{"id":"https://openalex.org/W4220660638","doi":"https://doi.org/10.1007/s12021-022-09566-7","title":"The Neuron Phenotype Ontology: A FAIR Approach to Proposing and Classifying Neuronal Types","display_name":"The Neuron Phenotype Ontology: A FAIR Approach to Proposing and Classifying Neuronal Types","publication_year":2022,"publication_date":"2022-03-10","ids":{"openalex":"https://openalex.org/W4220660638","doi":"https://doi.org/10.1007/s12021-022-09566-7","pmid":"https://pubmed.ncbi.nlm.nih.gov/35267146"},"language":"en","primary_location":{"id":"doi:10.1007/s12021-022-09566-7","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s12021-022-09566-7","pdf_url":"https://link.springer.com/content/pdf/10.1007/s12021-022-09566-7.pdf","source":{"id":"https://openalex.org/S3444786","display_name":"Neuroinformatics","issn_l":"1539-2791","issn":["1539-2791","1559-0089"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neuroinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s12021-022-09566-7.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5080810417","display_name":"Tom Gillespie","orcid":"https://orcid.org/0000-0002-7509-4801"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas H. Gillespie","raw_affiliation_strings":["Department of Neuroscience, University of California, San Diego, CA, USA","Department of Neuroscience, University of California, San Diego, USA"],"raw_orcid":"https://orcid.org/0000-0002-7509-4801","affiliations":[{"raw_affiliation_string":"Department of Neuroscience, University of California, San Diego, CA, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"Department of Neuroscience, University of California, San Diego, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078768179","display_name":"Shreejoy J. Tripathy","orcid":"https://orcid.org/0000-0002-1007-9061"},"institutions":[{"id":"https://openalex.org/I1338135719","display_name":"Centre for Addiction and Mental Health","ror":"https://ror.org/03e71c577","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1338135719"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Shreejoy J. Tripathy","raw_affiliation_strings":["Department of Physiology, University of Toronto, Toronto, ON, Canada","Department of Psychiatry, University of Toronto, Toronto, ON, Canada","Krembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, Toronto, ON, Canada","Krembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, Toronto, Canada","Department of Psychiatry, University of Toronto, Toronto, Canada","Department of Physiology, University of Toronto, Toronto, Canada"],"raw_orcid":"https://orcid.org/0000-0002-1007-9061","affiliations":[{"raw_affiliation_string":"Department of Physiology, University of Toronto, Toronto, ON, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Department of Psychiatry, University of Toronto, Toronto, ON, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Krembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, Toronto, ON, Canada","institution_ids":["https://openalex.org/I1338135719"]},{"raw_affiliation_string":"Krembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, Toronto, Canada","institution_ids":["https://openalex.org/I1338135719"]},{"raw_affiliation_string":"Department of Psychiatry, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Department of Physiology, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002227583","display_name":"Mohameth Fran\u00e7ois Sy","orcid":"https://orcid.org/0000-0002-4603-9838"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Mohameth Fran\u00e7ois Sy","raw_affiliation_strings":["Blue Brain Project, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), Campus Biotech, 1202, Geneva, Switzerland","Blue Brain Project, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), Campus Biotech, Geneva, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-4603-9838","affiliations":[{"raw_affiliation_string":"Blue Brain Project, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), Campus Biotech, 1202, Geneva, Switzerland","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Blue Brain Project, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), Campus Biotech, Geneva, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061037631","display_name":"Maryann E. Martone","orcid":"https://orcid.org/0000-0002-8406-3871"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Maryann E. Martone","raw_affiliation_strings":["Department of Neuroscience, University of California, San Diego, CA, USA","Department of Neuroscience, University of California, San Diego, USA"],"raw_orcid":"https://orcid.org/0000-0002-8406-3871","affiliations":[{"raw_affiliation_string":"Department of Neuroscience, University of California, San Diego, CA, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"Department of Neuroscience, University of California, San Diego, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048268124","display_name":"Sean Hill","orcid":"https://orcid.org/0000-0001-8055-860X"},"institutions":[{"id":"https://openalex.org/I1338135719","display_name":"Centre for Addiction and Mental Health","ror":"https://ror.org/03e71c577","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1338135719"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CA","CH"],"is_corresponding":true,"raw_author_name":"Sean L. Hill","raw_affiliation_strings":["Blue Brain Project, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), Campus Biotech, 1202, Geneva, Switzerland. sean.hill@epfl.ch","Department of Physiology, University of Toronto, Toronto, ON, Canada. sean.hill@epfl.ch","Department of Psychiatry, University of