{"id":"https://openalex.org/W4366083026","doi":"https://doi.org/10.1007/s11548-023-02889-z","title":"Occlusion-robust scene flow-based tissue deformation recovery incorporating a mesh optimization model","display_name":"Occlusion-robust scene flow-based tissue deformation recovery incorporating a mesh optimization model","publication_year":2023,"publication_date":"2023-04-17","ids":{"openalex":"https://openalex.org/W4366083026","doi":"https://doi.org/10.1007/s11548-023-02889-z","pmid":"https://pubmed.ncbi.nlm.nih.gov/37067752"},"language":"en","primary_location":{"id":"doi:10.1007/s11548-023-02889-z","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11548-023-02889-z","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11548-023-02889-z.pdf","source":{"id":"https://openalex.org/S181408163","display_name":"International Journal of Computer Assisted Radiology and Surgery","issn_l":"1861-6410","issn":["1861-6410","1861-6429"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computer Assisted Radiology and Surgery","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s11548-023-02889-z.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101852223","display_name":"Jiahe Chen","orcid":"https://orcid.org/0000-0001-7584-7861"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Jiahe Chen","raw_affiliation_strings":["School of Engineering, The University of Tokyo, 7-3-1 Hongo, Tokyo, 113-8656, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Engineering, The University of Tokyo, 7-3-1 Hongo, Tokyo, 113-8656, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066176989","display_name":"Kazuaki Hara","orcid":"https://orcid.org/0000-0001-7291-6825"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kazuaki Hara","raw_affiliation_strings":["School of Engineering, The University of Tokyo, 7-3-1 Hongo, Tokyo, 113-8656, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Engineering, The University of Tokyo, 7-3-1 Hongo, Tokyo, 113-8656, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032675015","display_name":"Etsuko Kobayashi","orcid":"https://orcid.org/0000-0003-1794-0173"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Etsuko Kobayashi","raw_affiliation_strings":["School of Engineering, The University of Tokyo, 7-3-1 Hongo, Tokyo, 113-8656, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Engineering, The University of Tokyo, 7-3-1 Hongo, Tokyo, 113-8656, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081094990","display_name":"Ichiro Sakuma","orcid":"https://orcid.org/0000-0002-4919-9466"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Ichiro Sakuma","raw_affiliation_strings":["School of Engineering, The University of Tokyo, 7-3-1 Hongo, Tokyo, 113-8656, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Engineering, The University of Tokyo, 7-3-1 Hongo, Tokyo, 113-8656, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006350428","display_name":"Naoki Tomii","orcid":"https://orcid.org/0000-0002-5485-4883"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Naoki Tomii","raw_affiliation_strings":["School of Engineering, The University of Tokyo, 7-3-1 Hongo, Tokyo, 113-8656, Japan. naoki_tomii@bmpe.t.u-tokyo.ac.jp","School of Engineering, The University of Tokyo, 7-3-1 Hongo, Tokyo, 113-8656, Japan"],"raw_orcid":"https://orcid.org/0000-0002-5485-4883","affiliations":[{"raw_affiliation_string":"School of Engineering, The University of Tokyo, 7-3-1 Hongo, Tokyo, 113-8656, Japan. naoki_tomii@bmpe.t.u-tokyo.ac.jp","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"School of Engineering, The University of Tokyo, 7-3-1 Hongo, Tokyo, 113-8656, Japan","institution_ids":["https://openalex.org/I74801974"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5006350428"],"corresponding_institution_ids":["https://openalex.org/I74801974"],"apc_list":{"value":4390,"currency":"USD","value_usd":4390},"apc_paid":{"value":4390,"currency":"USD","value_usd":4390},"fwci":0.9727,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.66273646,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"18","issue":"6","first_page":"1043","last_page":"1051"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10719","display_name":"3D Shape Modeling and Analysis","score":0.5648000240325928,"subfield":{"id":"https://openalex.org/subfields/2206","display_name":"Computational Mechanics"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10719","display_name":"3D Shape Modeling and Analysis","score":0.5648000240325928,"subfield":{"id":"https://openalex.org/subfields/2206","display_name":"Computational