{"id":"https://openalex.org/W2911151692","doi":"https://doi.org/10.1007/s12021-018-9414-9","title":"Identifying Weak Signals in Inhomogeneous Neuronal Images for Large-Scale Tracing of Sparsely Distributed Neurites","display_name":"Identifying Weak Signals in Inhomogeneous Neuronal Images for Large-Scale Tracing of Sparsely Distributed Neurites","publication_year":2019,"publication_date":"2019-01-11","ids":{"openalex":"https://openalex.org/W2911151692","doi":"https://doi.org/10.1007/s12021-018-9414-9","mag":"2911151692","pmid":"https://pubmed.ncbi.nlm.nih.gov/30635864"},"language":"en","primary_location":{"id":"doi:10.1007/s12021-018-9414-9","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s12021-018-9414-9","pdf_url":"https://link.springer.com/content/pdf/10.1007/s12021-018-9414-9.pdf","source":{"id":"https://openalex.org/S3444786","display_name":"Neuroinformatics","issn_l":"1539-2791","issn":["1539-2791","1559-0089"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neuroinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s12021-018-9414-9.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070710188","display_name":"Shiwei Li","orcid":"https://orcid.org/0000-0003-0712-0059"},"institutions":[{"id":"https://openalex.org/I4210138186","display_name":"Wuhan National Laboratory for Optoelectronics","ror":"https://ror.org/03c9ncn37","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210138186"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shiwei Li","raw_affiliation_strings":["Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I4210138186","https://openalex.org/I47720641"]},{"raw_affiliation_string":"MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013264858","display_name":"Tingwei Quan","orcid":"https://orcid.org/0000-0002-8393-4292"},"institutions":[{"id":"https://openalex.org/I4210138186","display_name":"Wuhan National Laboratory for Optoelectronics","ror":"https://ror.org/03c9ncn37","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210138186"]},{"id":"https://openalex.org/I4210154851","display_name":"Hubei University of Education","ror":"https://ror.org/04f41cb79","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210154851"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Tingwei Quan","raw_affiliation_strings":["Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China. quantingwei@hust.edu.cn","MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China. quantingwei@hust.edu.cn","School of Mathematics and Economics, Hubei University of Education, Wuhan, 430205, Hubei, China. quantingwei@hust.edu.cn","Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China. quantingwei@hust.edu.cn","institution_ids":["https://openalex.org/I4210138186"]},{"raw_affiliation_string":"MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China. quantingwei@hust.edu.cn","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"School of Mathematics and Economics, Hubei University of Education, Wuhan, 430205, Hubei, China. quantingwei@hust.edu.cn","institution_ids":["https://openalex.org/I4210154851"]},{"raw_affiliation_string":"Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I4210138186","https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100706080","display_name":"Hang Zhou","orcid":"https://orcid.org/0000-0002-0072-926X"},"institutions":[{"id":"https://openalex.org/I4210138186","display_name":"Wuhan National Laboratory for Optoelectronics","ror":"https://ror.org/03c9ncn37","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210138186"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hang Zhou","raw_affiliation_strings":["Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I4210138186","https://openalex.org/I47720641"]},{"raw_affiliation_string":"MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100651695","display_name":"F Yin","orcid":"https://orcid.org/0000-0002-2025-4740"},"institutions":[{"id":"https://openalex.org/I4210138186","display_name":"Wuhan National Laboratory for Optoelectronics","ror":"https://ror.org/03c9ncn37","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210138186"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"FangFang Yin","raw_affiliation_strings":["Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I4210138186","https://openalex.org/I47720641"]},{"raw_affiliation_string":"MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017229676","display_name":"Anan Li","orcid":"https://orcid.org/0000-0002-5877-4813"},"institutions":[{"id":"https://openalex.org/I4210138186","display_name":"Wuhan National Laboratory for Optoelectronics","ror":"https://ror.org/03c9ncn37","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210138186"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Anan