{"id":"https://openalex.org/W4403989939","doi":"https://doi.org/10.1007/s11517-024-03227-4","title":"NSSC: a neuro-symbolic AI system for enhancing accuracy of named entity recognition and linking from oncologic clinical notes","display_name":"NSSC: a neuro-symbolic AI system for enhancing accuracy of named entity recognition and linking from oncologic clinical notes","publication_year":2024,"publication_date":"2024-11-01","ids":{"openalex":"https://openalex.org/W4403989939","doi":"https://doi.org/10.1007/s11517-024-03227-4","pmid":"https://pubmed.ncbi.nlm.nih.gov/39485651"},"language":"en","primary_location":{"id":"doi:10.1007/s11517-024-03227-4","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11517-024-03227-4","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11517-024-03227-4.pdf","source":{"id":"https://openalex.org/S46300952","display_name":"Medical & Biological Engineering & Computing","issn_l":"0140-0118","issn":["0140-0118","1741-0444"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical & Biological Engineering & Computing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s11517-024-03227-4.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023776074","display_name":"\u00c1lvaro Garc\u00eda-Barrag\u00e1n","orcid":"https://orcid.org/0009-0007-6377-8150"},"institutions":[{"id":"https://openalex.org/I4210162265","display_name":"Centre for Plant Biotechnology and Genomics","ror":"https://ror.org/04mfzb702","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210162265"]},{"id":"https://openalex.org/I88060688","display_name":"Universidad Polit\u00e9cnica de Madrid","ror":"https://ror.org/03n6nwv02","country_code":"ES","type":"education","lineage":["https://openalex.org/I88060688"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"\u00c1lvaro Garc\u00eda-Barrag\u00e1n","raw_affiliation_strings":["Center of Biomedical Technology, Universidad Polit\u00e9cnica de Madrid, Campus Montegancedo, Pozuelo de Alarc\u00f3n, 28223, Madrid, Spain. alvaro.gbarragan@upm.es","Center of Biomedical Technology, Universidad Polit\u00e9cnica de Madrid, Campus Montegancedo, Pozuelo de Alarc\u00f3n, 28223, Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"Center of Biomedical Technology, Universidad Polit\u00e9cnica de Madrid, Campus Montegancedo, Pozuelo de Alarc\u00f3n, 28223, Madrid, Spain. alvaro.gbarragan@upm.es","institution_ids":["https://openalex.org/I4210162265","https://openalex.org/I88060688"]},{"raw_affiliation_string":"Center of Biomedical Technology, Universidad Polit\u00e9cnica de Madrid, Campus Montegancedo, Pozuelo de Alarc\u00f3n, 28223, Madrid, Spain","institution_ids":["https://openalex.org/I88060688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030050607","display_name":"Ahmad Sakor","orcid":"https://orcid.org/0000-0001-8007-7021"},"institutions":[{"id":"https://openalex.org/I114112103","display_name":"Leibniz University Hannover","ror":"https://ror.org/0304hq317","country_code":"DE","type":"education","lineage":["https://openalex.org/I114112103"]},{"id":"https://openalex.org/I2802635041","display_name":"Technische Informationsbibliothek (TIB)","ror":"https://ror.org/04aj4c181","country_code":"DE","type":"archive","lineage":["https://openalex.org/I2802635041","https://openalex.org/I315704651"]},{"id":"https://openalex.org/I4210136150","display_name":"L3S Research Center","ror":"https://ror.org/039t4wk02","country_code":"DE","type":"facility","lineage":["https://openalex.org/I114112103","https://openalex.org/I4210136150","https://openalex.org/I94509681"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ahmad Sakor","raw_affiliation_strings":["Data Science Institute, Leibniz University of Hannover, Welfengarten 1, Hannover, 30060, Lower Saxony, Germany. sakor@l3s.de","Scientific Data Management Group, TIB-Leibniz Information Centre for Science and Technology, Welfengarten 1B, Hannover, 30167, Lower Saxony, Germany. sakor@l3s.de","Data Science Institute, Leibniz University of Hannover, Welfengarten 1, Hannover, 30060, Lower Saxony, Germany"],"affiliations":[{"raw_affiliation_string":"Data Science Institute, Leibniz University of Hannover, Welfengarten 1, Hannover, 30060, Lower Saxony, Germany. sakor@l3s.de","institution_ids":["https://openalex.org/I114112103","https://openalex.org/I4210136150"]},{"raw_affiliation_string":"Scientific Data Management Group, TIB-Leibniz Information Centre for Science and Technology, Welfengarten 1B, Hannover, 30167, Lower Saxony, Germany. sakor@l3s.de","institution_ids":["https://openalex.org/I2802635041"]},{"raw_affiliation_string":"Data Science Institute, Leibniz University of Hannover, Welfengarten 1, Hannover, 30060, Lower Saxony, Germany","institution_ids":["https://openalex.org/I114112103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055433807","display_name":"Mar\u00eda-Esther Vidal","orcid":"https://orcid.org/0000-0003-1160-8727"},"institutions":[{"id":"https://openalex.org/I114112103","display_name":"Leibniz University