{"id":"https://openalex.org/W3208874625","doi":"https://doi.org/10.1007/s13721-021-00340-4","title":"An effective feature extraction with deep neural network architecture for protein-secondary-structure prediction","display_name":"An effective feature extraction with deep neural network architecture for protein-secondary-structure prediction","publication_year":2021,"publication_date":"2021-10-23","ids":{"openalex":"https://openalex.org/W3208874625","doi":"https://doi.org/10.1007/s13721-021-00340-4","mag":"3208874625"},"language":"en","primary_location":{"id":"doi:10.1007/s13721-021-00340-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13721-021-00340-4","pdf_url":null,"source":{"id":"https://openalex.org/S4210178532","display_name":"Network Modeling Analysis in Health Informatics and Bioinformatics","issn_l":"2192-6670","issn":["2192-6670","2192-6662"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310321666","host_organization_name":"Springer Vienna","host_organization_lineage":["https://openalex.org/P4310321666","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Vienna","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Network Modeling Analysis in Health Informatics and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5021389044","display_name":"Aditya Jayasimha","orcid":"https://orcid.org/0000-0003-0740-5695"},"institutions":[{"id":"https://openalex.org/I11880225","display_name":"National Institute of Technology Karnataka","ror":"https://ror.org/01hz4v948","country_code":"IN","type":"education","lineage":["https://openalex.org/I11880225"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Aditya Jayasimha","raw_affiliation_strings":["Department of Information Technology, National Institute of Technology Karnataka, Mangalore, India"],"raw_orcid":"https://orcid.org/0000-0003-0740-5695","affiliations":[{"raw_affiliation_string":"Department of Information Technology, National Institute of Technology Karnataka, Mangalore, India","institution_ids":["https://openalex.org/I11880225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034671552","display_name":"Rahul Mudambi","orcid":null},"institutions":[{"id":"https://openalex.org/I11880225","display_name":"National Institute of Technology Karnataka","ror":"https://ror.org/01hz4v948","country_code":"IN","type":"education","lineage":["https://openalex.org/I11880225"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Rahul Mudambi","raw_affiliation_strings":["Department of Information Technology, National Institute of Technology Karnataka, Mangalore, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Technology, National Institute of Technology Karnataka, Mangalore, India","institution_ids":["https://openalex.org/I11880225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028764069","display_name":"Pablo Jos\u00e9 Pavan","orcid":"https://orcid.org/0000-0002-7588-0503"},"institutions":[{"id":"https://openalex.org/I11880225","display_name":"National Institute of Technology Karnataka","ror":"https://ror.org/01hz4v948","country_code":"IN","type":"education","lineage":["https://openalex.org/I11880225"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"P. Pavan","raw_affiliation_strings":["Department of Information Technology, National Institute of Technology Karnataka, Mangalore, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Technology, National Institute of Technology Karnataka, Mangalore, India","institution_ids":["https://openalex.org/I11880225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074391551","display_name":"B. M. Lokaksha","orcid":null},"institutions":[{"id":"https://openalex.org/I11880225","display_name":"National Institute of Technology Karnataka","ror":"https://ror.org/01hz4v948","country_code":"IN","type":"education","lineage":["https://openalex.org/I11880225"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"B. M. Lokaksha","raw_affiliation_strings":["Department of Information Technology, National Institute of Technology Karnataka, Mangalore, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Technology, National Institute of Technology Karnataka, Mangalore, India","institution_ids":["https://openalex.org/I11880225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024603420","display_name":"Sanjay Bankapur","orcid":"https://orcid.org/0000-0003-3982-3859"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sanjay Bankapur","raw_affiliation_strings":["Department of Computer Science and Engineering, National Institute of Technology Puducherry, Puducherry, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, National Institute of Technology Puducherry, Puducherry, India","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040815462","display_name":"Nagamma Patil","orcid":"https://orcid.org/0000-0001-9924-9559"},"institutions":[{"id":"https://openalex.org/I11880225","display_name":"National Institute of Technology Karnataka","ror":"https://ror.org/01hz4v948","country_code":"IN","type":"education","lineage":["https://openalex.org/I11880225"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Nagamma Patil","raw_affiliation_strings":["Department of Information Technology, National Institute of Technology Karnataka, Mangalore, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Technology, National Institute of Technology Karnataka, Mangalore, India","institution_ids":["https://openalex.org/I11880225"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5021389044"],"corresponding_institution_ids":["https://openalex.org/I11880225"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":null,"fwci":0.1481,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.456585,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"10","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6950282454490662},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.6553707122802734},{"id":"https://openalex.org/keywords/protein-secondary-structure","display_name":"Protein secondary