{"id":"https://openalex.org/W3193657022","doi":"https://doi.org/10.1007/s11548-021-02473-3","title":"Surgical workflow recognition with 3DCNN for Sleeve Gastrectomy","display_name":"Surgical workflow recognition with 3DCNN for Sleeve Gastrectomy","publication_year":2021,"publication_date":"2021-08-20","ids":{"openalex":"https://openalex.org/W3193657022","doi":"https://doi.org/10.1007/s11548-021-02473-3","mag":"3193657022","pmid":"https://pubmed.ncbi.nlm.nih.gov/34415503"},"language":"en","primary_location":{"id":"doi:10.1007/s11548-021-02473-3","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11548-021-02473-3","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11548-021-02473-3.pdf","source":{"id":"https://openalex.org/S181408163","display_name":"International Journal of Computer Assisted Radiology and Surgery","issn_l":"1861-6410","issn":["1861-6410","1861-6429"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computer Assisted Radiology and Surgery","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s11548-021-02473-3.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101765161","display_name":"Bokai Zhang","orcid":"https://orcid.org/0000-0003-1906-2116"},"institutions":[{"id":"https://openalex.org/I1330063522","display_name":"Johnson & Johnson (United States)","ror":"https://ror.org/03qd7mz70","country_code":"US","type":"company","lineage":["https://openalex.org/I1330063522"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Bokai Zhang","raw_affiliation_strings":["C-SATS, Inc. Johnson & Johnson, 1100 Olive Way, Suite 1100, Seattle, WA, 98101, USA. bzhang29@its.jnj.com","C-SATS, Inc. Johnson & Johnson, 1100 Olive Way, Suite 1100, Seattle, WA, 98101, USA"],"raw_orcid":"https://orcid.org/0000-0003-1906-2116","affiliations":[{"raw_affiliation_string":"C-SATS, Inc. Johnson & Johnson, 1100 Olive Way, Suite 1100, Seattle, WA, 98101, USA. bzhang29@its.jnj.com","institution_ids":["https://openalex.org/I1330063522"]},{"raw_affiliation_string":"C-SATS, Inc. Johnson & Johnson, 1100 Olive Way, Suite 1100, Seattle, WA, 98101, USA","institution_ids":["https://openalex.org/I1330063522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109848184","display_name":"Amer Ghanem","orcid":null},"institutions":[{"id":"https://openalex.org/I1330063522","display_name":"Johnson & Johnson (United States)","ror":"https://ror.org/03qd7mz70","country_code":"US","type":"company","lineage":["https://openalex.org/I1330063522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amer Ghanem","raw_affiliation_strings":["C-SATS, Inc. Johnson & Johnson, 1100 Olive Way, Suite 1100, Seattle, WA, 98101, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"C-SATS, Inc. Johnson & Johnson, 1100 Olive Way, Suite 1100, Seattle, WA, 98101, USA","institution_ids":["https://openalex.org/I1330063522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045084192","display_name":"Alexander Simes","orcid":null},"institutions":[{"id":"https://openalex.org/I1330063522","display_name":"Johnson & Johnson (United States)","ror":"https://ror.org/03qd7mz70","country_code":"US","type":"company","lineage":["https://openalex.org/I1330063522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander Simes","raw_affiliation_strings":["C-SATS, Inc. Johnson & Johnson, 1100 Olive Way, Suite 1100, Seattle, WA, 98101, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"C-SATS, Inc. Johnson & Johnson, 1100 Olive Way, Suite 1100, Seattle, WA, 98101, USA","institution_ids":["https://openalex.org/I1330063522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050224633","display_name":"Henry Choi","orcid":null},"institutions":[{"id":"https://openalex.org/I1330063522","display_name":"Johnson & Johnson (United States)","ror":"https://ror.org/03qd7mz70","country_code":"US","type":"company","lineage":["https://openalex.org/I1330063522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Henry Choi","raw_affiliation_strings":["C-SATS, Inc. Johnson & Johnson, 1100 Olive Way, Suite 1100, Seattle, WA, 98101, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"C-SATS, Inc. Johnson & Johnson, 1100 Olive Way, Suite 1100, Seattle, WA, 98101, USA","institution_ids":["https://openalex.org/I1330063522"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053403450","display_name":"Andrew Yoo","orcid":"https://orcid.org/0000-0001-7208-3587"},"institutions":[{"id":"https://openalex.org/I1330063522","display_name":"Johnson & Johnson (United States)","ror":"https://ror.org/03qd7mz70","country_code":"US","type":"company","lineage":["https://openalex.org/I1330063522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew Yoo","raw_affiliation_strings":["C-SATS, Inc. Johnson & Johnson, 1100 Olive Way, Suite 1100, Seattle, WA, 