Mechanics"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10868","display_name":"Soft Robotics and Applications","score":0.1096000000834465,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11562","display_name":"Facial Trauma and Fracture Management","score":0.054099999368190765,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6376431584358215},{"id":"https://openalex.org/keywords/occlusion","display_name":"Occlusion","score":0.6274905204772949},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.47530850768089294},{"id":"https://openalex.org/keywords/flow","display_name":"Flow (mathematics)","score":0.47056815028190613},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4096972346305847},{"id":"https://openalex.org/keywords/biomedical-engineering","display_name":"Biomedical engineering","score":0.34453949332237244},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2595018744468689},{"id":"https://openalex.org/keywords/surgery","display_name":"Surgery","score":0.2308139204978943},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.0962061882019043}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6376431584358215},{"id":"https://openalex.org/C2776268601","wikidata":"https://www.wikidata.org/wiki/Q968808","display_name":"Occlusion","level":2,"score":0.6274905204772949},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.47530850768089294},{"id":"https://openalex.org/C38349280","wikidata":"https://www.wikidata.org/wiki/Q1434290","display_name":"Flow (mathematics)","level":2,"score":0.47056815028190613},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4096972346305847},{"id":"https://openalex.org/C136229726","wikidata":"https://www.wikidata.org/wiki/Q327092","display_name":"Biomedical engineering","level":1,"score":0.34453949332237244},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2595018744468689},{"id":"https://openalex.org/C141071460","wikidata":"https://www.wikidata.org/wiki/Q40821","display_name":"Surgery","level":1,"score":0.2308139204978943},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0962061882019043},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009038","descriptor_name":"Motion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009038","descriptor_name":"Motion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009038","descriptor_name":"Motion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013526","descriptor_name":"Surgical Mesh","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013526","descriptor_name":"Surgical Mesh","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013526","descriptor_name":"Surgical Mesh","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019060","descriptor_name":"Minimally Invasive Surgical Procedures","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019060","descriptor_name":"Minimally Invasive Surgical Procedures","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019060","descriptor_name":"Minimally Invasive Surgical Procedures","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025321","descriptor_name":"Surgery, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D025321","descriptor_name":"Surgery, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D025321","descriptor_name":"Surgery, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1007/s11548-023-02889-z","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11548-023-02889-z","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11548-023-02889-z.pdf","source":{"id":"https://openalex.org/S181408163","display_name":"International Journal of Computer Assisted Radiology and Surgery","issn_l":"1861-6410","issn":["1861-6410","1861-6429"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computer Assisted Radiology and Surgery","raw_type":"journal-article"},{"id":"pmid:37067752","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37067752","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International journal of computer assisted radiology and surgery","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10284992","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10284992","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10284992/pdf/11548_2023_Article_2889.