{"id":"https://openalex.org/W2086072057","doi":"https://doi.org/10.1007/s11265-007-0087-0","title":"Biosequence Similarity Search on the Mercury System","display_name":"Biosequence Similarity Search on the Mercury System","publication_year":2007,"publication_date":"2007-07-10","ids":{"openalex":"https://openalex.org/W2086072057","doi":"https://doi.org/10.1007/s11265-007-0087-0","mag":"2086072057","pmid":"https://pubmed.ncbi.nlm.nih.gov/18846267"},"language":"en","primary_location":{"id":"doi:10.1007/s11265-007-0087-0","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11265-007-0087-0","pdf_url":null,"source":{"id":"https://openalex.org/S4210233059","display_name":"The Journal of VLSI Signal Processing Systems for Signal Image and Video Technology","issn_l":"0922-5773","issn":["0922-5773","1573-109X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of VLSI Signal Processing Systems for Signal, Image, and Video Technology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2564817","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027192697","display_name":"Praveen Thaggikuppe Krishnamurthy","orcid":"https://orcid.org/0000-0003-2666-0878"},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Praveen Krishnamurthy","raw_affiliation_strings":["Department of Computer Science and Engineering Washington University in St. Louis","Department of Computer Science and Engineering, Washington University, St. Louis, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering Washington University in St. Louis","institution_ids":["https://openalex.org/I204465549"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080937008","display_name":"Jeremy Buhler","orcid":"https://orcid.org/0000-0002-4159-4226"},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeremy Buhler","raw_affiliation_strings":["Department of Computer Science and Engineering, Washington University, St. Louis, MO, USA","Department of Computer Science and Engineering, Washington University, St. Louis, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006814645","display_name":"Roger D. Chamberlain","orcid":"https://orcid.org/0000-0002-7207-6106"},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Roger Chamberlain","raw_affiliation_strings":["Department of Computer Science and Engineering, Washington University, St. Louis, MO, USA","Department of Computer Science and Engineering, Washington University, St. Louis, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103563859","display_name":"Mark A. Franklin","orcid":null},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark Franklin","raw_affiliation_strings":["Department of Computer Science and Engineering, Washington University, St. Louis, MO, USA","Department of Computer Science and Engineering, Washington University, St. Louis, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006772859","display_name":"Kwame Gyang","orcid":null},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kwame Gyang","raw_affiliation_strings":["Department of Computer Science and Engineering, Washington University, St. Louis, MO, USA","Department of Computer Science and Engineering, Washington University, St. Louis, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105839606","display_name":"Arpith C. Jacob","orcid":null},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arpith Jacob","raw_affiliation_strings":["Department of Computer Science and Engineering, Washington University, St. Louis, MO, USA","Department of Computer Science and Engineering, Washington University, St. Louis, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5050179788","display_name":"Joseph M. Lancaster","orcid":null},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph Lancaster","raw_affiliation_strings":["Department of Computer Science and Engineering, Washington University, St. Louis, MO, USA","Department of Computer Science and Engineering, Washington University, St. Louis, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Washington University, St. Louis, USA","institution_ids":["https://openalex.org/I204465549"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5027192697"],"corresponding_institution_ids":["https://openalex.org/I204465549"],"apc_list":null,"apc_paid":null,"fwci":2.9608,"has_fulltext":false,"cited_by_count":48,"citation_normalized_percentile":{"value":0.91439928,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"49","issue":"1","first_page":"101","last_page":"121"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.685189425945282},{"id":"https://openalex.org/keywords/mercury","display_name":"Mercury (programming language)","score":0.5629087090492249},{"id":"https://openalex.org/keywords/nearest-neighbor-search","display_name":"Nearest neighbor search","score":0.4733448326587677},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.42913123965263367},{"id":"https://openalex.org/keywords/extensional-definition","display_name":"Extensional definition","score":0.4287780225276947},{"id":"https://openalex.org/keywords/computer-architecture","display_name":"Computer architecture","score":0.36823463439941406},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.14541199803352356},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13369140028953552}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.685189425945282},{"id":"https://openalex.org/C2777777548","wikidata":"https://www.wikidata.org/wiki/Q206040","display_name":"Mercury (programming language)","level":2,"score":0.5629087090492249},{"id":"https://openalex.org/C116738811","wikidata":"https://www.wikidata.org/wiki/Q608751","display_name":"Nearest neighbor search","level":2,"score":0.4733448326587677},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.42913123965263367},{"id":"https://openalex.org/C136137745","wikidata":"https://www.wikidata.org/wiki/Q19515659","display_name":"Extensional definition","level":3,"score":0.4287780225276947},{"id":"https://openalex.org/C118524514","wikidata":"https://www.wikidata.org/wiki/Q173212","display_name":"Computer architecture","level":1,"score":0.36823463439941406},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.14541199803352356},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13369140028953552},{"id":"https://openalex.org/C77928131","wikidata":"https://www.wikidata.org/wiki/Q193343","display_name":"Tectonics","level":2,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/s11265-007-0087-0","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11265-007-0087-0","pdf_url":null,"source":{"id":"https://openalex.org/S4210233059","display_name":"The Journal of VLSI Signal Processing Systems for Signal Image and Video Technology","issn_l":"0922-5773","issn":["0922-5773","1573-109X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of VLSI Signal Processing Systems for Signal, Image, and Video Technology","raw_type":"journal-article"},{"id":"pmid:18846267","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18846267","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of VLSI signal processing systems for signal, image, and video technology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2564817","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2564817","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J VLSI Signal Process Syst Signal Image Video Technol","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:2564817","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2564817","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J VLSI Signal Process Syst Signal Image Video Technol","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":38,"referenced_works":["https://openalex.org/W69395926","https://openalex.org/W180566773","https://openalex.org/W803629318","https://openalex.org/W1955121107","https://openalex.org/W2027266885","https://openalex.org/W2051049045","https://openalex.org/W2052207834","https://openalex.org/W2052890777","https://openalex.org/W2055666215","https://openalex.org/W2060022314","https://openalex.org/W2072763119","https://openalex.org/W2080285119","https://openalex.org/W2084325555","https://openalex.org/W2086559686","https://openalex.org/W2087064593","https://openalex.org/W2099978886","https://openalex.org/W2101664494","https://openalex.org/W2111617782","https://openalex.org/W2116967744","https://openalex.org/W2123534476","https://openalex.org/W2123845384","https://openalex.org/W2126992668","https://openalex.org/W2131989567","https://openalex.org/W2133718097","https://openalex.org/W2136145671","https://openalex.org/W2140533883","https://openalex.org/W2142574874","https://openalex.org/W2142619120","https://openalex.org/W2151464048","https://openalex.org/W2158714788","https://openalex.org/W2161554125","https://openalex.org/W2163837292","https://openalex.org/W2169855483","https://openalex.org/W2912435829","https://openalex.org/W2914015934","https://openalex.org/W4238808508","https://openalex.org/W4245861326","https://openalex.org/W6607343744"],"related_works":["https://openalex.org/W2050515154","https://openalex.org/W2266983138","https://openalex.org/W2066916115","https://openalex.org/W1990269663","https://openalex.org/W2082425661","https://openalex.org/W2317577920","https://openalex.org/W2024165592","https://openalex.org/W2500008054","https://openalex.org/W3005719954","https://openalex.org/W2026418612"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":2}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}