98101, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"C-SATS, Inc. Johnson & Johnson, 1100 Olive Way, Suite 1100, Seattle, WA, 98101, USA","institution_ids":["https://openalex.org/I1330063522"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5101765161"],"corresponding_institution_ids":["https://openalex.org/I1330063522"],"apc_list":{"value":4390,"currency":"USD","value_usd":4390},"apc_paid":{"value":4390,"currency":"USD","value_usd":4390},"fwci":4.6588,"has_fulltext":true,"cited_by_count":36,"citation_normalized_percentile":{"value":0.95982026,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"16","issue":"11","first_page":"2029","last_page":"2036"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10916","display_name":"Surgical Simulation and Training","score":0.7009999752044678,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10916","display_name":"Surgical Simulation and Training","score":0.7009999752044678,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.03959999978542328,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10552","display_name":"Colorectal Cancer Screening and Detection","score":0.018799999728798866,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.9551004767417908},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7698541879653931},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.7643486857414246},{"id":"https://openalex.org/keywords/jaccard-index","display_name":"Jaccard index","score":0.6298155188560486},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5376808047294617},{"id":"https://openalex.org/keywords/sleeve-gastrectomy","display_name":"Sleeve gastrectomy","score":0.45740652084350586},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4361937344074249},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.4295361638069153},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.41259902715682983},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.2867542505264282},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.15163636207580566},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.1324678659439087}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.9551004767417908},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7698541879653931},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.7643486857414246},{"id":"https://openalex.org/C203519979","wikidata":"https://www.wikidata.org/wiki/Q865360","display_name":"Jaccard index","level":3,"score":0.6298155188560486},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5376808047294617},{"id":"https://openalex.org/C2778586554","wikidata":"https://www.wikidata.org/wiki/Q550141","display_name":"Sleeve gastrectomy","level":5,"score":0.45740652084350586},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4361937344074249},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.4295361638069153},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.41259902715682983},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.2867542505264282},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.15163636207580566},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.1324678659439087},{"id":"https://openalex.org/C3019402062","wikidata":"https://www.wikidata.org/wiki/Q1813603","display_name":"Gastric bypass","level":4,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C511355011","wikidata":"https://www.wikidata.org/wiki/Q12174","display_name":"Obesity","level":2,"score":0.0},{"id":"https://openalex.org/C544821477","wikidata":"https://www.wikidata.org/wiki/Q718113","display_name":"Weight loss","level":3,"score":0.0},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D005743","descriptor_name":"Gastrectomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005743","descriptor_name":"Gastrectomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005743","descriptor_name":"Gastrectomy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025321","descriptor_name":"Surgery, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025321","descriptor_name":"Surgery, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025321","descriptor_name":"Surgery, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1007/s11548-021-02473-3","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11548-021-02473-3","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11548-021-02473-3.pdf","source":{"id":"https://openalex.org/S181408163","display_name":"International Journal of Computer Assisted Radiology and Surgery","issn_l":"1861-6410","issn":["1861-6410","1861-6429"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computer Assisted Radiology and Surgery","raw_type":"journal-article"},{"id":"pmid:34415503","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34415503","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International