{"id":"https://openalex.org/W2074076835","doi":"https://doi.org/10.1007/s12021-013-9213-2","title":"The Filament Editor: An Interactive Software Environment for Visualization, Proof-Editing and Analysis of 3D Neuron Morphology","display_name":"The Filament Editor: An Interactive Software Environment for Visualization, Proof-Editing and Analysis of 3D Neuron Morphology","publication_year":2013,"publication_date":"2013-12-09","ids":{"openalex":"https://openalex.org/W2074076835","doi":"https://doi.org/10.1007/s12021-013-9213-2","mag":"2074076835","pmid":"https://pubmed.ncbi.nlm.nih.gov/24323305"},"language":"en","primary_location":{"id":"doi:10.1007/s12021-013-9213-2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s12021-013-9213-2","pdf_url":null,"source":{"id":"https://openalex.org/S3444786","display_name":"Neuroinformatics","issn_l":"1539-2791","issn":["1539-2791","1559-0089"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neuroinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055987923","display_name":"Vincent J. Dercksen","orcid":"https://orcid.org/0000-0002-9878-0548"},"institutions":[{"id":"https://openalex.org/I195893171","display_name":"Zuse Institute Berlin","ror":"https://ror.org/02eva5865","country_code":"DE","type":"facility","lineage":["https://openalex.org/I195893171"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Vincent J. Dercksen","raw_affiliation_strings":["Department of Visualization and Data Analysis, Zuse Institute Berlin, Takustra\u00dfe 7, 14195, Berlin, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Visualization and Data Analysis, Zuse Institute Berlin, Takustra\u00dfe 7, 14195, Berlin, Germany","institution_ids":["https://openalex.org/I195893171"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091630951","display_name":"Hans\u2010Christian Hege","orcid":"https://orcid.org/0000-0002-6574-0988"},"institutions":[{"id":"https://openalex.org/I195893171","display_name":"Zuse Institute Berlin","ror":"https://ror.org/02eva5865","country_code":"DE","type":"facility","lineage":["https://openalex.org/I195893171"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Hans-Christian Hege","raw_affiliation_strings":["Department of Visualization and Data Analysis, Zuse Institute Berlin, Takustra\u00dfe 7, 14195, Berlin, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Visualization and Data Analysis, Zuse Institute Berlin, Takustra\u00dfe 7, 14195, Berlin, Germany","institution_ids":["https://openalex.org/I195893171"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075878858","display_name":"Marcel Oberlaender","orcid":"https://orcid.org/0000-0001-9011-0630"},"institutions":[{"id":"https://openalex.org/I4210120881","display_name":"Max Planck Florida Institute for Neuroscience","ror":"https://ror.org/02rbfnr22","country_code":"US","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210120881"]},{"id":"https://openalex.org/I4210133934","display_name":"Bernstein Center for Computational Neuroscience T\u00fcbingen","ror":"https://ror.org/03kfnwp54","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210092532","https://openalex.org/I4210133934"]},{"id":"https://openalex.org/I4210112925","display_name":"Max Planck Institute for Biological Cybernetics","ror":"https://ror.org/026nmvv73","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210112925"]}],"countries":["DE","US"],"is_corresponding":true,"raw_author_name":"Marcel Oberlaender","raw_affiliation_strings":["Bernstein Center for Computational Neuroscience, Tuebingen, Germany","Computational Neuroanatomy Group, Max Planck Institute for Biological Cybernetics, Spemannstra\u00dfe 38-44, 72076, Tuebingen, Germany","Digital Neuroanatomy, Max Planck Florida Institute, Jupiter, FL, USA"],"affiliations":[{"raw_affiliation_string":"Bernstein Center for Computational Neuroscience, Tuebingen, Germany","institution_ids":["https://openalex.org/I4210133934"]},{"raw_affiliation_string":"Computational Neuroanatomy Group, Max Planck Institute for Biological Cybernetics, Spemannstra\u00dfe 38-44, 72076, Tuebingen, Germany","institution_ids":["https://openalex.org/I4210112925"]},{"raw_affiliation_string":"Digital Neuroanatomy, Max Planck Florida Institute, Jupiter, FL, USA","institution_ids":["https://openalex.org/I4210120881"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5075878858"],"corresponding_institution_ids":["https://openalex.org/I4210112925","https://openalex.org/I4210120881","https://openalex.org/I4210133934"],"apc_list":{"value":3190,"currency":"EUR","value_usd":4190},"apc_paid":null,"fwci":3.3805,"has_fulltext":false,"cited_by_count":48,"citation_normalized_percentile":{"value":0.91917127,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"12","issue":"2","first_page":"325","last_page":"339"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9884999990463257,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7358849048614502},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5421626567840576},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5173239707946777},{"id":"https://openalex.org/keywords/neuroanatomy","display_name":"Neuroanatomy","score":0.45726829767227173},{"id":"https://openalex.org/keywords/tracing","display_name":"Tracing","score":0.457211971282959},{"id":"https://openalex.org/keywords/fast-marching-method","display_name":"Fast marching method","score":0.45479822158813477},{"id":"https://openalex.org/keywords/dendrite","display_name":"Dendrite (mathematics)","score":0.4504311680793762},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.37376511096954346},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.34292107820510864},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.29517555236816406},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21104755997657776},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.10617971420288086},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.0911916196346283}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7358849048614502},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5421626567840576},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5173239707946777},{"id":"https://openalex.org/C103378370","wikidata":"https://www.wikidata.org/wiki/Q948647","display_name":"Neuroanatomy","level":2,"score":0.45726829767227173},{"id":"https://openalex.org/C138673069","wikidata":"https://www.wikidata.org/wiki/Q322229","display_name":"Tracing","level":2,"score":0.457211971282959},{"id":"https://openalex.org/C17866373","wikidata":"https://www.wikidata.org/wiki/Q5437042","display_name":"Fast marching method","level":2,"score":0.45479822158813477},{"id":"https://openalex.org/C84248122","wikidata":"https://www.wikidata.org/wiki/Q5256671","display_name":"Dendrite (mathematics)","level":2,"score":0.4504311680793762},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.37376511096954346},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.34292107820510864},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.29517555236816406},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21104755997657776},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.10617971420288086},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0911916196346283},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1007/s12021-013-9213-2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s12021-013-9213-2","pdf_url":null,"source":{"id":"https://openalex.org/S3444786","display_name":"Neuroinformatics","issn_l":"1539-2791","issn":["1539-2791","1559-0089"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neuroinformatics","raw_type":"journal-article"},{"id":"pmid:24323305","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24323305","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neuroinformatics","raw_type":null},{"id":"pmh:oai:escidoc.org:escidoc:2019695","is_oa":false,"landing_page_url":"http://hdl.handle.net/11858/00-001M-0000-0019-0E37-B","pdf_url":null,"source":{"id":"https://openalex.org/S7407052962","display_name":"Max Planck Digital Library","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:escidoc.org:escidoc:2156028","is_oa":false,"landing_page_url":"http://hdl.handle.net/11858/00-001M-0000-0026-D079-6","pdf_url":null,"source":{"id":"https://openalex.org/S7407052962","display_name":"Max Planck Digital Library","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:escidoc.org:escidoc:2331865","is_oa":false,"landing_page_url":"http://hdl.handle.net/11858/00-001M-0000-002B-2D98-3","pdf_url":null,"source":{"id":"https://openalex.org/S7407052962","display_name":"Max Planck Digital Library","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:escidoc.org:escidoc:2578513","is_oa":false,"landing_page_url":"http://hdl.handle.net/21.11116/0000-0001-2AB4-5","pdf_url":null,"source":{"id":"https://openalex.org/S7407052962","display_name":"Max Planck Digital Library","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:escidoc.org:escidoc:2580824","is_oa":false,"landing_page_url":"http://hdl.handle.net/21.11116/0000-0001-2CAE-B","pdf_url":null,"source":{"id":"https://openalex.org/S7407052962","display_name":"Max Planck Digital Library","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":58,"referenced_works":["https://openalex.org/W602834913","https://openalex.org/W1977669867","https://openalex.org/W1978590690","https://openalex.org/W1985729153","https://openalex.org/W1986714849","https://openalex.org/W1990222898","https://openalex.org/W1995129909","https://openalex.org/W2013055086","https://openalex.org/W2015282923","https://openalex.org/W2018227909","https://openalex.org/W2018760402","https://openalex.org/W2022937801","https://openalex.org/W2028941104","https://openalex.org/W2031654716","https://openalex.org/W2032275093","https://openalex.org/W2036345186","https://openalex.org/W2037325897","https://openalex.org/W2042967751","https://openalex.org/W2047951563","https://openalex.org/W2054870083","https://openalex.org/W2061186544","https://openalex.org/W2061628168","https://openalex.org/W2072089154","https://openalex.org/W2073548539","https://openalex.org/W2075058103","https://openalex.org/W2086550814","https://openalex.org/W2087058693","https://openalex.org/W2087451538","https://openalex.org/W2100609577","https://openalex.org/W2109839589","https://openalex.org/W2110918734","https://openalex.org/W2129095703","https://openalex.org/W2135908272","https://openalex.org/W2139833624","https://openalex.org/W2142909588","https://openalex.org/W2142958591","https://openalex.org/W2143944693","https://openalex.org/W2144205806","https://openalex.org/W2145150744","https://openalex.org/W2147555557","https://openalex.org/W2148204709","https://openalex.org/W2151003399","https://openalex.org/W2151391085","https://openalex.org/W2152309982","https://openalex.org/W2156012604","https://openalex.org/W2160308091","https://openalex.org/W2161420356","https://openalex.org/W2161555761","https://openalex.org/W2164858860","https://openalex.org/W2165526058","https://openalex.org/W2165949425","https://openalex.org/W2168144640","https://openalex.org/W2169310101","https://openalex.org/W2561035718","https://openalex.org/W4206610958","https://openalex.org/W4214775604","https://openalex.org/W4239496300","https://openalex.org/W7015318181"],"related_works":["https://openalex.org/W4235631914","https://openalex.org/W2967993767","https://openalex.org/W3152149464","https://openalex.org/W97694169","https://openalex.org/W2415867404","https://openalex.org/W4297450478","https://openalex.org/W2998623850","https://openalex.org/W2951778600","https://openalex.org/W2767798546","https://openalex.org/W2027689502"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":2}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