Hannover","ror":"https://ror.org/0304hq317","country_code":"DE","type":"education","lineage":["https://openalex.org/I114112103"]},{"id":"https://openalex.org/I2802635041","display_name":"Technische Informationsbibliothek (TIB)","ror":"https://ror.org/04aj4c181","country_code":"DE","type":"archive","lineage":["https://openalex.org/I2802635041","https://openalex.org/I315704651"]},{"id":"https://openalex.org/I4210136150","display_name":"L3S Research Center","ror":"https://ror.org/039t4wk02","country_code":"DE","type":"facility","lineage":["https://openalex.org/I114112103","https://openalex.org/I4210136150","https://openalex.org/I94509681"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Maria-Esther Vidal","raw_affiliation_strings":["Data Science Institute, Leibniz University of Hannover, Welfengarten 1, Hannover, 30060, Lower Saxony, Germany. vidal@l3s.de","Scientific Data Management Group, TIB-Leibniz Information Centre for Science and Technology, Welfengarten 1B, Hannover, 30167, Lower Saxony, Germany. vidal@l3s.de","Data Science Institute, Leibniz University of Hannover, Welfengarten 1, Hannover, 30060, Lower Saxony, Germany"],"affiliations":[{"raw_affiliation_string":"Data Science Institute, Leibniz University of Hannover, Welfengarten 1, Hannover, 30060, Lower Saxony, Germany. vidal@l3s.de","institution_ids":["https://openalex.org/I114112103","https://openalex.org/I4210136150"]},{"raw_affiliation_string":"Scientific Data Management Group, TIB-Leibniz Information Centre for Science and Technology, Welfengarten 1B, Hannover, 30167, Lower Saxony, Germany. vidal@l3s.de","institution_ids":["https://openalex.org/I2802635041"]},{"raw_affiliation_string":"Data Science Institute, Leibniz University of Hannover, Welfengarten 1, Hannover, 30060, Lower Saxony, Germany","institution_ids":["https://openalex.org/I114112103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078567927","display_name":"Ernestina Menasalvas","orcid":"https://orcid.org/0000-0002-5615-6798"},"institutions":[{"id":"https://openalex.org/I4210162265","display_name":"Centre for Plant Biotechnology and Genomics","ror":"https://ror.org/04mfzb702","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210162265"]},{"id":"https://openalex.org/I88060688","display_name":"Universidad Polit\u00e9cnica de Madrid","ror":"https://ror.org/03n6nwv02","country_code":"ES","type":"education","lineage":["https://openalex.org/I88060688"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Ernestina Menasalvas","raw_affiliation_strings":["Center of Biomedical Technology, Universidad Polit\u00e9cnica de Madrid, Campus Montegancedo, Pozuelo de Alarc\u00f3n, 28223, Madrid, Spain. ernestina.menasalvas@upm.es","Center of Biomedical Technology, Universidad Polit\u00e9cnica de Madrid, Campus Montegancedo, Pozuelo de Alarc\u00f3n, 28223, Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"Center of Biomedical Technology, Universidad Polit\u00e9cnica de Madrid, Campus Montegancedo, Pozuelo de Alarc\u00f3n, 28223, Madrid, Spain. ernestina.menasalvas@upm.es","institution_ids":["https://openalex.org/I88060688","https://openalex.org/I4210162265"]},{"raw_affiliation_string":"Center of Biomedical Technology, Universidad Polit\u00e9cnica de Madrid, Campus Montegancedo, Pozuelo de Alarc\u00f3n, 28223, Madrid, Spain","institution_ids":["https://openalex.org/I88060688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005124189","display_name":"Jos\u00e9 \u00c1ngel Gonz\u00e1lez","orcid":"https://orcid.org/0000-0003-3812-5792"},"institutions":[{"id":"https://openalex.org/I4210105637","display_name":"Hospital Universitario Puerta de Hierro Majadahonda","ror":"https://ror.org/01e57nb43","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210105637","https://openalex.org/I4210139293"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Juan Cristobal Sanchez Gonzalez","raw_affiliation_strings":["Oncology, Hospital Puerta de Hierro, Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"Oncology, Hospital Puerta de Hierro, Madrid, Spain","institution_ids":["https://openalex.org/I4210105637"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085499011","display_name":"Mariano Provencio","orcid":"https://orcid.org/0000-0001-6315-7919"},"institutions":[{"id":"https://openalex.org/I4210105637","display_name":"Hospital Universitario Puerta de Hierro Majadahonda","ror":"https://ror.org/01e57nb43","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210105637","https://openalex.org/I4210139293"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Mariano Provencio","raw_affiliation_strings":["Oncology, Hospital Puerta de Hierro, Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"Oncology, Hospital Puerta de Hierro, Madrid, Spain","institution_ids":["https://openalex.org/I4210105637"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035271106","display_name":"V\u0131\u0301ctor Robles","orcid":"https://orcid.org/0000-0003-3937-2269"},"institutions":[{"id":"https://openalex.org/I4210162265","display_name":"Centre