{"id":"https://openalex.org/W4412673819","doi":"https://doi.org/10.1007/s13198-025-02894-2","title":"Gpu-enhanced scalable methods for genome sequence feature extraction and clustering","display_name":"Gpu-enhanced scalable methods for genome sequence feature extraction and clustering","publication_year":2025,"publication_date":"2025-07-27","ids":{"openalex":"https://openalex.org/W4412673819","doi":"https://doi.org/10.1007/s13198-025-02894-2"},"language":"en","primary_location":{"id":"doi:10.1007/s13198-025-02894-2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13198-025-02894-2","pdf_url":null,"source":{"id":"https://openalex.org/S40280859","display_name":"International Journal of Systems Assurance Engineering and Management","issn_l":"0975-6809","issn":["0975-6809","0976-4348"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of System Assurance Engineering and Management","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077947342","display_name":"Preeti Jha","orcid":"https://orcid.org/0000-0002-8756-4065"},"institutions":[{"id":"https://openalex.org/I64295750","display_name":"Indian Institute of Technology Indore","ror":"https://ror.org/01hhf7w52","country_code":"IN","type":"education","lineage":["https://openalex.org/I64295750"]},{"id":"https://openalex.org/I875944469","display_name":"Koneru Lakshmaiah Education Foundation","ror":"https://ror.org/02k949197","country_code":"IN","type":"education","lineage":["https://openalex.org/I875944469"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Preeti Jha","raw_affiliation_strings":["Department of Computer Science and Engineering, Indian Institute of Technology Indore, Indore, Madhya Pradesh, 452020, India","Department of Computer Science and Engineering, Koneru Lakshmaiah Education Foundation, Hyderabad, Telangana, 500043, India"],"raw_orcid":"https://orcid.org/0000-0002-8756-4065","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Indian Institute of Technology Indore, Indore, Madhya Pradesh, 452020, India","institution_ids":["https://openalex.org/I64295750"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Koneru Lakshmaiah Education Foundation, Hyderabad, Telangana, 500043, India","institution_ids":["https://openalex.org/I875944469"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015363446","display_name":"Aruna Tiwari","orcid":"https://orcid.org/0000-0002-0394-0327"},"institutions":[{"id":"https://openalex.org/I64295750","display_name":"Indian Institute of Technology Indore","ror":"https://ror.org/01hhf7w52","country_code":"IN","type":"education","lineage":["https://openalex.org/I64295750"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Aruna Tiwari","raw_affiliation_strings":["Department of Computer Science and Engineering, Indian Institute of Technology Indore, Indore, Madhya Pradesh, 452020, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Indian Institute of Technology Indore, Indore, Madhya Pradesh, 452020, India","institution_ids":["https://openalex.org/I64295750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086331021","display_name":"Neha Bharill","orcid":"https://orcid.org/0000-0002-2202-3647"},"institutions":[{"id":"https://openalex.org/I4210164565","display_name":"Mahindra University","ror":"https://ror.org/05751b994","country_code":"IN","type":"education","lineage":["https://openalex.org/I4210164565"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Neha Bharill","raw_affiliation_strings":["Department of Computer Science and Engineering, Ecole Centrale School of Engineering, Mahindra University, Hyderabad, Telangana, 500043, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Ecole Centrale School of Engineering, Mahindra University, Hyderabad, Telangana, 500043, India","institution_ids":["https://openalex.org/I4210164565"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052390193","display_name":"Milind B. Ratnaparkhe","orcid":"https://orcid.org/0000-0002-1607-7876"},"institutions":[{"id":"https://openalex.org/I4210166498","display_name":"Indian Institute of Soybean Research","ror":"https://ror.org/05vm6r550","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210166498"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Milind Ratnaparkhe","raw_affiliation_strings":["Biotechnology, ICAR-Indian Institute of Soybean Research, Indore, Madhya Pradesh, 452001, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biotechnology, ICAR-Indian Institute of Soybean Research, Indore, Madhya Pradesh, 452001, India","institution_ids":["https://openalex.org/I4210166498"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019008348","display_name":"Om Prakash Patel","orcid":"https://orcid.org/0000-0002-5295-4880"},"institutions":[{"id":"https://openalex.org/I4210164565","display_name":"Mahindra University","ror":"https://ror.org/05751b994","country_code":"IN","type":"education","lineage":["https://openalex.org/I4210164565"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Om Prakash Patel","raw_affiliation_strings":["Department of Computer Science and Engineering, Ecole Centrale School of Engineering, Mahindra University, Hyderabad, Telangana, 500043, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Ecole Centrale School of Engineering, Mahindra University, Hyderabad, Telangana, 