Toronto, Toronto, ON, Canada. sean.hill@epfl.ch","Krembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, Toronto, ON, Canada. sean.hill@epfl.ch","Blue Brain Project, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), Campus Biotech, Geneva, Switzerland","Department of Physiology, University of Toronto, Toronto, Canada","Krembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, Toronto, Canada","Department of Psychiatry, University of Toronto, Toronto, Canada"],"raw_orcid":"https://orcid.org/0000-0001-8055-860X","affiliations":[{"raw_affiliation_string":"Blue Brain Project, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), Campus Biotech, 1202, Geneva, Switzerland. sean.hill@epfl.ch","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Department of Physiology, University of Toronto, Toronto, ON, Canada. sean.hill@epfl.ch","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Department of Psychiatry, University of Toronto, Toronto, ON, Canada. sean.hill@epfl.ch","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Krembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, Toronto, ON, Canada. sean.hill@epfl.ch","institution_ids":["https://openalex.org/I1338135719"]},{"raw_affiliation_string":"Blue Brain Project, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), Campus Biotech, Geneva, Switzerland","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Department of Physiology, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Krembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, Toronto, Canada","institution_ids":["https://openalex.org/I1338135719"]},{"raw_affiliation_string":"Department of Psychiatry, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5048268124"],"corresponding_institution_ids":["https://openalex.org/I1338135719","https://openalex.org/I185261750","https://openalex.org/I5124864"],"apc_list":{"value":3190,"currency":"EUR","value_usd":4190},"apc_paid":{"value":3190,"currency":"EUR","value_usd":4190},"fwci":2.9046,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.90457194,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"20","issue":"3","first_page":"793","last_page":"809"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9923999905586243,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7113806009292603},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5696600079536438},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.5572108030319214},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.421779990196228},{"id":"https://openalex.org/keywords/clinical-phenotype","display_name":"Clinical phenotype","score":0.41567695140838623},{"id":"https://openalex.org/keywords/neuron","display_name":"Neuron","score":0.4141790270805359},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.36594733595848083},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3637779951095581},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.32803019881248474},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.32376688718795776},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18730056285858154},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.12266099452972412},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08155810832977295}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7113806009292603},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5696600079536438},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.5572108030319214},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.421779990196228},{"id":"https://openalex.org/C3020646490","wikidata":"https://www.wikidata.org/wiki/Q25203551","display_name":"Clinical phenotype","level":4,"score":0.41567695140838623},{"id":"https://openalex.org/C2778794669","wikidata":"https://www.wikidata.org/wiki/Q43054","display_name":"Neuron","level":2,"score":0.4141790270805359},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.36594733595848083},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3637779951095581},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.32803019881248474},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.32376688718795776},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18730056285858154},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.12266099452972412},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08155810832977295},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010320","descriptor_name":"Parvalbumins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010320","descriptor_name":"Parvalbumins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010320","descriptor_name":"Parvalbumins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010320","descriptor_name":"Parvalbumins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010320","descriptor_name":"Parvalbumins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1007/s12021-022-09566-7","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s12021-022-09566-7","pdf_url":"https://link.springer.com/content/pdf/10.1007/s12021-022-09566-7.pdf","source":{"id":"https://openalex.org/S3444786","display_name":"Neuroinformatics","issn_l":"1539-2791","issn":["1539-2791","1559-0089"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neuroinformatics","raw_type":"journal-article"},{"id":"pmid:35267146","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35267146","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neuroinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9547803","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9547803","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neuroinformatics","raw_type":"Text"},{"id":"pmh:oai:escholarship.org:ark:/13030/qt2z6495qn","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/2z6495qn","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Neuroinformatics, vol 