{"id":"https://openalex.org/W4362506320","doi":"https://doi.org/10.1007/s11548-023-02881-7","title":"SlicerCBM: automatic framework for biomechanical analysis of the brain","display_name":"SlicerCBM: automatic framework for biomechanical analysis of the brain","publication_year":2023,"publication_date":"2023-04-01","ids":{"openalex":"https://openalex.org/W4362506320","doi":"https://doi.org/10.1007/s11548-023-02881-7","pmid":"https://pubmed.ncbi.nlm.nih.gov/37004646"},"language":"en","primary_location":{"id":"doi:10.1007/s11548-023-02881-7","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11548-023-02881-7","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11548-023-02881-7.pdf","source":{"id":"https://openalex.org/S181408163","display_name":"International Journal of Computer Assisted Radiology and Surgery","issn_l":"1861-6410","issn":["1861-6410","1861-6429"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computer Assisted Radiology and Surgery","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s11548-023-02881-7.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085445609","display_name":"Saima Safdar","orcid":"https://orcid.org/0000-0001-5994-061X"},"institutions":[{"id":"https://openalex.org/I177877127","display_name":"The University of Western Australia","ror":"https://ror.org/047272k79","country_code":"AU","type":"education","lineage":["https://openalex.org/I177877127"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Saima Safdar","raw_affiliation_strings":["Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia. saima.safdar@research.uwa.edu.au","Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia"],"raw_orcid":"https://orcid.org/0000-0001-5994-061X","affiliations":[{"raw_affiliation_string":"Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia. saima.safdar@research.uwa.edu.au","institution_ids":["https://openalex.org/I177877127"]},{"raw_affiliation_string":"Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia","institution_ids":["https://openalex.org/I177877127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007374593","display_name":"Benjamin F. Zwick","orcid":"https://orcid.org/0000-0003-0184-1082"},"institutions":[{"id":"https://openalex.org/I177877127","display_name":"The University of Western Australia","ror":"https://ror.org/047272k79","country_code":"AU","type":"education","lineage":["https://openalex.org/I177877127"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Benjamin F. Zwick","raw_affiliation_strings":["Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia","institution_ids":["https://openalex.org/I177877127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033075806","display_name":"Yue Yu","orcid":"https://orcid.org/0000-0002-1925-3038"},"institutions":[{"id":"https://openalex.org/I177877127","display_name":"The University of Western Australia","ror":"https://ror.org/047272k79","country_code":"AU","type":"education","lineage":["https://openalex.org/I177877127"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Yue Yu","raw_affiliation_strings":["Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia","institution_ids":["https://openalex.org/I177877127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069022172","display_name":"George C. Bourantas","orcid":"https://orcid.org/0000-0001-9503-4614"},"institutions":[{"id":"https://openalex.org/I174878644","display_name":"University of Patras","ror":"https://ror.org/017wvtq80","country_code":"GR","type":"education","lineage":["https://openalex.org/I174878644"]},{"id":"https://openalex.org/I177877127","display_name":"The University of Western Australia","ror":"https://ror.org/047272k79","country_code":"AU","type":"education","lineage":["https://openalex.org/I177877127"]}],"countries":["AU","GR"],"is_corresponding":false,"raw_author_name":"George C. Bourantas","raw_affiliation_strings":["Department of Agriculture, University of Patras Nea Ktiria, 30200, Campus Mesologhi, Greece","Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Agriculture, University of Patras Nea Ktiria, 30200, Campus Mesologhi, Greece","institution_ids":["https://openalex.org/I174878644"]},{"raw_affiliation_string":"Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia","institution_ids":["https://openalex.org/I177877127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074013333","display_name":"Grand Roman Joldes","orcid":"https://orcid.org/0000-0003-0496-5785"},"institutions":[{"id":"https://openalex.org/I177877127","display_name":"The University of Western Australia","ror":"https://ror.org/047272k79","country_code":"AU","type":"education","lineage":["https://openalex.org/I177877127"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Grand