org/W4200245575","https://openalex.org/W2018494620"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-29T09:40:50.615796","created_date":"2025-10-10T00:00:00"}
