{"id":"https://openalex.org/W3155218161","doi":"https://doi.org/10.1007/s11517-021-02359-1","title":"Contextual embedding bootstrapped neural network for medical information extraction of coronary artery disease records","display_name":"Contextual embedding bootstrapped neural network for medical information extraction of coronary artery disease records","publication_year":2021,"publication_date":"2021-04-23","ids":{"openalex":"https://openalex.org/W3155218161","doi":"https://doi.org/10.1007/s11517-021-02359-1","mag":"3155218161","pmid":"https://pubmed.ncbi.nlm.nih.gov/33893606"},"language":"en","primary_location":{"id":"doi:10.1007/s11517-021-02359-1","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11517-021-02359-1","pdf_url":null,"source":{"id":"https://openalex.org/S46300952","display_name":"Medical & Biological Engineering & Computing","issn_l":"0140-0118","issn":["0140-0118","1741-0444"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical & Biological Engineering & Computing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042674296","display_name":"Xingxing Cen","orcid":null},"institutions":[{"id":"https://openalex.org/I2802608112","display_name":"Shanghai Chest Hospital","ror":"https://ror.org/03fjc3817","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802608112"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xingxing Cen","raw_affiliation_strings":["Shanghai Chest Hospital, Shanghai Jiaotong University, 241 West Huaihai Road, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Chest Hospital, Shanghai Jiaotong University, 241 West Huaihai Road, Shanghai, China","institution_ids":["https://openalex.org/I2802608112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071835883","display_name":"Junyi Yuan","orcid":"https://orcid.org/0000-0002-3143-1343"},"institutions":[{"id":"https://openalex.org/I2802608112","display_name":"Shanghai Chest Hospital","ror":"https://ror.org/03fjc3817","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802608112"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junyi Yuan","raw_affiliation_strings":["Shanghai Chest Hospital, Shanghai Jiaotong University, 241 West Huaihai Road, Shanghai, China. yjy1478@shchest.org","Shanghai Chest Hospital, Shanghai Jiaotong University, 241 West Huaihai Road, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Chest Hospital, Shanghai Jiaotong University, 241 West Huaihai Road, Shanghai, China. yjy1478@shchest.org","institution_ids":[]},{"raw_affiliation_string":"Shanghai Chest Hospital, Shanghai Jiaotong University, 241 West Huaihai Road, Shanghai, China","institution_ids":["https://openalex.org/I2802608112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103239008","display_name":"Changqing Pan","orcid":"https://orcid.org/0000-0002-8294-4640"},"institutions":[{"id":"https://openalex.org/I2802608112","display_name":"Shanghai Chest Hospital","ror":"https://ror.org/03fjc3817","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802608112"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Changqing Pan","raw_affiliation_strings":["Shanghai Chest Hospital, Shanghai Jiaotong University, 241 West Huaihai Road, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Chest Hospital, Shanghai Jiaotong University, 241 West Huaihai Road, Shanghai, China","institution_ids":["https://openalex.org/I2802608112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004752467","display_name":"Qinhua Tang","orcid":null},"institutions":[{"id":"https://openalex.org/I2802608112","display_name":"Shanghai Chest Hospital","ror":"https://ror.org/03fjc3817","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802608112"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qinhua Tang","raw_affiliation_strings":["Shanghai Chest Hospital, Shanghai Jiaotong University, 241 West Huaihai Road, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Chest Hospital, Shanghai Jiaotong University, 241 West Huaihai Road, Shanghai, China","institution_ids":["https://openalex.org/I2802608112"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025080179","display_name":"Qunsheng Ma","orcid":null},"institutions":[{"id":"https://openalex.org/I2802608112","display_name":"Shanghai Chest Hospital","ror":"https://ror.org/03fjc3817","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802608112"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qunsheng Ma","raw_affiliation_strings":["Shanghai Chest Hospital, Shanghai Jiaotong University, 241 West Huaihai Road, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Chest Hospital, Shanghai Jiaotong University, 241 West Huaihai Road, Shanghai, China","institution_ids":["https://openalex.org/I2802608112"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5042674296"],"corresponding_institution_ids":["https://openalex.org/I2802608112"],"apc_list":{"value":2890,"currency":"EUR","value_usd":3690},"apc_paid":null,"fwci":0.699,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.75409593,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"59","issue":"5","first_page":"1111","last_page":"1121"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11396","display_name":"Artificial Intelligence in