{"id":"https://openalex.org/W2038695291","doi":"https://doi.org/10.1007/s11390-012-1219-y","title":"Computational Challenges in Characterization of Bacteria and Bacteria-Host Interactions Based on Genomic Data","display_name":"Computational Challenges in Characterization of Bacteria and Bacteria-Host Interactions Based on Genomic Data","publication_year":2012,"publication_date":"2012-03-01","ids":{"openalex":"https://openalex.org/W2038695291","doi":"https://doi.org/10.1007/s11390-012-1219-y","mag":"2038695291"},"language":"en","primary_location":{"id":"doi:10.1007/s11390-012-1219-y","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11390-012-1219-y","pdf_url":null,"source":{"id":"https://openalex.org/S161516442","display_name":"Journal of Computer Science and Technology","issn_l":"1000-9000","issn":["1000-9000","1860-4749"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer Science and Technology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060215226","display_name":"Chao Zhang","orcid":"https://orcid.org/0000-0001-8019-7998"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chao Zhang","raw_affiliation_strings":["Department of Computer Science, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, U.S.A","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100993523","display_name":"Guolu Zheng","orcid":"https://orcid.org/0000-0001-8428-2911"},"institutions":[{"id":"https://openalex.org/I151651118","display_name":"Lincoln University - Missouri","ror":"https://ror.org/05hn3aw08","country_code":"US","type":"education","lineage":["https://openalex.org/I151651118"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Guolu Zheng","raw_affiliation_strings":["Department of Agriculture and Environmental Science, Lincoln University, Jefferson City, MO, 65101, U.S.A","Department of Agriculture and Environmental Science, Lincoln University, Jefferson City, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Agriculture and Environmental Science, Lincoln University, Jefferson City, MO, 65101, U.S.A","institution_ids":["https://openalex.org/I151651118"]},{"raw_affiliation_string":"Department of Agriculture and Environmental Science, Lincoln University, Jefferson City, U.S.A","institution_ids":["https://openalex.org/I151651118"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100679386","display_name":"Shunfu Xu","orcid":"https://orcid.org/0000-0003-2975-3682"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shun-Fu Xu","raw_affiliation_strings":["Department of Gastroenterology, The First Affiliated Hospital of Nanjing Medical University, Jiangsu, 210029, China","Department of Gastroenterology, the First Affiliated Hospital of Nanjing Medical University, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Gastroenterology, The First Affiliated Hospital of Nanjing Medical University, Jiangsu, 210029, China","institution_ids":["https://openalex.org/I83519826"]},{"raw_affiliation_string":"Department of Gastroenterology, the First Affiliated Hospital of Nanjing Medical University, Jiangsu, China","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082428303","display_name":"Dong Xu","orcid":"https://orcid.org/0000-0002-4809-0514"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dong Xu","raw_affiliation_strings":["Department of Computer Science, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, U.S.A","institution_ids":["https://openalex.org/I76835614"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3090,"currency":"USD","value_usd":3090},"apc_paid":null,"fwci":0.492,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.62228487,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"27","issue":"2","first_page":"225","last_page":"239"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10141","display_name":"Probiotics and Fermented Foods","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7338459491729736},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.7234890460968018},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.7023277282714844},{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.5589689016342163},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5283556580543518},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.44762158393859863},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2742513418197632},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10548979043960571},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.06410735845565796}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7338459491729736},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.7234890460968018},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.7023277282714844},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.5589689016342163},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5283556580543518},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.44762158393859863},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2742513418197632},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10548979043960571},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.06410735845565796},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s11390-012-1219-y","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11390-012-1219-y","pdf_url":null,"source":{"id":"https://openalex.org/S161516442","display_name":"Journal