Li","raw_affiliation_strings":["Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I4210138186","https://openalex.org/I47720641"]},{"raw_affiliation_string":"MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031740209","display_name":"Ling Fu","orcid":"https://orcid.org/0000-0003-2513-1405"},"institutions":[{"id":"https://openalex.org/I4210138186","display_name":"Wuhan National Laboratory for Optoelectronics","ror":"https://ror.org/03c9ncn37","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210138186"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ling Fu","raw_affiliation_strings":["Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I4210138186","https://openalex.org/I47720641"]},{"raw_affiliation_string":"MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056033605","display_name":"Qingming Luo","orcid":null},"institutions":[{"id":"https://openalex.org/I4210138186","display_name":"Wuhan National Laboratory for Optoelectronics","ror":"https://ror.org/03c9ncn37","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210138186"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qingming Luo","raw_affiliation_strings":["Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I4210138186","https://openalex.org/I47720641"]},{"raw_affiliation_string":"MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067804978","display_name":"Hui Gong","orcid":"https://orcid.org/0000-0001-5519-6248"},"institutions":[{"id":"https://openalex.org/I4210138186","display_name":"Wuhan National Laboratory for Optoelectronics","ror":"https://ror.org/03c9ncn37","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210138186"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hui Gong","raw_affiliation_strings":["Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I4210138186","https://openalex.org/I47720641"]},{"raw_affiliation_string":"MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058615051","display_name":"Shaoqun Zeng","orcid":"https://orcid.org/0000-0002-1802-337X"},"institutions":[{"id":"https://openalex.org/I4210138186","display_name":"Wuhan National Laboratory for Optoelectronics","ror":"https://ror.org/03c9ncn37","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210138186"]},{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shaoqun Zeng","raw_affiliation_strings":["Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics-Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I4210138186","https://openalex.org/I47720641"]},{"raw_affiliation_string":"MOE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, Hubei, China","institution_ids":["https://openalex.org/I47720641"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5013264858"],"corresponding_institution_ids":["https://openalex.org/I4210138186","https://openalex.org/I4210154851","https://openalex.org/I47720641"],"apc_list":{"value":4190,"currency":"USD","value_usd":4190},"apc_paid":{"value":4190,"currency":"USD","value_usd":4190},"fwci":1.7541,"has_fulltext":true,"cited_by_count":18,"citation_normalized_percentile":{"value":0.86028638,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":"17","issue":"4","first_page":"497","last_page":"514"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/neurite","display_name":"Neurite","score":0.7915769815444946},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6877403855323792},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6680219173431396},{"id":"https://openalex.org/keywords/ground-truth","display_name":"Ground truth","score":0.6501514911651611},{"id":"https://openalex.org/keywords/tracing","display_name":"Tracing","score":0.6474301815032959},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.6176608204841614},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.5906528234481812},{"id":"https://openalex.org/keywords/feature-extraction","display_name":"Feature extraction","score":0.43746626377105713},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.43482500314712524},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09078755974769592}],"concepts":[{"id":"https://openalex.org/C113246987","wikidata":"https://www.wikidata.org/wiki/Q1534415","display_name":"Neurite","level":3,"score":0.7915769815444946},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6877403855323792},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6680219173431396},{"id":"https://openalex.org/C146849305","wikidata":"https://www.wikidata.org/wiki/Q370766","display_name":"Ground truth","level":2,"score":0.6501514911651611},{"id":"https://openalex.org/C138673069","wikidata":"https://www.wikidata.org/wiki/Q322229","display_name":"Tracing","level":2,"score":0.6474301815032959},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.6176608204841614},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.5906528234481812},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.43746626377105713},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.43482500314712524},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09078755974769592},{"id":"https://openalex.org/C202751555","wikidata":"https://www.wikidata.org/wiki/Q221681","display_name":"In