Healthcare","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cad","display_name":"CAD","score":0.8382017612457275},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6685377359390259},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.6537307500839233},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6021355986595154},{"id":"https://openalex.org/keywords/coronary-artery-disease","display_name":"Coronary artery disease","score":0.5947657227516174},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5532882213592529},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5511311888694763},{"id":"https://openalex.org/keywords/medical-record","display_name":"Medical record","score":0.4900897741317749},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.48386943340301514},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4819328784942627},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3869333267211914},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.32797005772590637},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.20055919885635376},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.15349525213241577},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.13882017135620117},{"id":"https://openalex.org/keywords/engineering-drawing","display_name":"Engineering drawing","score":0.10786309838294983}],"concepts":[{"id":"https://openalex.org/C194789388","wikidata":"https://www.wikidata.org/wiki/Q17855283","display_name":"CAD","level":2,"score":0.8382017612457275},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6685377359390259},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.6537307500839233},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6021355986595154},{"id":"https://openalex.org/C2778213512","wikidata":"https://www.wikidata.org/wiki/Q844935","display_name":"Coronary artery disease","level":2,"score":0.5947657227516174},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5532882213592529},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5511311888694763},{"id":"https://openalex.org/C195910791","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Medical record","level":2,"score":0.4900897741317749},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.48386943340301514},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4819328784942627},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3869333267211914},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.32797005772590637},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.20055919885635376},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.15349525213241577},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.13882017135620117},{"id":"https://openalex.org/C199639397","wikidata":"https://www.wikidata.org/wiki/Q1788588","display_name":"Engineering drawing","level":1,"score":0.10786309838294983}],"mesh":[{"descriptor_ui":"D003324","descriptor_name":"Coronary Artery Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003324","descriptor_name":"Coronary Artery Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003324","descriptor_name":"Coronary Artery Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1007/s11517-021-02359-1","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11517-021-02359-1","pdf_url":null,"source":{"id":"https://openalex.org/S46300952","display_name":"Medical & Biological Engineering & Computing","issn_l":"0140-0118","issn":["0140-0118","1741-0444"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical & Biological Engineering & Computing","raw_type":"journal-article"},{"id":"pmid:33893606","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33893606","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical & biological engineering & computing","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8091065676","display_name":null,"funder_award_id":"XX-XXFZ-02-20-2042","funder_id":"https://openalex.org/F4320325413","funder_display_name":"Shanghai Municipal Commission of Economy and Informatization"}],"funders":[{"id":"https://openalex.org/F4320325413","display_name":"Shanghai Municipal Commission of Economy and Informatization","ror":"https://ror.org/04166ws88"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1840435438","https://openalex.org/W2004910511","https://openalex.org/W2028140375","https://openalex.org/W2082302018","https://openalex.org/W2134036914","https://openalex.org/W2153579005","https://openalex.org/W2231920551","https://openalex.org/W2250539671","https://openalex.org/W2311710622","https://openalex.org/W2341587966","https://openalex.org/W2493916176","https://openalex.org/W2500334081","https://openalex.org/W2755507768","https://openalex.org/W2765521139","https://openalex.org/W2771901310","https://openalex.org/W2793292756","https://openalex.org/W2803098482","https://openalex.org/W2895223087","https://openalex.org/W2896457183","https://openalex.org/W2898355739","https://openalex.org/W2898665243","https://openalex.org/W2950938254","https://openalex.org/W2953505302","https://openalex.org/W2955483668","https://openalex.org/W2962739339","https://openalex.org/W2971262600","https://openalex.org/W2971668428","https://openalex.org/W2981521947","https://openalex.org/W3013571468","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W2625833328","https://openalex.org/W1533177136","https://openalex.org/W4380994516","https://openalex.org/W2295917292"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}