{"id":"https://openalex.org/W4383737612","doi":"https://doi.org/10.1007/s12145-023-01045-0","title":"Utility of the Python package Geoweaver_cwl for improving workflow reusability: an illustration with multidisciplinary use cases","display_name":"Utility of the Python package Geoweaver_cwl for improving workflow reusability: an illustration with multidisciplinary use cases","publication_year":2023,"publication_date":"2023-07-10","ids":{"openalex":"https://openalex.org/W4383737612","doi":"https://doi.org/10.1007/s12145-023-01045-0","pmid":"https://pubmed.ncbi.nlm.nih.gov/37636584"},"language":"en","primary_location":{"id":"doi:10.1007/s12145-023-01045-0","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1007/s12145-023-01045-0","pdf_url":"https://link.springer.com/content/pdf/10.1007/s12145-023-01045-0.pdf","source":{"id":"https://openalex.org/S198914822","display_name":"Earth Science Informatics","issn_l":"1865-0473","issn":["1865-0473","1865-0481"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Earth Science Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s12145-023-01045-0.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025876827","display_name":"Amruta Kale","orcid":null},"institutions":[{"id":"https://openalex.org/I155093810","display_name":"University of Idaho","ror":"https://ror.org/03hbp5t65","country_code":"US","type":"education","lineage":["https://openalex.org/I155093810"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Amruta Kale","raw_affiliation_strings":["Department of Computer Science, University of Idaho, Moscow, ID 83844 USA","Department of Computer Science, University of Idaho, Moscow, ID, 83844, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Idaho, Moscow, ID 83844 USA","institution_ids":["https://openalex.org/I155093810"]},{"raw_affiliation_string":"Department of Computer Science, University of Idaho, Moscow, ID, 83844, USA","institution_ids":["https://openalex.org/I155093810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014889794","display_name":"Ziheng Sun","orcid":"https://orcid.org/0000-0001-9810-0023"},"institutions":[{"id":"https://openalex.org/I162714631","display_name":"George Mason University","ror":"https://ror.org/02jqj7156","country_code":"US","type":"education","lineage":["https://openalex.org/I162714631"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ziheng Sun","raw_affiliation_strings":["Center for Spatial Information Science and Systems, George Mason University, Fairfax, VA 22030 USA","Department of Geography and Geoinformation Science, George Mason University, Fairfax, VA 22030 USA","Department of Geography and Geoinformation Science, George Mason University, Fairfax, VA, 22030, USA","Center for Spatial Information Science and Systems, George Mason University, Fairfax, VA, 22030, USA"],"affiliations":[{"raw_affiliation_string":"Center for Spatial Information Science and Systems, George Mason University, Fairfax, VA 22030 USA","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"Department of Geography and Geoinformation Science, George Mason University, Fairfax, VA 22030 USA","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"Department of Geography and Geoinformation Science, George Mason University, Fairfax, VA, 22030, USA","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"Center for Spatial Information Science and Systems, George Mason University, Fairfax, VA, 22030, USA","institution_ids":["https://openalex.org/I162714631"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071393418","display_name":"Xiaogang Ma","orcid":"https://orcid.org/0000-0002-9110-7369"},"institutions":[{"id":"https://openalex.org/I155093810","display_name":"University of Idaho","ror":"https://ror.org/03hbp5t65","country_code":"US","type":"education","lineage":["https://openalex.org/I155093810"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaogang Ma","raw_affiliation_strings":["Department of Computer Science, University of Idaho, Moscow, ID 83844 USA","Department of Computer Science, University of Idaho, Moscow, ID, 83844, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Idaho, Moscow, ID 83844 USA","institution_ids":["https://openalex.org/I155093810"]},{"raw_affiliation_string":"Department of Computer Science, University of Idaho, Moscow, ID, 83844, USA","institution_ids":["https://openalex.org/I155093810"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5025876827"],"corresponding_institution_ids":["https://openalex.org/I155093810"],"apc_list":{"value":2690,"currency":"EUR","value_usd":3390},"apc_paid":{"value":2690,"currency":"EUR","value_usd":3390},"fwci":0.5606,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.8054587,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"16","issue":"3","first_page":"2955","last_page":"2961"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9886999726295471,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.908859372138977},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8278522491455078},{"id":"https://openalex.org/keywords/software-portability","display_name":"Software portability","score":0.7699626684188843},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.7671366333961487},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.7056440114974976},{"id":"https://openalex.org/keywords/reusability","display_name":"Reusability","score":0.6475627422332764},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.586410641670227},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.4321233034133911},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.31357842683792114},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.31284481287002563},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.28072038292884827},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.2167498767375946}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.908859372138977},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8278522491455078},{"id":"https://openalex.org/C63000827","wikidata":"https://www.wikidata.org/wiki/Q3080428","display_name":"Software