{"id":"https://openalex.org/W3010078086","doi":"https://doi.org/10.1007/s12650-020-00635-0","title":"VEGA: visual comparison of phylogenetic trees for evolutionary genome analysis (ChinaVis 2019)","display_name":"VEGA: visual comparison of phylogenetic trees for evolutionary genome analysis (ChinaVis 2019)","publication_year":2020,"publication_date":"2020-03-04","ids":{"openalex":"https://openalex.org/W3010078086","doi":"https://doi.org/10.1007/s12650-020-00635-0","mag":"3010078086"},"language":"en","primary_location":{"id":"doi:10.1007/s12650-020-00635-0","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s12650-020-00635-0","pdf_url":null,"source":{"id":"https://openalex.org/S10355277","display_name":"Journal of Visualization","issn_l":"1343-8875","issn":["1343-8875","1875-8975"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Visualization","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://kops.uni-konstanz.de/server/api/core/bitstreams/a7823ace-9250-4326-9dac-401004ff6aa6/content","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053361220","display_name":"Tong Ge","orcid":"https://orcid.org/0000-0002-6758-9652"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Tong Ge","raw_affiliation_strings":["Shandong University, Jinan, China"],"affiliations":[{"raw_affiliation_string":"Shandong University, Jinan, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015068750","display_name":"Yonghua L\u00fc","orcid":"https://orcid.org/0000-0003-1049-8474"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yonghua Lu","raw_affiliation_strings":["Shenzhen Investigation and Research Institute Co., Ltd, Shenzhen, China"],"affiliations":[{"raw_affiliation_string":"Shenzhen Investigation and Research Institute Co., Ltd, Shenzhen, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049188592","display_name":"Kecheng Lu","orcid":"https://orcid.org/0000-0001-5990-3296"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kecheng Lu","raw_affiliation_strings":["Shandong University, Jinan, China"],"affiliations":[{"raw_affiliation_string":"Shandong University, Jinan, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068526974","display_name":"Yunhai Wang","orcid":"https://orcid.org/0000-0003-0059-6580"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yunhai Wang","raw_affiliation_strings":["Shandong University, Jinan, China"],"affiliations":[{"raw_affiliation_string":"Shandong University, Jinan, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100352324","display_name":"Xin Liu","orcid":"https://orcid.org/0000-0003-3256-2940"},"institutions":[{"id":"https://openalex.org/I100135526","display_name":"BGI Group (China)","ror":"https://ror.org/045pn2j94","country_code":"CN","type":"company","lineage":["https://openalex.org/I100135526"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Liu","raw_affiliation_strings":["BGI, Shenzhen, China"],"affiliations":[{"raw_affiliation_string":"BGI, Shenzhen, China","institution_ids":["https://openalex.org/I100135526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005647036","display_name":"Zhanglin Cheng","orcid":"https://orcid.org/0000-0002-3360-2679"},"institutions":[{"id":"https://openalex.org/I158809036","display_name":"Shenzhen Institute of Information Technology","ror":"https://ror.org/03wrf9427","country_code":"CN","type":"education","lineage":["https://openalex.org/I158809036"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhanglin Cheng","raw_affiliation_strings":["SIAT, Shenzhen, China"],"affiliations":[{"raw_affiliation_string":"SIAT, Shenzhen, China","institution_ids":["https://openalex.org/I158809036"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100613649","display_name":"Yi Chen","orcid":"https://orcid.org/0000-0002-4141-0554"},"institutions":[{"id":"https://openalex.org/I179026463","display_name":"Beijing Technology and Business University","ror":"https://ror.org/013e0zm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I179026463"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yi Chen","raw_affiliation_strings":["Beijing Key Laboratory of Big Data Technology for Food Safety, Beijing Technology and Business University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Beijing Key Laboratory of Big Data Technology for Food Safety, Beijing Technology and Business University, Beijing, China","institution_ids":["https://openalex.org/I179026463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036489223","display_name":"Oliver Deu\u00dfen","orcid":"https://orcid.org/0000-0001-5803-2185"},"institutions":[{"id":"https://openalex.org/I189712700","display_name":"University of Konstanz","ror":"https://ror.org/0546hnb39","country_code":"DE","type":"education","lineage":["https://openalex.org/I189712700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Oliver Deussen","raw_affiliation_strings":["University of Konstanz, Konstanz, Germany"],"affiliations":[{"raw_affiliation_string":"University of Konstanz, Konstanz, Germany","institution_ids":["https://openalex.org/I189712700"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010714340","display_name":"Baoquan Chen","orcid":"https://orcid.org/0000-0003-4702-036X"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Baoquan Chen","raw_affiliation_strings":["Shandong University, Jinan, China"],"affiliations":[{"raw_affiliation_string":"Shandong University, Jinan, China","institution_ids":["https://openalex.org/I154099455"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5053361220"],"corresponding_institution_ids":["https://openalex.org/I154099455"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":null,"fwci":0.3487,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.71018708,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"23","issue":"3","first_page":"523","last_page":"537"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10487","display_name":"Plant and animal studies","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10487","display_name":"Plant and animal studies","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9923999905586243,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10895","display_name":"Species Distribution and Climate Change","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/2302","display_name":"Ecological Modeling"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.7801282405853271},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.5963695645332336},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5567236542701721},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5214511752128601},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.5203292369842529},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.42620614171028137},{"id":"https://openalex.org/keywords/locus","display_name":"Locus (genetics)","score":0.42145276069641113},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4191145598888397},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3728911876678467},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.3212701082229614},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2990034520626068},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2587912678718567},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.23301401734352112},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.13882815837860107}],"concepts":[{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.7801282405853271},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.5963695645332336},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5567236542701721},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5214511752128601},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.5203292369842529},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.42620614171028137},{"id":"https://openalex.org/C84597430","wikidata":"https://www.wikidata.org/wiki/Q106227","display_name":"Locus (genetics)","level":3,"score":0.42145276069641113},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4191145598888397},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3728911876678467},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3212701082229614},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2990034520626068},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2587912678718567},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.23301401734352112},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.13882815837860107},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/s12650-020-00635-0","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s12650-020-00635-0","pdf_url":null,"source":{"id":"https://openalex.org/S10355277","display_name":"Journal of Visualization","issn_l":"1343-8875","issn":["1343-8875","1875-8975"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Visualization","raw_type":"journal-article"},{"id":"pmh:oai:kops.uni-konstanz.de:123456789/49023","is_oa":true,"landing_page_url":"http://nbn-resolving.de/urn:nbn:de:bsz:352-2-mmb2f60e2juc6","pdf_url":"https://kops.uni-konstanz.de/server/api/core/bitstreams/a7823ace-9250-4326-9dac-401004ff6aa6/content","source":{"id":"https://openalex.org/S4306401487","display_name":"KOPS (University of Konstanz)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I189712700","host_organization_name":"University of Konstanz","host_organization_lineage":["https://openalex.org/I189712700"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Visualization. Springer. 2020, 23(3), pp. 523-537. ISSN 1343-8875. eISSN 1875-8975. Available under: doi: 10.1007/s12650-020-00635-0","raw_type":"doc-type:Text"}],"best_oa_location":{"id":"pmh:oai:kops.uni-konstanz.de:123456789/49023","is_oa":true,"landing_page_url":"http://nbn-resolving.de/urn:nbn:de:bsz:352-2-mmb2f60e2juc6","pdf_url":"https://kops.uni-konstanz.de/server/api/core/bitstreams/a7823ace-9250-4326-9dac-401004ff6aa6/content","source":{"id":"https://openalex.org/S4306401487","display_name":"KOPS (University of Konstanz)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I189712700","host_organization_name":"University of Konstanz","host_organization_lineage":["https://openalex.org/I189712700"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Visualization. Springer. 2020, 23(3), pp. 523-537. ISSN 1343-8875. eISSN 1875-8975. Available under: doi: 10.1007/s12650-020-00635-0","raw_type":"doc-type:Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1023919524","display_name":null,"funder_award_id":", Grant","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1121271761","display_name":null,"funder_award_id":"Program","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1172909539","display_name":null,"funder_award_id":"BKBD-2017KF02","funder_id":"https://openalex.org/F4320323378","funder_display_name":"Beijing Technology and Business University"},{"id":"https://openalex.org/G2010386442","display_name":null,"funder_award_id":"201704","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2902493880","display_name":null,"funder_award_id":"JSGG20170412170711532","funder_id":"https://openalex.org/F4320326705","funder_display_name":"Science, Technology and Innovation Commission of Shenzhen Municipality"},{"id":"https://openalex.org/G2981938667","display_name":null,"funder_award_id":"Shenzhen","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5417289465","display_name":null,"funder_award_id":"21707115","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5844569105","display_name":null,"funder_award_id":"61602273","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5939423041","display_name":null,"funder_award_id":"Technology","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7033253288","display_name":null,"funder_award_id":"Grants","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7234438289","display_name":null,"funder_award_id":"61772315","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320323378","display_name":"Beijing Technology and Business University","ror":"https://ror.org/013e0zm98"},{"id":"https://openalex.org/F4320326705","display_name":"Science, Technology and Innovation Commission of Shenzhen Municipality","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3010078086.pdf","grobid_xml":"https://content.openalex.org/works/W3010078086.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W1557284415","https://openalex.org/W1965621126","https://openalex.org/W1968387999","https://openalex.org/W1990095531","https://openalex.org/W1994735599","https://openalex.org/W2009569945","https://openalex.org/W2020098460","https://openalex.org/W2023357311","https://openalex.org/W2024278789","https://openalex.org/W2064657914","https://openalex.org/W2074494141","https://openalex.org/W2088378580","https://openalex.org/W2090106709","https://openalex.org/W2097341408","https://openalex.org/W2097706568","https://openalex.org/W2098241120","https://openalex.org/W2105729200","https://openalex.org/W2106588364","https://openalex.org/W2110899053","https://openalex.org/W2116338770","https://openalex.org/W2117131162","https://openalex.org/W2119180969","https://openalex.org/W2128016314","https://openalex.org/W2142014575","https://openalex.org/W2148683465","https://openalex.org/W2149082178","https://openalex.org/W2149441684","https://openalex.org/W2150457970","https://openalex.org/W2156974804","https://openalex.org/W2158453355","https://openalex.org/W2287520872","https://openalex.org/W4255938757"],"related_works":["https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W2397952901","https://openalex.org/W2362218761","https://openalex.org/W2113708670","https://openalex.org/W2062354928","https://openalex.org/W2088120817","https://openalex.org/W2158340599"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-04-04T08:04:53.788161","created_date":"2025-10-10T00:00:00"}