{"id":"https://openalex.org/W4399368488","doi":"https://doi.org/10.1007/s13222-024-00473-6","title":"Integrating FAIR Experimental Metadata for Multi-omics Data Analysis","display_name":"Integrating FAIR Experimental Metadata for Multi-omics Data Analysis","publication_year":2024,"publication_date":"2024-06-05","ids":{"openalex":"https://openalex.org/W4399368488","doi":"https://doi.org/10.1007/s13222-024-00473-6"},"language":"en","primary_location":{"id":"doi:10.1007/s13222-024-00473-6","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s13222-024-00473-6","pdf_url":"https://link.springer.com/content/pdf/10.1007/s13222-024-00473-6.pdf","source":{"id":"https://openalex.org/S73012565","display_name":"Datenbank-Spektrum","issn_l":"1610-1995","issn":["1610-1995","1618-2162"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Datenbank-Spektrum","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s13222-024-00473-6.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009863366","display_name":"Gajendra Doniparthi","orcid":"https://orcid.org/0009-0005-5417-2275"},"institutions":[{"id":"https://openalex.org/I4387152675","display_name":"Rheinland-Pf\u00e4lzische Technische Universit\u00e4t Kaiserslautern-Landau","ror":"https://ror.org/01qrts582","country_code":null,"type":"education","lineage":["https://openalex.org/I4387152675"]},{"id":"https://openalex.org/I153267046","display_name":"University of Kaiserslautern","ror":"https://ror.org/04zrf7b53","country_code":"DE","type":"education","lineage":["https://openalex.org/I153267046"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Gajendra Doniparthi","raw_affiliation_strings":["Heterogeneous Information Systems, RPTU Kaiserslautern Landau, Paul-Ehrlich-Strasse\u00a023, 67663, Kaiserslautern, Rheinland-Pfalz, Germany"],"affiliations":[{"raw_affiliation_string":"Heterogeneous Information Systems, RPTU Kaiserslautern Landau, Paul-Ehrlich-Strasse\u00a023, 67663, Kaiserslautern, Rheinland-Pfalz, Germany","institution_ids":["https://openalex.org/I153267046","https://openalex.org/I4387152675"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091469086","display_name":"Timo M\u00fchlhaus","orcid":"https://orcid.org/0000-0003-3925-6778"},"institutions":[{"id":"https://openalex.org/I4387152675","display_name":"Rheinland-Pf\u00e4lzische Technische Universit\u00e4t Kaiserslautern-Landau","ror":"https://ror.org/01qrts582","country_code":null,"type":"education","lineage":["https://openalex.org/I4387152675"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Timo M\u00fchlhaus","raw_affiliation_strings":["Computational Systems Biology, RPTU Kaiserslautern Landau, Paul-Ehrlich-Strasse\u00a023, 67663, Kaiserslautern, Rheinland-Pfalz, Germany"],"affiliations":[{"raw_affiliation_string":"Computational Systems Biology, RPTU Kaiserslautern Landau, Paul-Ehrlich-Strasse\u00a023, 67663, Kaiserslautern, Rheinland-Pfalz, Germany","institution_ids":["https://openalex.org/I4387152675"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023255725","display_name":"Stefan De\u00dfloch","orcid":"https://orcid.org/0000-0002-1816-3049"},"institutions":[{"id":"https://openalex.org/I153267046","display_name":"University of Kaiserslautern","ror":"https://ror.org/04zrf7b53","country_code":"DE","type":"education","lineage":["https://openalex.org/I153267046"]},{"id":"https://openalex.org/I4387152675","display_name":"Rheinland-Pf\u00e4lzische Technische Universit\u00e4t Kaiserslautern-Landau","ror":"https://ror.org/01qrts582","country_code":null,"type":"education","lineage":["https://openalex.org/I4387152675"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stefan De\u00dfloch","raw_affiliation_strings":["Heterogeneous Information Systems, RPTU Kaiserslautern Landau, Paul-Ehrlich-Strasse\u00a023, 67663, Kaiserslautern, Rheinland-Pfalz, Germany"],"affiliations":[{"raw_affiliation_string":"Heterogeneous Information Systems, RPTU Kaiserslautern Landau, Paul-Ehrlich-Strasse\u00a023, 67663, Kaiserslautern, Rheinland-Pfalz, Germany","institution_ids":["https://openalex.org/I153267046","https://openalex.org/I4387152675"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5009863366"],"corresponding_institution_ids":["https://openalex.org/I153267046","https://openalex.org/I4387152675"],"apc_list":{"value":2380,"currency":"EUR","value_usd":2890},"apc_paid":{"value":2380,"currency":"EUR","value_usd":2890},"fwci":2.5777,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.90816836,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"24","issue":"2","first_page":"107","last_page":"115"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9675999879837036,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rdm","display_name":"RDM","score":0.9004297256469727},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.8454218506813049},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7267236113548279},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5823701620101929},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.5520685315132141},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.5517277717590332},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.45751944184303284},{"id":"https://openalex.org/keywords/digital-data","display_name":"Digital data","score":0.4165961444377899},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3053486943244934},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.29918259382247925},{"id":"https://openalex.org/keywords/data-transmission","display_name":"Data