of Computer Science and Technology","issn_l":"1000-9000","issn":["1000-9000","1860-4749"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer Science and Technology","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.4699999988079071}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":121,"referenced_works":["https://openalex.org/W5935772","https://openalex.org/W1485044783","https://openalex.org/W1494447663","https://openalex.org/W1520752435","https://openalex.org/W1560556066","https://openalex.org/W1942421281","https://openalex.org/W1967850793","https://openalex.org/W1971403296","https://openalex.org/W1972031592","https://openalex.org/W1985343690","https://openalex.org/W1988925586","https://openalex.org/W1989348205","https://openalex.org/W1992155056","https://openalex.org/W1993880074","https://openalex.org/W1995356937","https://openalex.org/W1998601670","https://openalex.org/W1999113425","https://openalex.org/W2002422491","https://openalex.org/W2006069224","https://openalex.org/W2007447692","https://openalex.org/W2008627263","https://openalex.org/W2013341027","https://openalex.org/W2015336843","https://openalex.org/W2017016576","https://openalex.org/W2020302957","https://openalex.org/W2025153546","https://openalex.org/W2029943794","https://openalex.org/W2030154486","https://openalex.org/W2032230795","https://openalex.org/W2034082915","https://openalex.org/W2035556774","https://openalex.org/W2036647435","https://openalex.org/W2038746475","https://openalex.org/W2042893247","https://openalex.org/W2045512872","https://openalex.org/W2052717138","https://openalex.org/W2055043387","https://openalex.org/W2057666568","https://openalex.org/W2059005097","https://openalex.org/W2059237622","https://openalex.org/W2060302211","https://openalex.org/W2062132676","https://openalex.org/W2066011810","https://openalex.org/W2066452478","https://openalex.org/W2068687524","https://openalex.org/W2069378448","https://openalex.org/W2069990380","https://openalex.org/W2071260145","https://openalex.org/W2072970694","https://openalex.org/W2078347942","https://openalex.org/W2091922579","https://openalex.org/W2100539938","https://openalex.org/W2103546861","https://openalex.org/W2103970813","https://openalex.org/W2105807803","https://openalex.org/W2109781417","https://openalex.org/W2110008268","https://openalex.org/W2110713840","https://openalex.org/W2111458006","https://openalex.org/W2113672069","https://openalex.org/W2113900004","https://openalex.org/W2114156535","https://openalex.org/W2116895571","https://openalex.org/W2118001436","https://openalex.org/W2118040479","https://openalex.org/W2120895683","https://openalex.org/W2121152355","https://openalex.org/W2121762798","https://openalex.org/W2122233144","https://openalex.org/W2122365984","https://openalex.org/W2124635565","https://openalex.org/W2126627383","https://openalex.org/W2126987356","https://openalex.org/W2128124531","https://openalex.org/W2131186249","https://openalex.org/W2132632499","https://openalex.org/W2132926880","https://openalex.org/W2135365149","https://openalex.org/W2136625447","https://openalex.org/W2137015675","https://openalex.org/W2137090500","https://openalex.org/W2137548384","https://openalex.org/W2139809552","https://openalex.org/W2140163059","https://openalex.org/W2141254741","https://openalex.org/W2141596633","https://openalex.org/W2142065401","https://openalex.org/W2142503351","https://openalex.org/W2146828922","https://openalex.org/W2148171419","https://openalex.org/W2148445708","https://openalex.org/W2149064303","https://openalex.org/W2149573313","https://openalex.org/W2150337627","https://openalex.org/W2150484441","https://openalex.org/W2151831732","https://openalex.org/W2152076149","https://openalex.org/W2152885278","https://openalex.org/W2153139855","https://openalex.org/W2153990926","https://openalex.org/W2154969423","https://openalex.org/W2155066423","https://openalex.org/W2155142785","https://openalex.org/W2155258759","https://openalex.org/W2155701046","https://openalex.org/W2155806125","https://openalex.org/W2155880194","https://openalex.org/W2156841201","https://openalex.org/W2158658436","https://openalex.org/W2158795865","https://openalex.org/W2158877985","https://openalex.org/W2159008215","https://openalex.org/W2159406441","https://openalex.org/W2166865790","https://openalex.org/W2169330513","https://openalex.org/W2171963266","https://openalex.org/W2184417913","https://openalex.org/W2395423180","https://openalex.org/W2912979477","https://openalex.org/W4211040199","https://openalex.org/W4248422417"],"related_works":["https://openalex.org/W2210738511","https://openalex.org/W2474302342","https://openalex.org/W1910109602","https://openalex.org/W4297131566","https://openalex.org/W2017364432","https://openalex.org/W2080583581","https://openalex.org/W3037682416","https://openalex.org/W3158976456","https://openalex.org/W4285082713","https://openalex.org/W2102118387"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