vitro","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D001923","descriptor_name":"Brain Chemistry","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D001923","descriptor_name":"Brain Chemistry","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D001923","descriptor_name":"Brain Chemistry","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016501","descriptor_name":"Neurites","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D016501","descriptor_name":"Neurites","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D016501","descriptor_name":"Neurites","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D016501","descriptor_name":"Neurites","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016501","descriptor_name":"Neurites","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016501","descriptor_name":"Neurites","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D018613","descriptor_name":"Microscopy, Confocal","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018613","descriptor_name":"Microscopy, Confocal","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018613","descriptor_name":"Microscopy, Confocal","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1007/s12021-018-9414-9","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s12021-018-9414-9","pdf_url":"https://link.springer.com/content/pdf/10.1007/s12021-018-9414-9.pdf","source":{"id":"https://openalex.org/S3444786","display_name":"Neuroinformatics","issn_l":"1539-2791","issn":["1539-2791","1559-0089"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neuroinformatics","raw_type":"journal-article"},{"id":"pmid:30635864","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30635864","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neuroinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:6841657","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6841657","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Neuroinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1007/s12021-018-9414-9","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s12021-018-9414-9","pdf_url":"https://link.springer.com/content/pdf/10.1007/s12021-018-9414-9.pdf","source":{"id":"https://openalex.org/S3444786","display_name":"Neuroinformatics","issn_l":"1539-2791","issn":["1539-2791","1559-0089"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neuroinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.5899999737739563}],"awards":[{"id":"https://openalex.org/G1138694567","display_name":null,"funder_award_id":"61421064","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2407850874","display_name":null,"funder_award_id":"Grant No. 81327802","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3818017632","display_name":null,"funder_award_id":"81327802","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4482047300","display_name":null,"funder_award_id":"2014CFB564","funder_id":"https://openalex.org/F4320322186","funder_display_name":"Natural Science Foundation of Hubei Province"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322186","display_name":"Natural Science Foundation of Hubei Province","ror":null},{"id":"https://openalex.org/F4320325104","display_name":"Wuhan National Laboratory for Optoelectronics","ror":"https://ror.org/03c9ncn37"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2911151692.pdf","grobid_xml":"https://content.openalex.org/works/W2911151692.grobid-xml"},"referenced_works_count":71,"referenced_works":["https://openalex.org/W1508135620","https://openalex.org/W1559344731","https://openalex.org/W1596717185","https://openalex.org/W1680392829","https://openalex.org/W1885626623","https://openalex.org/W1897592488","https://openalex.org/W1924902684","https://openalex.org/W1964049834","https://openalex.org/W1971167883","https://openalex.org/W1973195069","https://openalex.org/W1974411081","https://openalex.org/W1977391294","https://openalex.org/W1983675777","https://openalex.org/W1986141983","https://openalex.org/W1997013306","https://openalex.org/W1998173357","https://openalex.org/W1998874218","https://openalex.org/W1999055090","https://openalex.org/W1999318832","https://openalex.org/W2009568463","https://openalex.org/W2017478274","https://openalex.org/W2025706827","https://openalex.org/W2030179996","https://openalex.org/W2033813088","https://openalex.org/W2036901575","https://openalex.org/W2037325897","https://openalex.org/W2042967751","https://openalex.org/W2046451474","https://openalex.org/W2051036306","https://openalex.org/W2054870083","https://openalex.org/W2055163049","https://openalex.org/W2057624533","https://openalex.org/W2061490418","https://openalex.org/W2