transmission","score":0.10086777806282043}],"concepts":[{"id":"https://openalex.org/C114965421","wikidata":"https://www.wikidata.org/wiki/Q2069955","display_name":"RDM","level":2,"score":0.9004297256469727},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.8454218506813049},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7267236113548279},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5823701620101929},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.5520685315132141},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.5517277717590332},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.45751944184303284},{"id":"https://openalex.org/C2778864079","wikidata":"https://www.wikidata.org/wiki/Q173285","display_name":"Digital data","level":3,"score":0.4165961444377899},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3053486943244934},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.29918259382247925},{"id":"https://openalex.org/C557945733","wikidata":"https://www.wikidata.org/wiki/Q389772","display_name":"Data transmission","level":2,"score":0.10086777806282043},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s13222-024-00473-6","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s13222-024-00473-6","pdf_url":"https://link.springer.com/content/pdf/10.1007/s13222-024-00473-6.pdf","source":{"id":"https://openalex.org/S73012565","display_name":"Datenbank-Spektrum","issn_l":"1610-1995","issn":["1610-1995","1618-2162"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Datenbank-Spektrum","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1007/s13222-024-00473-6","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s13222-024-00473-6","pdf_url":"https://link.springer.com/content/pdf/10.1007/s13222-024-00473-6.pdf","source":{"id":"https://openalex.org/S73012565","display_name":"Datenbank-Spektrum","issn_l":"1610-1995","issn":["1610-1995","1618-2162"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Datenbank-Spektrum","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.6100000143051147}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4399368488.pdf"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1907286193","https://openalex.org/W2069928158","https://openalex.org/W2094397891","https://openalex.org/W2097453652","https://openalex.org/W2119029832","https://openalex.org/W2122344857","https://openalex.org/W2132609595","https://openalex.org/W2140990683","https://openalex.org/W2141297584","https://openalex.org/W2146722981","https://openalex.org/W2171214502","https://openalex.org/W2302501749","https://openalex.org/W2549618915","https://openalex.org/W2573125552","https://openalex.org/W2743021819","https://openalex.org/W2934450419","https://openalex.org/W2985897872","https://openalex.org/W3003192283","https://openalex.org/W3013553122","https://openalex.org/W3125261728","https://openalex.org/W3196363549","https://openalex.org/W3211191624","https://openalex.org/W4307361499","https://openalex.org/W4315646333","https://openalex.org/W4387564010","https://openalex.org/W6894108278","https://openalex.org/W6931499891"],"related_works":["https://openalex.org/W4386337321","https://openalex.org/W4200117892","https://openalex.org/W2532627110","https://openalex.org/W2946690138","https://openalex.org/W3184289340","https://openalex.org/W4206452999","https://openalex.org/W2082577974","https://openalex.org/W2247121396","https://openalex.org/W2142409620","https://openalex.org/W2133374725"],"abstract_inverted_index":{"Abstract":[0],"The":[1,139],"technological":[2],"advancements":[3],"in":[4,9],"bio-science":[5],"research":[6,36,44,131,166],"are":[7,52],"resulting":[8],"the":[10,35,42,67,143],"generation":[11],"of":[12,15,145,154],"vast":[13],"amounts":[14],"complex":[16,94],"and":[17,40,55,62,91,104,147],"heterogeneous":[18],"data":[19,70,95,103,111],"sets":[20,71],"from":[21,73,129,157],"individual":[22,130],"studies.":[23],"Efficient":[24],"Research":[25,162],"Data":[26],"Management":[27],"solutions":[28],"based":[29],"on":[30,142],"FAIR":[31],"principles":[32],"can":[33],"guide":[34],"groups":[37,132],"toward":[38],"standardizing":[39],"packaging":[41],"study-specific":[43],"results":[45],"into":[46],"uniquely":[47],"identifiable":[48],"digital":[49,159],"objects":[50,160],"that":[51,87,125,133,150],"easily":[53],"traceable":[54],"identifiable,":[56],"leading":[57],"to":[58,65,80],"knowledge":[59],"discovery,":[60],"collaboration,":[61],"innovation.":[63],"However,":[64],"explore":[66],"inter-dependencies":[68],"among":[69],"originating":[72],"different":[74],"study":[75],"disciplines,":[76],"it":[77],"is":[78,141],"crucial":[79],"deploy":[81],"a":[82,119],"generic":[83],"data-centric":[84],"RDM":[85],"solution":[86,98],"overcomes":[88],"inherent":[89],"challenges":[90],"helps":[92],"manage":[93],"sets.":[96],"This":[97],"should":[99],"respect":[100],"participating":[101,165],"groups\u2019":[102],"security":[105],"policies":[106],"while":[107],"providing":[108],"an":[109],"integrated":[110],"view.":[112],"In":[113],"this":[114],"paper,":[115],"we":[116],"introduce":[117],",":[118],"cloud-native":[120],"search":[121],"&amp;":[122],"exploration":[123],"application":[124],"integrates":[126],"experimental":[127,155],"metadata":[128,156],"have":[134],"deployed":[135],"PLANTdataHUB":[136,146],"(FAIR-RDM)":[137],"solution.":[138],"focus":[140],"parts":[144],"ARC":[148],"Registry":[149],"facilitate":[151],"near-real-time":[152],"integration":[153],"standardized":[158],"(Annotated":[161],"Contexts)":[163],"across":[164],"groups.":[167]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2}],"updated_date":"2025-11-06T06:51:31.235846","created_date":"2025-10-10T00:00:00"}