R. Joldes","raw_affiliation_strings":["Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia","institution_ids":["https://openalex.org/I177877127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054913205","display_name":"Simon K. Warfield","orcid":"https://orcid.org/0000-0002-7659-3880"},"institutions":[{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Simon K. Warfield","raw_affiliation_strings":["Computational Radiology Laboratory, Boston Children's Hospital, Boston, MA, USA","Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Radiology Laboratory, Boston Children's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1288882113"]},{"raw_affiliation_string":"Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006194216","display_name":"Damon E. Hyde","orcid":"https://orcid.org/0000-0001-6686-5646"},"institutions":[{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Damon E. Hyde","raw_affiliation_strings":["Computational Radiology Laboratory, Boston Children's Hospital, Boston, MA, USA","Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Radiology Laboratory, Boston Children's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1288882113"]},{"raw_affiliation_string":"Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029558635","display_name":"Sarah Frisken","orcid":"https://orcid.org/0000-0001-5731-5095"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sarah Frisken","raw_affiliation_strings":["Brigham and Women's Hospital, Boston, MA, USA","Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brigham and Women's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774"]},{"raw_affiliation_string":"Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091681491","display_name":"Tina Kapur","orcid":"https://orcid.org/0000-0003-3646-9508"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tina Kapur","raw_affiliation_strings":["Brigham and Women's Hospital, Boston, MA, USA","Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brigham and Women's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774"]},{"raw_affiliation_string":"Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012263767","display_name":"Ron Kikinis","orcid":"https://orcid.org/0000-0001-7227-7058"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ron Kikinis","raw_affiliation_strings":["Brigham and Women's Hospital, Boston, MA, USA","Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brigham and Women's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774"]},{"raw_affiliation_string":"Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022796764","display_name":"Alexandra J. Golby","orcid":"https://orcid.org/0000-0001-8461-9561"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexandra Golby","raw_affiliation_strings":["Brigham and Women's Hospital, Boston, MA, USA","Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brigham and Women's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774"]},{"raw_affiliation_string":"Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109217529","display_name":"Arya Nabavi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210098247","display_name":"KRH Klinikum Nordstadt","ror":"https://ror.org/00tq6rn55","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210098247"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Arya Nabavi","raw_affiliation_strings":["Department of Neurosurgery, KRH Klinikum Nordstadt, Hannover, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Neurosurgery, KRH Klinikum Nordstadt, Hannover, Germany","institution_ids":["https://openalex.org/I4210098247"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023397334","display_name":"Adam Wittek","orcid":"https://orcid.org/0000-0001-9780-8361"},"institutions":[{"id":"https://openalex.org/I177877127","display_name":"The University of Western Australia","ror":"https://ror.org/047272k79","country_code":"AU","type":"education","lineage":["https://openalex.org/I177877127"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Adam Wittek","raw_affiliation_strings":["Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia","institution_ids":["https://openalex.org/I177877127"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052254085","display_name":"Karol Miller","orcid":"https://orcid.org/0000-0002-6577-2082"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I177877127","display_name":"The University of Western Australia","ror":"https://ror.org/047272k79","country_code":"AU","type":"education","lineage":["https://openalex.org/I177877127"]}],"countries":["AU","US"],"is_corresponding":false,"raw_author_name":"Karol Miller","raw_affiliation_strings":["Harvard Medical School, Boston, MA, USA","Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Intelligent Systems for Medicine Laboratory, The University of Western Australia, 35 