061628168","https://openalex.org/W2067013274","https://openalex.org/W2074639335","https://openalex.org/W2084128334","https://openalex.org/W2084478514","https://openalex.org/W2092062478","https://openalex.org/W2097878486","https://openalex.org/W2103559027","https://openalex.org/W2108436498","https://openalex.org/W2114152283","https://openalex.org/W2119821739","https://openalex.org/W2124257654","https://openalex.org/W2127810309","https://openalex.org/W2129534965","https://openalex.org/W2141696437","https://openalex.org/W2142058898","https://openalex.org/W2142958591","https://openalex.org/W2145656910","https://openalex.org/W2145803225","https://openalex.org/W2152235301","https://openalex.org/W2153965609","https://openalex.org/W2156012604","https://openalex.org/W2157408013","https://openalex.org/W2158536428","https://openalex.org/W2256981962","https://openalex.org/W2319031267","https://openalex.org/W2333017092","https://openalex.org/W2467946152","https://openalex.org/W2544277621","https://openalex.org/W2560171554","https://openalex.org/W2571219130","https://openalex.org/W2594660495","https://openalex.org/W2600862990","https://openalex.org/W2773247831","https://openalex.org/W2799816053","https://openalex.org/W6679367408","https://openalex.org/W6699735363","https://openalex.org/W6821113053"],"related_works":["https://openalex.org/W2043182207","https://openalex.org/W2366233132","https://openalex.org/W2001779036","https://openalex.org/W1460773300","https://openalex.org/W2766738238","https://openalex.org/W4211170404","https://openalex.org/W2134133984","https://openalex.org/W2008631997","https://openalex.org/W3139236568","https://openalex.org/W2049523839"],"abstract_inverted_index":{"Tracing":[0],"neurites":[1,122,191,195],"constitutes":[2],"the":[3,32,42,57,223,239,248,257],"core":[4],"of":[5,21,39,47,52,230,241],"neuronal":[6,13,70],"morphology":[7],"reconstruction,":[8],"a":[9,45,87,106],"key":[10],"step":[11],"toward":[12],"circuit":[14],"mapping.":[15],"Modern":[16],"optical-imaging":[17],"techniques":[18,141],"allow":[19],"observation":[20],"nearly":[22],"complete":[23],"mouse":[24],"neuron":[25],"morphologies":[26],"across":[27],"brain":[28,155],"regions":[29],"or":[30],"even":[31],"whole":[33],"brain.":[34],"However,":[35],"high-level":[36],"automation":[37],"reconstruction":[38,43,243],"neurons,":[40],"i.e.,":[41],"with":[44,123,180,227],"few":[46],"manual":[48,213,231],"edits":[49,232],"requires":[50],"discrimination":[51],"weak":[53,124,177,204],"foreground":[54,83],"points":[55],"from":[56,69,153,192],"inhomogeneous":[58,132],"background.":[59],"We":[60,99,184],"constructed":[61,102],"an":[62,131],"identification":[63,179],"model,":[64],"where":[65,194],"empirical":[66],"observations":[67],"made":[68],"images":[71,193],"were":[72,151,163],"summarized":[73],"into":[74,105],"rules":[75],"for":[76,176],"designing":[77],"feature":[78,97],"vectors":[79],"that":[80,171,245],"to":[81,94,111,188,218,222,250],"classify":[82],"and":[84,86,145,160,165],"background,":[85],"support":[88],"vector":[89],"machine":[90],"(SVM)":[91],"was":[92,215],"used":[93,139],"learn":[95],"these":[96],"vectors.":[98],"embedded":[100],"this":[101,210],"SVM":[103],"classifier":[104],"previously":[107],"developed":[108],"tool,":[109],"SparseTracer,":[110],"obtain":[112,219],"SparseTracer-Learned":[113],"Feature":[114],"Vector":[115],"(ST-LFV).":[116],"ST-LFV":[117,172,187,246],"can":[118],"trace":[119,189],"sparsely":[120,197,253],"distributed":[121,198,254],"signals":[125],"(contrast-to-noise":[126],"ratio":[127],"<":[128],"1.5)":[129],"against":[130],"background":[133],"in":[134,205,238],"datasets":[135],"imaged":[136],"by":[137,234],"widely":[138],"light-microscopy":[140],"like":[142],"confocal":[143],"microscopy":[144],"two-photon":[146],"microscopy.":[147],"Moreover,":[148],"12":[149],"sub-blocks":[150],"extracted":[152],"different":[154],"regions.":[156],"The":[157],"average":[158],"recall":[159],"precision":[161],"rates":[162],"99%":[164],"97%,":[166],"respectively.":[167],"These":[168],"results":[169,220],"indicated":[170],"is":[173],"well":[174],"suited":[175],"signal":[178],"varying":[181],"image":[182,201],"characteristics.":[183],"also":[185],"applied":[186],"long-range":[190,211],"are":[196,203],"but":[199],"their":[200],"intensities":[202],"some":[206],"cases.":[207],"When":[208],"tracing":[209],"neurites,":[212],"edit":[214],"required":[216,233],"once":[217],"equivalent":[221],"ground":[224],"truth,":[225],"compared":[226],"20":[228],"times":[229],"SparseTracer.":[235],"This":[236],"improvement":[237],"level":[240],"automatic":[242],"indicates":[244],"has":[247],"potential":[249],"rapidly":[251],"reconstruct":[252],"neurons":[255],"at":[256],"large":[258],"scale.":[259]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":2}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