structure","score":0.5999505519866943},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.5992213487625122},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5724796056747437},{"id":"https://openalex.org/keywords/casp","display_name":"CASP","score":0.5649057030677795},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.5584316253662109},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5149348378181458},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4890657365322113},{"id":"https://openalex.org/keywords/hidden-markov-model","display_name":"Hidden Markov model","score":0.4397299587726593},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4374721348285675},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4297691583633423},{"id":"https://openalex.org/keywords/protein-tertiary-structure","display_name":"Protein tertiary structure","score":0.4197225272655487},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4175402820110321},{"id":"https://openalex.org/keywords/recurrent-neural-network","display_name":"Recurrent neural network","score":0.41621652245521545},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.3947431445121765},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3599303662776947},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09040963649749756}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6950282454490662},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.6553707122802734},{"id":"https://openalex.org/C62614982","wikidata":"https://www.wikidata.org/wiki/Q904984","display_name":"Protein secondary structure","level":2,"score":0.5999505519866943},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.5992213487625122},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5724796056747437},{"id":"https://openalex.org/C66153294","wikidata":"https://www.wikidata.org/wiki/Q899291","display_name":"CASP","level":4,"score":0.5649057030677795},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.5584316253662109},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5149348378181458},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4890657365322113},{"id":"https://openalex.org/C23224414","wikidata":"https://www.wikidata.org/wiki/Q176769","display_name":"Hidden Markov model","level":2,"score":0.4397299587726593},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4374721348285675},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4297691583633423},{"id":"https://openalex.org/C75599170","wikidata":"https://www.wikidata.org/wiki/Q898483","display_name":"Protein tertiary structure","level":2,"score":0.4197225272655487},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4175402820110321},{"id":"https://openalex.org/C147168706","wikidata":"https://www.wikidata.org/wiki/Q1457734","display_name":"Recurrent neural network","level":3,"score":0.41621652245521545},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.3947431445121765},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3599303662776947},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09040963649749756},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s13721-021-00340-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13721-021-00340-4","pdf_url":null,"source":{"id":"https://openalex.org/S4210178532","display_name":"Network Modeling Analysis in Health Informatics and Bioinformatics","issn_l":"2192-6670","issn":["2192-6670","2192-6662"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310321666","host_organization_name":"Springer Vienna","host_organization_lineage":["https://openalex.org/P4310321666","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Vienna","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Network Modeling Analysis in Health Informatics and Bioinformatics","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320325375","display_name":"National Institute of Technology Karnataka, Surathkal","ror":"https://ror.org/01hz4v948"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":50,"referenced_works":["https://openalex.org/W1522301498","https://openalex.org/W1538131130","https://openalex.org/W1596947964","https://openalex.org/W1606742816","https://openalex.org/W1665214252","https://openalex.org/W2034121290","https://openalex.org/W2034223886","https://openalex.org/W2044498524","https://openalex.org/W2045344972","https://openalex.org/W2051210555","https://openalex.org/W2059136964","https://openalex.org/W2059685359","https://openalex.org/W2064675550","https://openalex.org/W2064758270","https://openalex.org/W2066507577","https://openalex.org/W2095132973","https://openalex.org/W2096495474","https://openalex.org/W2108702357","https://openalex.org/W2114367267","https://openalex.org/W2114810949","https://openalex.org/W2129588870","https://openalex.org/W2131774270","https://openalex.org/W2137871902","https://openalex.org/W2137983211","https://openalex.org/W2153153865","https://openalex.org/W2153187042","https://openalex.org/W2156876426","https://openalex.org/W2158714788","https://openalex.org/W2279853298","https://openalex.org/W2540069603","https://openalex.org/W2754595644","https://openalex.org/W2765783049","https://openalex.org/W2766736793","https://openalex.org/W2802048770","https://openalex.org/W2802498169","https://openalex.org/W2807692668","https://openalex.org/W2887029338","https://openalex.org/W2888258099","https://openalex.org/W2900952222","https://openalex.org/W2905446269","https://openalex.org/W2938528026","https://openalex.org/W2950577311","https://openalex.org/W2951092885","https://openalex.org/W2959517416","https://openalex.org/W2963136189","https://openalex.org/W2964199361","https://openalex.org/W2987946433","https://openalex.org/W2990172995","https://openalex.org/W3146803896","https://openalex.org/W6600565697"],"related_works":["https://openalex.org/W2059363535","https://openalex.org/W2928838901","https://openalex.org/W4206825711","https://openalex.org/W2292696179","https://openalex.org/W2494604670","https://openalex.org/W2915333504","https://openalex.org/W2114568928","https://openalex.org/W2327175913","https://openalex.org/W2554497004","https://openalex.org/W2052981282"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-07-29T09:40:50.615796","created_date":"2025-10-10T00:00:00"}