for Plant Biotechnology and Genomics","ror":"https://ror.org/04mfzb702","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210162265"]},{"id":"https://openalex.org/I88060688","display_name":"Universidad Polit\u00e9cnica de Madrid","ror":"https://ror.org/03n6nwv02","country_code":"ES","type":"education","lineage":["https://openalex.org/I88060688"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"V\u00edctor Robles","raw_affiliation_strings":["Center of Biomedical Technology, Universidad Polit\u00e9cnica de Madrid, Campus Montegancedo, Pozuelo de Alarc\u00f3n, 28223, Madrid, Spain. victor.robles@upm.es","Center of Biomedical Technology, Universidad Polit\u00e9cnica de Madrid, Campus Montegancedo, Pozuelo de Alarc\u00f3n, 28223, Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"Center of Biomedical Technology, Universidad Polit\u00e9cnica de Madrid, Campus Montegancedo, Pozuelo de Alarc\u00f3n, 28223, Madrid, Spain. victor.robles@upm.es","institution_ids":["https://openalex.org/I88060688","https://openalex.org/I4210162265"]},{"raw_affiliation_string":"Center of Biomedical Technology, Universidad Polit\u00e9cnica de Madrid, Campus Montegancedo, Pozuelo de Alarc\u00f3n, 28223, Madrid, Spain","institution_ids":["https://openalex.org/I88060688"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5023776074"],"corresponding_institution_ids":["https://openalex.org/I4210162265","https://openalex.org/I88060688"],"apc_list":{"value":2890,"currency":"EUR","value_usd":3690},"apc_paid":{"value":2890,"currency":"EUR","value_usd":3690},"fwci":2.7372,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.90968399,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"63","issue":"3","first_page":"749","last_page":"772"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/human-physiology","display_name":"Human physiology","score":0.7360727787017822},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5129746794700623},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4824865162372589},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.32910656929016113},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2520924508571625},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.08608877658843994}],"concepts":[{"id":"https://openalex.org/C2986265897","wikidata":"https://www.wikidata.org/wiki/Q23852","display_name":"Human physiology","level":2,"score":0.7360727787017822},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5129746794700623},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4824865162372589},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.32910656929016113},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2520924508571625},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.08608877658843994}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1007/s11517-024-03227-4","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11517-024-03227-4","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11517-024-03227-4.pdf","source":{"id":"https://openalex.org/S46300952","display_name":"Medical & Biological Engineering & Computing","issn_l":"0140-0118","issn":["0140-0118","1741-0444"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical & Biological Engineering & Computing","raw_type":"journal-article"},{"id":"pmid:39485651","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39485651","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical & biological engineering & computing","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11891111","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11891111","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11891111/pdf/11517_2024_Article_3227.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Med Biol Eng Comput","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1007/s11517-024-03227-4","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11517-024-03227-4","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11517-024-03227-4.pdf","source":{"id":"https://openalex.org/S46300952","display_name":"Medical & Biological Engineering & Computing","issn_l":"0140-0118","issn":["0140-0118","1741-0444"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical & Biological Engineering & Computing","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.4699999988079071}],"awards":[{"id":"https://openalex.org/G1230912502","display_name":null,"funder_award_id":"P99/2020","funder_id":"https://openalex.org/F4320334763","funder_display_name":"Leibniz-Gemeinschaft"},{"id":"https://openalex.org/G1461659307","display_name":null,"funder_award_id":"875160","funder_id":"https://openalex.org/F4320334322","funder_display_name":"HORIZON EUROPE Framework Programme"},{"id":"https://openalex.org/G8051717526","display_name":null,"funder_award_id":"Grant","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8112075043","display_name":null,"funder_award_id":"875160","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8318064016","display_name":null,"funder_award_id":"Horizon","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320334322","display_name":"HORIZON