{"id":"https://openalex.org/W2028501901","doi":"https://doi.org/10.1007/s12064-012-0164-1","title":"Prediction of lethal and synthetically lethal knock-outs in regulatory networks","display_name":"Prediction of lethal and synthetically lethal knock-outs in regulatory networks","publication_year":2012,"publication_date":"2012-08-23","ids":{"openalex":"https://openalex.org/W2028501901","doi":"https://doi.org/10.1007/s12064-012-0164-1","mag":"2028501901","pmid":"https://pubmed.ncbi.nlm.nih.gov/22918565"},"language":"en","primary_location":{"id":"doi:10.1007/s12064-012-0164-1","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s12064-012-0164-1","pdf_url":null,"source":{"id":"https://openalex.org/S12148721","display_name":"Theory in Biosciences","issn_l":"1431-7613","issn":["1431-7613","1611-7530"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theory in Biosciences","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/1108.6062","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009284083","display_name":"Gunnar Boldhaus","orcid":null},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Gunnar Boldhaus","raw_affiliation_strings":["Bioinformatics Group, Institute for Computer Science, Universit\u00e4t Leipzig, H\u00e4rtelstra\u00dfe 16-18, 04107, Leipzig, Germany","Universit\u00e4t Leipzig#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Group, Institute for Computer Science, Universit\u00e4t Leipzig, H\u00e4rtelstra\u00dfe 16-18, 04107, Leipzig, Germany","institution_ids":["https://openalex.org/I926574661"]},{"raw_affiliation_string":"Universit\u00e4t Leipzig#TAB#","institution_ids":["https://openalex.org/I926574661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000675053","display_name":"Florian Greil","orcid":null},"institutions":[{"id":"https://openalex.org/I127251866","display_name":"Alfred-Wegener-Institut Helmholtz-Zentrum f\u00fcr Polar- und Meeresforschung","ror":"https://ror.org/032e6b942","country_code":"DE","type":"facility","lineage":["https://openalex.org/I127251866","https://openalex.org/I1305996414"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Florian Greil","raw_affiliation_strings":["Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, 27570, Bremerhaven, Germany","Alfred-Wegener Institute for Polar- and Marine Research"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, 27570, Bremerhaven, Germany","institution_ids":["https://openalex.org/I127251866"]},{"raw_affiliation_string":"Alfred-Wegener Institute for Polar- and Marine Research","institution_ids":["https://openalex.org/I127251866"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072448062","display_name":"Konstantin Klemm","orcid":"https://orcid.org/0000-0002-0855-7474"},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Konstantin Klemm","raw_affiliation_strings":["Bioinformatics Group, Institute for Computer Science, Universit\u00e4t Leipzig, H\u00e4rtelstra\u00dfe 16-18, 04107, Leipzig, Germany","Universit\u00e4t Leipzig#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Group, Institute for Computer Science, Universit\u00e4t Leipzig, H\u00e4rtelstra\u00dfe 16-18, 04107, Leipzig, Germany","institution_ids":["https://openalex.org/I926574661"]},{"raw_affiliation_string":"Universit\u00e4t Leipzig#TAB#","institution_ids":["https://openalex.org/I926574661"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5072448062"],"corresponding_institution_ids":["https://openalex.org/I926574661"],"apc_list":{"value":2290,"currency":"EUR","value_usd":2890},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.08296608,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"132","issue":"1","first_page":"17","last_page":"25"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9776999950408936,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/betweenness-centrality","display_name":"Betweenness centrality","score":0.8578882813453674},{"id":"https://openalex.org/keywords/centrality","display_name":"Centrality","score":0.6637194156646729},{"id":"https://openalex.org/keywords/node","display_name":"Node (physics)","score":0.528785765171051},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5069456100463867},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4810110032558441},{"id":"https://openalex.org/keywords/lethality","display_name":"Lethality","score":0.4639745354652405},{"id":"https://openalex.org/keywords/degree","display_name":"Degree (music)","score":0.4228597581386566},{"id":"https://openalex.org/keywords/mechanism","display_name":"Mechanism (biology)","score":0.4191758334636688},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3981626033782959},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3660358786582947},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.22834280133247375},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2117631733417511},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.1607673168182373}],"concepts":[{"id":"https://openalex.org/C117045392","wikidata":"https://www.wikidata.org/wiki/Q4899215","display_name":"Betweenness