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Int J Comput Assist Radiol Surg","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1007/s11548-023-02889-z","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11548-023-02889-z","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11548-023-02889-z.pdf","source":{"id":"https://openalex.org/S181408163","display_name":"International Journal of Computer Assisted Radiology and Surgery","issn_l":"1861-6410","issn":["1861-6410","1861-6429"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computer Assisted Radiology and Surgery","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5038550912","display_name":"Development of an AI defibrillator with automatic arrhythmia control by deep reinforcement learning","funder_award_id":"21K18036","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320322832","display_name":"University of Tokyo","ror":"https://ror.org/057zh3y96"},{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4366083026.pdf"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W138323887","https://openalex.org/W1992642990","https://openalex.org/W2049372418","https://openalex.org/W2125188427","https://openalex.org/W2754664027","https://openalex.org/W2775267671","https://openalex.org/W2794322549","https://openalex.org/W2963619659","https://openalex.org/W2986836173","https://openalex.org/W3015883481","https://openalex.org/W3037004379","https://openalex.org/W3109379931","https://openalex.org/W3181702434","https://openalex.org/W3193629301","https://openalex.org/W3194662286","https://openalex.org/W3216197819","https://openalex.org/W4200284582","https://openalex.org/W4220837212","https://openalex.org/W4226320035","https://openalex.org/W4296146307"],"related_works":["https://openalex.org/W2772917594","https://openalex.org/W2036807459","https://openalex.org/W2058170566","https://openalex.org/W2755342338","https://openalex.org/W2166024367","https://openalex.org/W3116076068","https://openalex.org/W2229312674","https://openalex.org/W2951359407","https://openalex.org/W2079911747","https://openalex.org/W1969923398"],"abstract_inverted_index":{"PURPOSE:":[0],"Tissue":[1],"deformation":[2,49,87,174,228],"recovery":[3,50,88],"is":[4,21,44,108,145,210],"to":[5,73,118,134,151,221,234,243],"reconstruct":[6],"the":[7,31,34,65,71,74,82,109,112,120,124,136,149,166,169,176,191,196,201,207,235,247],"change":[8],"in":[9,163,171,175,200,249],"shape":[10,27],"and":[11,26,70,93,161,241],"surface":[12,173,194,227],"strain":[13],"caused":[14,76,237],"by":[15,77,153,189,238],"tool-tissue":[16],"interaction":[17],"or":[18],"respiration,":[19],"which":[20],"essential":[22],"for":[23,48,246],"providing":[24],"motion":[25,122],"information":[28],"that":[29,147,206],"benefits":[30],"improvement":[32],"of":[33,36,111,168,178,224],"safety":[35],"minimally":[37],"invasive":[38],"surgery.":[39,251],"The":[40,97,105,216],"binocular":[41,125],"vision-based":[42],"approach":[43],"a":[45,86,130,141,159],"practical":[46],"candidate":[47],"as":[51,64],"no":[52],"extra":[53],"devices":[54],"are":[55],"required.":[56],"However,":[57],"previous":[58],"methods":[59],"suffer":[60],"from":[61,123],"limitations":[62],"such":[63],"reliance":[66],"on":[67],"biomechanical":[68],"priors":[69],"vulnerability":[72],"occlusion":[75,152,180,236],"surgical":[78,239],"instruments.":[79],"To":[80],"address":[81],"issues,":[83],"we":[84,128],"propose":[85,129],"method":[89,98,133,170,217],"incorporating":[90],"mesh":[91,142,193,230],"structures":[92],"scene":[94,114,138],"flow.":[95,139],"METHODS:":[96],"can":[99],"be":[100,222,244],"divided":[101],"into":[102],"three":[103],"modules.":[104],"first":[106],"one":[107],"implementation":[110],"two-step":[113],"flow":[115],"generation":[116],"module":[117],"extract":[119],"3D":[121,197],"sequence.":[126],"Second,":[127],"strain-based":[131],"filtering":[132],"denoise":[135],"original":[137],"Third,":[140],"optimization":[143],"model":[144,199],"proposed":[146],"strengthens":[148],"robustness":[150,233],"employing":[154],"contextual":[155],"connectivity.":[156],"RESULTS:":[157],"In":[158],"phantom":[160,202],"an":[162],"vivo":[164],"experiment,":[165],"feasibility":[167],"recovering":[172,226],"presence":[177],"tool-induced":[179],"was":[181,186],"demonstrated.":[182],"Surface":[183],"reconstruction":[184],"accuracy":[185],"quantitatively":[187],"evaluated":[188],"comparing":[190],"recovered":[192],"with":[195,232],"scanned":[198],"experiment.":[203],"Results":[204],"show":[205],"overall":[208],"error":[209],"0.70":[211],"\u00b1":[212],"0.55":[213],"mm.":[214],"CONCLUSION:":[215],"has":[218],"been":[219],"demonstrated":[220],"capable":[223],"continuously":[225],"using":[229],"representation":[231],"forceps":[240],"promises":[242],"suitable":[245],"application":[248],"actual":[250]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