Stirling Highway, Perth, WA, Australia","institution_ids":["https://openalex.org/I177877127"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5085445609"],"corresponding_institution_ids":["https://openalex.org/I177877127"],"apc_list":{"value":4390,"currency":"USD","value_usd":4390},"apc_paid":{"value":4390,"currency":"USD","value_usd":4390},"fwci":0.8059,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.61985019,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"18","issue":"10","first_page":"1925","last_page":"1940"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10719","display_name":"3D Shape Modeling and Analysis","score":0.19059999287128448,"subfield":{"id":"https://openalex.org/subfields/2206","display_name":"Computational Mechanics"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10719","display_name":"3D Shape Modeling and Analysis","score":0.19059999287128448,"subfield":{"id":"https://openalex.org/subfields/2206","display_name":"Computational Mechanics"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11487","display_name":"Automotive and Human Injury Biomechanics","score":0.16120000183582306,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.08730000257492065,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/craniotomy","display_name":"Craniotomy","score":0.6620035171508789},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6575139164924622},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5267110466957092},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.485897958278656},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.18626773357391357},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.1801978051662445}],"concepts":[{"id":"https://openalex.org/C2778871575","wikidata":"https://www.wikidata.org/wiki/Q514921","display_name":"Craniotomy","level":2,"score":0.6620035171508789},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6575139164924622},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5267110466957092},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.485897958278656},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.18626773357391357},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.1801978051662445},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D001932","descriptor_name":"Brain Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D003399","descriptor_name":"Craniotomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003399","descriptor_name":"Craniotomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003399","descriptor_name":"Craniotomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003399","descriptor_name":"Craniotomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003399","descriptor_name":"Craniotomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003399","descriptor_name":"Craniotomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019635","descriptor_name":"Neurosurgical Procedures","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019635","descriptor_name":"Neurosurgical Procedures","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019635","descriptor_name":"Neurosurgical Procedures","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019635","descriptor_name":"Neurosurgical Procedures","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019635","descriptor_name":"Neurosurgical Procedures","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019635","descriptor_name":"Neurosurgical Procedures","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1007/s11548-023-02881-7","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11548-023-02881-7","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11548-023-02881-7.pdf","source":{"id":"https://openalex.org/S181408163","display_name":"International Journal of Computer Assisted Radiology and Surgery","issn_l":"1861-6410","issn":["1861-6410","1861-6429"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computer Assisted Radiology and Surgery","raw_type":"journal-article"},{"id":"pmh:oai:pure.atira.dk:openaire/12cb0ff6-007d-4879-9690-b81a65c5d5e0","is_oa":true,"landing_page_url":"https://research-repository.uwa.edu.au/en/publications/12cb0ff6-007d-4879-9690-b81a65c5d5e0","pdf_url":null,"source":{"id":"https://openalex.org/S4306402492","display_name":"UWA Profiles and Research Repository (UWA)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177877127","host_organization_name":"The University of Western Australia","host_organization_lineage":["https://openalex.org/I177877127"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Safdar, S, Zwick, B F, Yu, Y, Bourantas, G C, Joldes, G R, Warfield, S K, Hyde, D E, Frisken, S, Kapur, T, Kikinis, R, Golby, A, Nabavi, A, Wittek, A & Miller, K 2023, 'SlicerCBM : automatic framework for biomechanical analysis of the brain', International Journal of Computer Assisted Radiology and Surgery, vol. 18, no. 10, pp. 1925-1940. https://doi.org/10.1007/s11548-023-02881-7","raw_type":"info:eu-repo/semantics/article"},{"id":"pmid:37004646","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37004646","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International journal of computer assisted radiology and surgery","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:10497672","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10497672","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10497672/pdf/11548_2023_Article_2881.