centrality","level":3,"score":0.8578882813453674},{"id":"https://openalex.org/C53811970","wikidata":"https://www.wikidata.org/wiki/Q5062194","display_name":"Centrality","level":2,"score":0.6637194156646729},{"id":"https://openalex.org/C62611344","wikidata":"https://www.wikidata.org/wiki/Q1062658","display_name":"Node (physics)","level":2,"score":0.528785765171051},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5069456100463867},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4810110032558441},{"id":"https://openalex.org/C20379349","wikidata":"https://www.wikidata.org/wiki/Q1720706","display_name":"Lethality","level":2,"score":0.4639745354652405},{"id":"https://openalex.org/C2775997480","wikidata":"https://www.wikidata.org/wiki/Q586277","display_name":"Degree (music)","level":2,"score":0.4228597581386566},{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.4191758334636688},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3981626033782959},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3660358786582947},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.22834280133247375},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2117631733417511},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.1607673168182373},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055786","descriptor_name":"Gene Knockout Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055786","descriptor_name":"Gene Knockout Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055786","descriptor_name":"Gene Knockout Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1007/s12064-012-0164-1","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s12064-012-0164-1","pdf_url":null,"source":{"id":"https://openalex.org/S12148721","display_name":"Theory in Biosciences","issn_l":"1431-7613","issn":["1431-7613","1611-7530"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theory in Biosciences","raw_type":"journal-article"},{"id":"pmh:oai:arXiv.org:1108.6062","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1108.6062","pdf_url":"https://arxiv.org/pdf/1108.6062","source":{"id":"https://openalex.org/S4393918464","display_name":"ArXiv.org","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"text"},{"id":"pmid:22918565","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22918565","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theory in biosciences = Theorie in den Biowissenschaften","raw_type":null}],"best_oa_location":{"id":"pmh:oai:arXiv.org:1108.6062","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1108.6062","pdf_url":"https://arxiv.org/pdf/1108.6062","source":{"id":"https://openalex.org/S4393918464","display_name":"ArXiv.org","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":40,"referenced_works":["https://openalex.org/W1598648881","https://openalex.org/W1677575702","https://openalex.org/W1877021405","https://openalex.org/W1913409399","https://openalex.org/W1971224531","https://openalex.org/W1971937094","https://openalex.org/W1975931018","https://openalex.org/W1994540622","https://openalex.org/W2011159055","https://openalex.org/W2017975254","https://openalex.org/W2046355391","https://openalex.org/W2048451896","https://openalex.org/W2053961182","https://openalex.org/W2061425021","https://openalex.org/W2065769502","https://openalex.org/W2072714202","https://openalex.org/W2074683236","https://openalex.org/W2080540350","https://openalex.org/W2088048878","https://openalex.org/W2093342364","https://openalex.org/W2127405536","https://openalex.org/W2130790725","https://openalex.org/W2136559804","https://openalex.org/W2156335342","https://openalex.org/W2158698691","https://openalex.org/W2163384178","https://openalex.org/W2168338628","https://openalex.org/W2169526870","https://openalex.org/W2171707538","https://openalex.org/W2184448426","https://openalex.org/W2951404033","https://openalex.org/W3103071483","https://openalex.org/W3103322334","https://openalex.org/W3161390558","https://openalex.org/W3214669750","https://openalex.org/W4234809691","https://openalex.org/W4235618707","https://openalex.org/W4252874413","https://openalex.org/W4285719527","https://openalex.org/W6686244633"],"related_works":["https://openalex.org/W1973509935","https://openalex.org/W4389076551","https://openalex.org/W2097992793","https://openalex.org/W2107855069","https://openalex.org/W2611574733","https://openalex.org/W2140653560","https://openalex.org/W2348831795","https://openalex.org/W4312461432","https://openalex.org/W2241641394","https://openalex.org/W2514739320"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