500043, India","institution_ids":["https://openalex.org/I4210164565"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5077947342"],"corresponding_institution_ids":["https://openalex.org/I64295750","https://openalex.org/I875944469"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.08055049,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"16","issue":"11","first_page":"3800","last_page":"3815"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.7045980095863342},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.655248761177063},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5713667869567871},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4937780797481537},{"id":"https://openalex.org/keywords/feature-extraction","display_name":"Feature extraction","score":0.47548118233680725},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4392079710960388},{"id":"https://openalex.org/keywords/extraction","display_name":"Extraction (chemistry)","score":0.4228241443634033},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.41736310720443726},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3981166481971741},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.38614705204963684},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3699708580970764},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1695237159729004},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.11239844560623169},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09349328279495239},{"id":"https://openalex.org/keywords/chromatography","display_name":"Chromatography","score":0.08311650156974792},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.06382906436920166}],"concepts":[{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.7045980095863342},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.655248761177063},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5713667869567871},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4937780797481537},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.47548118233680725},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4392079710960388},{"id":"https://openalex.org/C4725764","wikidata":"https://www.wikidata.org/wiki/Q844704","display_name":"Extraction (chemistry)","level":2,"score":0.4228241443634033},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.41736310720443726},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3981166481971741},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.38614705204963684},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3699708580970764},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1695237159729004},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.11239844560623169},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09349328279495239},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.08311650156974792},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.06382906436920166},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s13198-025-02894-2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s13198-025-02894-2","pdf_url":null,"source":{"id":"https://openalex.org/S40280859","display_name":"International Journal of Systems Assurance Engineering and Management","issn_l":"0975-6809","issn":["0975-6809","0976-4348"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of System Assurance Engineering and Management","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":40,"referenced_works":["https://openalex.org/W323404752","https://openalex.org/W1992763738","https://openalex.org/W2012986985","https://openalex.org/W2013357328","https://openalex.org/W2016493165","https://openalex.org/W2040042046","https://openalex.org/W2058063871","https://openalex.org/W2100156993","https://openalex.org/W2106852142","https://openalex.org/W2120593379","https://openalex.org/W2123159591","https://openalex.org/W2127615881","https://openalex.org/W2128170758","https://openalex.org/W2131573416","https://openalex.org/W2141012957","https://openalex.org/W2144504271","https://openalex.org/W2146108696","https://openalex.org/W2153233077","https://openalex.org/W2167519901","https://openalex.org/W2301166038","https://openalex.org/W2542194815","https://openalex.org/W2558561667","https://openalex.org/W2579201556","https://openalex.org/W2584612194","https://openalex.org/W2749408386","https://openalex.org/W2763684694","https://openalex.org/W2911008619","https://openalex.org/W2913613269","https://openalex.org/W2949329924","https://openalex.org/W3143682269","https://openalex.org/W3195939996","https://openalex.org/W4210504015","https://openalex.org/W4214662895","https://openalex.org/W4365150760","https://openalex.org/W4366598349","https://openalex.org/W4366606150","https://openalex.org/W4386884279","https://openalex.org/W4406804187","https://openalex.org/W4407191427","https://openalex.org/W4408275974"],"related_works":["https://openalex.org/W2389214306","https://openalex.org/W2965083567","https://openalex.org/W4235240664","https://openalex.org/W1838576100","https://openalex.org/W2095886385","https://openalex.org/W2889616422","https://openalex.org/W2089704382","https://openalex.org/W1983399550","https://openalex.org/W97075385","https://openalex.org/W2357523926"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-06-13T06:13:01.061226","created_date":"2025-10-10T00:00:00"}