journal of computer assisted radiology and surgery","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8589754","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8589754","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Int J Comput Assist Radiol Surg","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1007/s11548-021-02473-3","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11548-021-02473-3","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11548-021-02473-3.pdf","source":{"id":"https://openalex.org/S181408163","display_name":"International Journal of Computer Assisted Radiology and Surgery","issn_l":"1861-6410","issn":["1861-6410","1861-6429"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computer Assisted Radiology and Surgery","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3193657022.pdf","grobid_xml":"https://content.openalex.org/works/W3193657022.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1964124590","https://openalex.org/W2035795116","https://openalex.org/W2148143831","https://openalex.org/W2183341477","https://openalex.org/W2194775991","https://openalex.org/W2266464013","https://openalex.org/W2413235447","https://openalex.org/W2606308270","https://openalex.org/W2620091247","https://openalex.org/W2777273430","https://openalex.org/W2784208381","https://openalex.org/W2797139127","https://openalex.org/W2804935296","https://openalex.org/W2883373215","https://openalex.org/W2884036902","https://openalex.org/W2888727550","https://openalex.org/W2895654826","https://openalex.org/W2901879337","https://openalex.org/W2958914562","https://openalex.org/W2963351448","https://openalex.org/W2963524571","https://openalex.org/W2964161686","https://openalex.org/W2979797179","https://openalex.org/W2980009295","https://openalex.org/W2993292663","https://openalex.org/W3102408484","https://openalex.org/W6608807985"],"related_works":["https://openalex.org/W4254879869","https://openalex.org/W3022576529","https://openalex.org/W2628526247","https://openalex.org/W2596401011","https://openalex.org/W4226493464","https://openalex.org/W4312417841","https://openalex.org/W3193565141","https://openalex.org/W3133861977","https://openalex.org/W3167935049","https://openalex.org/W3029198973"],"abstract_inverted_index":{"PURPOSE:":[0],"Surgical":[1],"workflow":[2,35,59,71,94,112,157,178,215],"recognition":[3,36,60,105,216],"is":[4],"a":[5,12,21,26,45,69,83,114,164],"crucial":[6],"and":[7,25,62,147,162,182,200],"challenging":[8],"problem":[9,61],"when":[10],"building":[11],"computer-assisted":[13],"surgery":[14],"system.":[15],"Current":[16],"techniques":[17],"focus":[18],"on":[19,113],"utilizing":[20,197],"convolutional":[22],"neural":[23,28],"network":[24,29],"recurrent":[27],"(CNN-RNN)":[30],"to":[31,43,48,55,73,81,102,128,142,212],"solve":[32,49,213],"the":[33,57,63,104,130,149,155,188],"surgical":[34,58,93,118,189,214],"problem.":[37,51,133],"In":[38,53],"this":[39,50],"paper,":[40],"we":[41,67],"attempt":[42],"use":[44,97],"deep":[46,207],"3DCNN":[47,70,84,208],"METHODS:":[52],"order":[54],"tackle":[56],"imbalanced":[64,131],"data":[65,132],"problem,":[66],"implement":[68],"referred":[72],"as":[74,87],"I3D-FL-PKF.":[75],"We":[76,96,108,121,134,152],"utilize":[77],"focal":[78,124,198],"loss":[79,125,199],"(FL)":[80],"train":[82],"architecture":[85],"known":[86],"Inflated":[88],"3D":[89],"ConvNet":[90],"(I3D)":[91],"for":[92,193,218],"recognition.":[95],"prior":[98,201],"knowledge":[99,202],"filtering":[100],"(PKF)":[101],"filter":[103],"results.":[106],"RESULTS:":[107],"evaluate":[109],"our":[110,137,204],"proposed":[111,156,177],"large":[115],"sleeve":[116],"gastrectomy":[117],"video":[119],"dataset.":[120],"show":[122,135,153],"that":[123,136,154],"can":[126,139,179],"help":[127],"address":[129],"PKF":[138],"be":[140],"used":[141],"generate":[143],"smoothed":[144],"prediction":[145],"results":[146],"improve":[148],"overall":[150],"accuracy.":[151],"achieves":[158],"84.16%":[159],"frame-level":[160],"accuracy":[161],"reaches":[163],"weighted":[165],"Jaccard":[166],"score":[167],"of":[168,206],"0.7327":[169],"which":[170],"outperforms":[171],"traditional":[172],"CNN-RNN":[173],"design.":[174],"CONCLUSION:":[175],"The":[176],"obtain":[180],"consistent":[181],"smooth":[183],"predictions":[184],"not":[185],"only":[186],"within":[187],"phases":[190],"but":[191],"also":[192],"phase":[194],"transitions.":[195],"By":[196],"filtering,":[203],"implementation":[205],"has":[209],"great":[210],"potential":[211],"problems":[217],"clinical":[219],"practice.":[220]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":12},{"year":2022,"cited_by_count":6}],"updated_date":"2026-07-31T08:31:51.225901","created_date":"2025-10-10T00:00:00"}