portability","level":2,"score":0.7699626684188843},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.7671366333961487},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.7056440114974976},{"id":"https://openalex.org/C137981799","wikidata":"https://www.wikidata.org/wiki/Q1369184","display_name":"Reusability","level":3,"score":0.6475627422332764},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.586410641670227},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.4321233034133911},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.31357842683792114},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.31284481287002563},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.28072038292884827},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.2167498767375946}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/s12145-023-01045-0","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1007/s12145-023-01045-0","pdf_url":"https://link.springer.com/content/pdf/10.1007/s12145-023-01045-0.pdf","source":{"id":"https://openalex.org/S198914822","display_name":"Earth Science Informatics","issn_l":"1865-0473","issn":["1865-0473","1865-0481"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Earth Science Informatics","raw_type":"journal-article"},{"id":"pmid:37636584","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37636584","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Earth science informatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10450007","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10450007","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10450007/pdf/12145_2023_Article_1045.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Earth Sci Inform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1007/s12145-023-01045-0","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1007/s12145-023-01045-0","pdf_url":"https://link.springer.com/content/pdf/10.1007/s12145-023-01045-0.pdf","source":{"id":"https://openalex.org/S198914822","display_name":"Earth Science Informatics","issn_l":"1865-0473","issn":["1865-0473","1865-0481"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Earth Science Informatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.6399999856948853}],"awards":[{"id":"https://openalex.org/G4765548732","display_name":null,"funder_award_id":"80NSSC21M0028","funder_id":"https://openalex.org/F4320306101","funder_display_name":"National Aeronautics and Space Administration"},{"id":"https://openalex.org/G6405410461","display_name":null,"funder_award_id":"2019609","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306101","display_name":"National Aeronautics and Space Administration","ror":"https://ror.org/027ka1x80"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4383737612.pdf"},"referenced_works_count":13,"referenced_works":["https://openalex.org/W2008985174","https://openalex.org/W2069028640","https://openalex.org/W2106345431","https://openalex.org/W2115570304","https://openalex.org/W2123663722","https://openalex.org/W2136482257","https://openalex.org/W2145154883","https://openalex.org/W2160950721","https://openalex.org/W2762888391","https://openalex.org/W3007283024","https://openalex.org/W4212838933","https://openalex.org/W4367332860","https://openalex.org/W4380924868"],"related_works":["https://openalex.org/W4386889851","https://openalex.org/W2133678176","https://openalex.org/W2901381009","https://openalex.org/W4281656368","https://openalex.org/W4295990858","https://openalex.org/W2129965124","https://openalex.org/W2352677973","https://openalex.org/W4406299096","https://openalex.org/W2084341361","https://openalex.org/W2112885082"],"abstract_inverted_index":{"Computational":[0],"workflows":[1,32,59,69,121],"are":[2,208],"widely":[3],"used":[4],"in":[5,23,177],"data":[6,97],"analysis,":[7],"enabling":[8,71],"automated":[9],"tracking":[10],"of":[11,15,31,77,108,156,174],"steps":[12],"and":[13,21,38,46,70,93,100,106,152,164,168,205],"storage":[14],"provenance":[16],"information,":[17],"leading":[18],"to":[19,50,57,150,185],"innovation":[20],"decision-making":[22],"the":[24,28,84,154,162,171,175],"scientific":[25],"community.":[26],"However,":[27],"growing":[29],"popularity":[30],"has":[33,80],"raised":[34],"concerns":[35],"about":[36],"reproducibility":[37],"reusability":[39],"which":[40,89],"can":[41,183],"hinder":[42],"collaboration":[43],"between":[44],"institutions":[45],"users.":[47],"In":[48,132],"order":[49],"address":[51],"these":[52],"concerns,":[53],"it":[54],"is":[55,83,149,199],"important":[56],"standardize":[58],"or":[60],"provide":[61],"tools":[62,99],"that":[63,79,117,181],"offer":[64],"a":[65,91,114,123,186],"framework":[66,95],"for":[67,96,193],"describing":[68],"computational":[72],"reusability.":[73],"One":[74],"such":[75],"set":[76],"standards":[78],"recently":[81],"emerged":[82],"Common":[85],"Workflow":[86],"Language":[87],"(CWL),":[88],"offers":[90],"robust":[92],"flexible":[94],"analysis":[98],"workflows.":[101],"To":[102],"promote":[103],"portability,":[104],"reproducibility,":[105],"interoperability":[107],"AI/ML":[109,120],"workflows,":[110],"we":[111,135],"developed":[112],"<b><i>geoweaver_cwl</i></b>,":[113],"Python":[115,138],"package":[116,139,176,198],"automatically":[118],"describes":[119],"from":[122,144],"workflow":[124],"management":[125],"system":[126],"(WfMS)":[127],"named":[128],"Geoweaver":[129],"into":[130],"CWL.":[131],"this":[133,157,178],"paper,":[134,179],"test":[136],"our":[137],"on":[140],"multiple":[141],"use":[142],"cases":[143],"different":[145],"domains.":[146],"Our":[147],"objective":[148],"demonstrate":[151],"verify":[153],"utility":[155],"package.":[158],"We":[159],"make":[160],"all":[161],"code":[163],"dataset":[165],"open":[166],"online":[167,202],"briefly":[169],"describe":[170],"experimental":[172],"implementation":[173],"confirming":[180],"<b><i>geoweaver_cwl</i></b>":[182,197],"lead":[184],"well-versed":[187],"AI":[188],"process":[189],"while":[190],"disclosing":[191],"opportunities":[192],"further":[194],"extensions.":[195],"The":[196],"publicly":[200],"released":[201],"at":[203],"https://pypi.org/project/geoweaver-cwl/0.0.1/":[204],"exemplar":[206],"results":[207],"accessible":[209],"at:":[210],"https://github.com/amrutakale08/geoweaver_cwl-usecases.":[211]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2026-03-17T17:19:04.345684","created_date":"2025-10-10T00:00:00"}