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Int J Comput Assist Radiol Surg","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1007/s11548-023-02881-7","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11548-023-02881-7","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11548-023-02881-7.pdf","source":{"id":"https://openalex.org/S181408163","display_name":"International Journal of Computer Assisted Radiology and Surgery","issn_l":"1861-6410","issn":["1861-6410","1861-6429"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computer Assisted Radiology and Surgery","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1139650882","display_name":"Ultrasound based neurosurgical navigation with uncertainty visualization","funder_award_id":"5r01eb032387-03","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G161873762","display_name":"Continuous Compensation of Brain Shift during Neurosurgery","funder_award_id":"5r01eb027134-04","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G1649372110","display_name":null,"funder_award_id":"P50\u2010HD105351","funder_id":"https://openalex.org/F4320337611","funder_display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development"},{"id":"https://openalex.org/G1791871972","display_name":"TRD 2 - Deep Learning","funder_award_id":"5p41eb028741-03","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2394513287","display_name":"Neuroimaging Analysis Center (NAC)","funder_award_id":"5p41eb015902-25","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3394528919","display_name":"Lymph Node Quantification System for Multisite Clinical Trials","funder_award_id":"5r01ca235589-05","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3618943016","display_name":null,"funder_award_id":"P41 EB 028741","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"},{"id":"https://openalex.org/G4007236124","display_name":null,"funder_award_id":"HHSN26110071","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G463383037","display_name":null,"funder_award_id":"R01EB027134","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"},{"id":"https://openalex.org/G5015485858","display_name":null,"funder_award_id":"R01 CA235589","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G5313365987","display_name":null,"funder_award_id":"R01 EB032387","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"},{"id":"https://openalex.org/G6012682559","display_name":null,"funder_award_id":"HHSN261201500003I","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G6556345416","display_name":"Towards better neuronavigation in epilepsy surgery: pre-operative MRI to intra-operative CT registration","funder_award_id":"1162030","funder_id":"https://openalex.org/F4320334705","funder_display_name":"National Health and Medical Research Council"},{"id":"https://openalex.org/G6680631961","display_name":"Resection-induced brain shift estimation: biomechanics-based approach","funder_award_id":"1144519","funder_id":"https://openalex.org/F4320334705","funder_display_name":"National Health and Medical Research Council"},{"id":"https://openalex.org/G8422249695","display_name":null,"funder_award_id":"HHSN261201500003C","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G854044502","display_name":null,"funder_award_id":"P41 EB015902","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"},{"id":"https://openalex.org/G8882569155","display_name":null,"funder_award_id":"HHSN261201500003I","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320320991","display_name":"University of Western Australia","ror":"https://ror.org/047272k79"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"},{"id":"https://openalex.org/F4320334705","display_name":"National Health and Medical Research Council","ror":"https://ror.org/011kf5r70"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"},{"id":"https://openalex.org/F4320337363","display_name":"National Institute of Biomedical Imaging and Bioengineering","ror":"https://ror.org/00372qc85"},{"id":"https://openalex.org/F4320337611","display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","ror":"https://ror.org/04byxyr05"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4362506320.pdf","grobid_xml":"https://content.openalex.org/works/W4362506320.