EUROPE Framework Programme","ror":null},{"id":"https://openalex.org/F4320334763","display_name":"Leibniz-Gemeinschaft","ror":"https://ror.org/01n6r0e97"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4403989939.pdf"},"referenced_works_count":68,"referenced_works":["https://openalex.org/W102708294","https://openalex.org/W1784290353","https://openalex.org/W1851477384","https://openalex.org/W2012560661","https://openalex.org/W2038880450","https://openalex.org/W2067792343","https://openalex.org/W2104085672","https://openalex.org/W2613482391","https://openalex.org/W2786894136","https://openalex.org/W2808129629","https://openalex.org/W2915623326","https://openalex.org/W2945214661","https://openalex.org/W2946606955","https://openalex.org/W2950023917","https://openalex.org/W2952826391","https://openalex.org/W2966220012","https://openalex.org/W2970119519","https://openalex.org/W2970463839","https://openalex.org/W2978511610","https://openalex.org/W2997028620","https://openalex.org/W2997110185","https://openalex.org/W2998098272","https://openalex.org/W3000344024","https://openalex.org/W3004227146","https://openalex.org/W3011594683","https://openalex.org/W3016682305","https://openalex.org/W3030645549","https://openalex.org/W3032553678","https://openalex.org/W3034229721","https://openalex.org/W3035097673","https://openalex.org/W3039996909","https://openalex.org/W3047190783","https://openalex.org/W3094215866","https://openalex.org/W3096833298","https://openalex.org/W3099035367","https://openalex.org/W3099252223","https://openalex.org/W3100283070","https://openalex.org/W3102144021","https://openalex.org/W3104748221","https://openalex.org/W3106224367","https://openalex.org/W3112302290","https://openalex.org/W3122634526","https://openalex.org/W3147562045","https://openalex.org/W3167128805","https://openalex.org/W3170822064","https://openalex.org/W3174142355","https://openalex.org/W3175096440","https://openalex.org/W3198980621","https://openalex.org/W3205598244","https://openalex.org/W3211032748","https://openalex.org/W4205149420","https://openalex.org/W4213454368","https://openalex.org/W4220913575","https://openalex.org/W4224299761","https://openalex.org/W4252076394","https://openalex.org/W4287887705","https://openalex.org/W4293812347","https://openalex.org/W4384382793","https://openalex.org/W4384517818","https://openalex.org/W4385431852","https://openalex.org/W4387084575","https://openalex.org/W4390284935","https://openalex.org/W4391742634","https://openalex.org/W4392151673","https://openalex.org/W4400097697","https://openalex.org/W4401103297","https://openalex.org/W6601700763","https://openalex.org/W6967690769"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W3204019825"],"abstract_inverted_index":{"Accurate":[0],"recognition":[1,44,94,127],"and":[2,22,46,95,109,128,159],"linking":[3,48,96],"of":[4,78,91,130],"oncologic":[5,131],"entities":[6],"in":[7,88,146,156],"clinical":[8,20,53,79,151],"notes":[9,54,80],"is":[10],"essential":[11],"for":[12,30],"extracting":[13,147],"insights":[14],"across":[15],"cancer":[16,83,157],"research,":[17],"patient":[18,161],"care,":[19],"decision-making,":[21],"treatment":[23],"optimization.":[24],"We":[25],"present":[26],"the":[27,62,89,126],"Neuro-Symbolic":[28],"System":[29,66],"Cancer":[31],"(NSSC),":[32],"a":[33,69,76,104,110,143],"hybrid":[34],"AI":[35],"framework":[36],"that":[37],"integrates":[38],"neurosymbolic":[39],"methods":[40],"with":[41,61,121,136],"named":[42],"entity":[43,47,93],"(NER)":[45],"(EL)":[49],"to":[50,98],"transform":[51],"unstructured":[52],"into":[55],"structured":[56],"terms":[57],"using":[58],"medical":[59],"vocabularies,":[60],"Unified":[63],"Medical":[64],"Language":[65],"(UMLS)":[67],"as":[68],"case":[70],"study.":[71],"NSSC":[72,102,124],"was":[73],"evaluated":[74],"on":[75],"dataset":[77],"from":[81,150],"breast":[82],"patients,":[84],"demonstrating":[85],"significant":[86,144],"improvements":[87],"accuracy":[90],"both":[92],"compared":[97],"state-of-the-art":[99],"models.":[100],"Specifically,":[101],"achieved":[103],"33%":[105],"improvement":[106,112],"over":[107,113],"BioFalcon":[108],"58%":[111],"scispaCy.":[114],"By":[115],"combining":[116],"large":[117],"language":[118],"models":[119],"(LLMs)":[120],"symbolic":[122],"reasoning,":[123],"improves":[125],"interoperability":[129],"entities,":[132],"enabling":[133],"seamless":[134],"integration":[135],"existing":[137],"biomedical":[138],"knowledge.":[139],"This":[140],"approach":[141],"marks":[142],"advancement":[145],"meaningful":[148],"information":[149],"narratives,":[152],"offering":[153],"promising":[154],"applications":[155],"research":[158],"personalized":[160],"care.":[162]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":7}],"updated_date":"2026-04-13T07:58:08.660418","created_date":"2025-10-10T00:00:00"}