20, iss 3","raw_type":"article"},{"id":"pmh:oai:infoscience.epfl.ch:293014","is_oa":true,"landing_page_url":"https://infoscience.epfl.ch/handle/20.500.14299/186705","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"WoS","raw_type":"research article"}],"best_oa_location":{"id":"doi:10.1007/s12021-022-09566-7","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s12021-022-09566-7","pdf_url":"https://link.springer.com/content/pdf/10.1007/s12021-022-09566-7.pdf","source":{"id":"https://openalex.org/S3444786","display_name":"Neuroinformatics","issn_l":"1539-2791","issn":["1539-2791","1559-0089"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neuroinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8413540490","display_name":null,"funder_award_id":"MH111099","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320320915","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052"},{"id":"https://openalex.org/F4320322353","display_name":"Krembil Foundation","ror":"https://ror.org/037svw098"},{"id":"https://openalex.org/F4320331149","display_name":"Board of the Swiss Federal Institutes of Technology","ror":"https://ror.org/01rvn4p91"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4220660638.pdf","grobid_xml":"https://content.openalex.org/works/W4220660638.grobid-xml"},"referenced_works_count":33,"referenced_works":["https://openalex.org/W1921182138","https://openalex.org/W1970719523","https://openalex.org/W1995031373","https://openalex.org/W1999055090","https://openalex.org/W2004884668","https://openalex.org/W2041848975","https://openalex.org/W2043935419","https://openalex.org/W2045949197","https://openalex.org/W2058660484","https://openalex.org/W2062450961","https://openalex.org/W2087058693","https://openalex.org/W2116034137","https://openalex.org/W2163383667","https://openalex.org/W2197221464","https://openalex.org/W2302501749","https://openalex.org/W2462007197","https://openalex.org/W2510746232","https://openalex.org/W2612519453","https://openalex.org/W2744478946","https://openalex.org/W2751012569","https://openalex.org/W2766078734","https://openalex.org/W2776359697","https://openalex.org/W2922945672","https://openalex.org/W2969948459","https://openalex.org/W2979981663","https://openalex.org/W3174278278","https://openalex.org/W3210074521","https://openalex.org/W4213108508","https://openalex.org/W4393557647","https://openalex.org/W6633480196","https://openalex.org/W6650321799","https://openalex.org/W6665378515","https://openalex.org/W6672248444"],"related_works":["https://openalex.org/W3164771895","https://openalex.org/W29071608","https://openalex.org/W2161088626","https://openalex.org/W2604464132","https://openalex.org/W3029893540","https://openalex.org/W2314682585","https://openalex.org/W2313584493","https://openalex.org/W2135667114","https://openalex.org/W2794847428","https://openalex.org/W2110968082"],"abstract_inverted_index":{"The":[0,25,56,150],"challenge":[1],"of":[2,9,44,50,100],"defining":[3],"and":[4,19,38,46,75,129,136,162,198,220],"cataloging":[5],"the":[6,10,53,98,120,172,209,216,226],"building":[7],"blocks":[8],"brain":[11],"requires":[12],"a":[13,110,127,147,153,176],"standardized":[14,128],"approach":[15,131],"to":[16,89,194,203],"naming":[17,133,168],"neurons":[18,51,192],"organizing":[20,157],"knowledge":[21,118,158,177,205,211],"about":[22,159],"their":[23,138],"properties.":[24,200],"US":[26],"Brain":[27,36],"Initiative":[28],"Cell":[29,33],"Census":[30],"Network,":[31],"Human":[32],"Atlas,":[34],"Blue":[35],"Project,":[37],"others":[39],"are":[40,72,94],"generating":[41],"vast":[42],"amounts":[43],"data":[45,188],"characterizing":[47],"large":[48],"numbers":[49],"throughout":[52],"nervous":[54],"system.":[55],"neuroscientific":[57],"literature":[58],"contains":[59],"many":[60,90],"neuron":[61,167,183,221],"names":[62,222],"(e.g.":[63],"parvalbumin-positive":[64],"interneuron":[65],"or":[66],"layer":[67],"5":[68],"pyramidal":[69],"cell)":[70],"that":[71,93,125,190,208],"commonly":[73,223],"used":[74,224],"generally":[76],"accepted.":[77],"However,":[78],"it":[79],"is":[80],"often":[81],"unclear":[82],"how":[83],"such":[84],"common":[85,148],"usage":[86],"types":[87,92,106,135],"relate":[88],"evidence-based":[91],"proposed":[95],"based":[96],"on":[97],"results":[99],"new":[101],"techniques.":[102],"Further,":[103],"comparing":[104],"different":[105],"across":[107],"labs":[108],"remains":[109],"significant":[111],"challenge.":[112],"Here,":[113],"we":[114],"propose":[115],"an":[116],"interoperable":[117],"representation,":[119],"Neuron":[121],"Phenotype":[122],"Ontology":[123],"(NPO),":[124],"provides":[126,152],"automatable":[130],"for":[132,155],"cell":[134],"normalizing":[137],"constituent":[139],"phenotypes":[140],"using":[141],"identifiers":[142],"from":[143,186],"community":[144],"ontologies":[145],"as":[146],"language.":[149],"NPO":[151,173,210],"framework":[154],"systematically":[156],"cellular":[160],"properties":[161],"enables":[163,213],"interoperability":[164,214],"with":[165,179],"existing":[166],"schemes.":[169],"We":[170],"evaluate":[171],"by":[174],"populating":[175],"base":[178,206],"three":[180,217],"independent":[181],"cortical":[182],"classifications":[184],"derived":[185],"published":[187],"sets":[189],"describe":[191],"according":[193],"molecular,":[195],"morphological,":[196],"electrophysiological,":[197],"synaptic":[199],"Competency":[201],"queries":[202],"this":[204],"demonstrate":[207],"model":[212],"between":[215],"test":[218],"cases":[219],"in":[225],"literature.":[227]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