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W36855634","https://openalex.org/W1483829582","https://openalex.org/W1502104358","https://openalex.org/W1544395570","https://openalex.org/W1578622402","https://openalex.org/W1600606400","https://openalex.org/W1929564070","https://openalex.org/W1969521796","https://openalex.org/W1976593207","https://openalex.org/W1987257409","https://openalex.org/W2014545843","https://openalex.org/W2025900150","https://openalex.org/W2026616100","https://openalex.org/W2027091505","https://openalex.org/W2039979158","https://openalex.org/W2042115479","https://openalex.org/W2047167129","https://openalex.org/W2069116852","https://openalex.org/W2112311198","https://openalex.org/W2129460996","https://openalex.org/W2147285069","https://openalex.org/W2155652770","https://openalex.org/W2157270343","https://openalex.org/W2157380596","https://openalex.org/W2158778494","https://openalex.org/W2545508099","https://openalex.org/W2610854950","https://openalex.org/W2945475836","https://openalex.org/W2968307910","https://openalex.org/W3131237686","https://openalex.org/W3135297423","https://openalex.org/W3205790676","https://openalex.org/W4214876407","https://openalex.org/W4233857083"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2377701744","https://openalex.org/W1506439895","https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W2383014186","https://openalex.org/W2397952901"],"abstract_inverted_index":{"PURPOSE:":[0],"Brain":[1],"shift":[2,15,130],"that":[3,159],"occurs":[4],"during":[5],"neurosurgery":[6],"disturbs":[7],"the":[8,13,22,46,95,100,112,181,209,212,219,224,229,254],"brain's":[9],"anatomy.":[10],"Prediction":[11],"of":[12,21,114,208,223,239,256],"brain":[14,51,97,104,129,152],"is":[16,122],"essential":[17],"for":[18,34,48,69,89],"accurate":[19],"localisation":[20],"surgical":[23],"target.":[24],"Biomechanical":[25],"models":[26],"have":[27],"been":[28],"envisaged":[29],"as":[30],"a":[31,42,150,171,236],"possible":[32],"tool":[33],"such":[35],"predictions.":[36],"In":[37],"this":[38],"study,":[39],"we":[40,188],"created":[41,55],"framework":[43,57,93,121,141,234,258],"to":[44,124,148,160,166],"automate":[45],"workflow":[47],"predicting":[49,260],"intra-operative":[50,117,178,183,196,230,261],"deformations.":[52],"METHODS:":[53],"We":[54,138,169,251],"our":[56,61,140,176,257],"by":[58,174,259],"uniquely":[59],"combining":[60],"meshless":[62],"total":[63],"Lagrangian":[64],"explicit":[65],"dynamics":[66],"(MTLED)":[67],"algorithm":[68],"computing":[70],"soft":[71],"tissue":[72],"deformations,":[73],"open-source":[74,84],"software":[75,85],"libraries":[76],"and":[77,108,135,158,194,203],"built-in":[78],"functions":[79],"within":[80,216],"3D":[81],"Slicer,":[82],"an":[83],"package":[86],"widely":[87],"used":[88,123],"medical":[90],"research.":[91],"Our":[92,120,233],"generates":[94],"biomechanical":[96,153],"model":[98,154],"from":[99,164,228],"pre-operative":[101],"MRI,":[102],"computes":[103],"deformation":[105],"using":[106,142],"MTLED":[107],"outputs":[109],"results":[110],"in":[111,245,249,263],"form":[113],"predicted":[115,177,193],"warped":[116],"MRI.":[118,184,231],"RESULTS:":[119],"solve":[125],"three":[126],"different":[127],"neurosurgical":[128,267],"scenarios:":[131],"craniotomy,":[132],"tumour":[133,204],"resection":[134],"electrode":[136],"placement.":[137],"evaluated":[139],"nine":[143,264],"patients.":[144],"The":[145],"average":[146],"time":[147],"construct":[149],"patient-specific":[151],"was":[155],"3":[156],"min,":[157],"compute":[161],"deformations":[162,262],"ranged":[163],"13":[165],"23":[167],"min.":[168],"performed":[170],"qualitative":[172],"evaluation":[173],"comparing":[175],"MRI":[179],"with":[180,201],"actual":[182,195,225],"For":[185,199],"quantitative":[186],"evaluation,":[187],"computed":[189],"Hausdorff":[190],"distances":[191],"between":[192],"ventricle":[197,213],"surfaces.":[198],"patients":[200,265],"craniotomy":[202],"resection,":[205],"approximately":[206],"95%":[207],"nodes":[210],"on":[211],"surfaces":[214],"are":[215],"two":[217],"times":[218],"original":[220],"in-plane":[221],"resolution":[222],"surface":[226],"determined":[227],"CONCLUSION:":[232],"provides":[235],"broader":[237],"application":[238,255],"existing":[240],"solution":[241],"methods":[242],"not":[243],"only":[244],"research":[246],"but":[247],"also":[248],"clinics.":[250],"successfully":[252],"demonstrated":[253],"undergoing":[266],"procedures.":[268]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1}],"updated_date":"2026-09-03T10:48:47.769340","created_date":"2025-10-10T00:00:00"}
