{"id":"https://openalex.org/W4297473636","doi":"https://doi.org/10.1007/s11227-022-04809-5","title":"Representation of gene regulation networks by hypothesis logic-based Boolean systems","display_name":"Representation of gene regulation networks by hypothesis logic-based Boolean systems","publication_year":2022,"publication_date":"2022-09-28","ids":{"openalex":"https://openalex.org/W4297473636","doi":"https://doi.org/10.1007/s11227-022-04809-5"},"language":"en","primary_location":{"id":"doi:10.1007/s11227-022-04809-5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11227-022-04809-5","pdf_url":null,"source":{"id":"https://openalex.org/S32326811","display_name":"The Journal of Supercomputing","issn_l":"0920-8542","issn":["0920-8542","1573-0484"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of Supercomputing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://hal.science/hal-04022466/document","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079940268","display_name":"Pierre Siegel","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I21491767","display_name":"Aix-Marseille Universit\u00e9","ror":"https://ror.org/035xkbk20","country_code":"FR","type":"education","lineage":["https://openalex.org/I21491767"]},{"id":"https://openalex.org/I4210114274","display_name":"Laboratoire d\u2019Informatique et Syst\u00e8mes","ror":"https://ror.org/0257sgk90","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I143002897","https://openalex.org/I21491767","https://openalex.org/I4210114274"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Pierre Siegel","raw_affiliation_strings":["Aix Marseille Univ., CNRS, LIS, Marseille, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Aix Marseille Univ., CNRS, LIS, Marseille, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I21491767","https://openalex.org/I4210114274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028939653","display_name":"Andrei Doncescu","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I190497903","display_name":"Laboratoire d'Analyse et d'Architecture des Syst\u00e8mes","ror":"https://ror.org/03vcm6439","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I190497903","https://openalex.org/I193033237","https://openalex.org/I196454796","https://openalex.org/I205747304","https://openalex.org/I4210095849","https://openalex.org/I4210152422","https://openalex.org/I4210159245","https://openalex.org/I4405258862","https://openalex.org/I4405259414"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Andrei Doncescu","raw_affiliation_strings":["CNRS, LAAS, French West Indies University-LAMIA, Universit\u00e9 de Toulouse, Toulouse, France","CNRS, LAAS, French West Indies University-LAMIA, Universit\u00e9 de Toulouse, 7 Avenue du Colonel Roche, 31400, Toulouse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CNRS, LAAS, French West Indies University-LAMIA, Universit\u00e9 de Toulouse, Toulouse, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I17866349","https://openalex.org/I190497903"]},{"raw_affiliation_string":"CNRS, LAAS, French West Indies University-LAMIA, Universit\u00e9 de Toulouse, 7 Avenue du Colonel Roche, 31400, Toulouse, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I17866349","https://openalex.org/I190497903"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031237035","display_name":"Vincent Risch","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I21491767","display_name":"Aix-Marseille Universit\u00e9","ror":"https://ror.org/035xkbk20","country_code":"FR","type":"education","lineage":["https://openalex.org/I21491767"]},{"id":"https://openalex.org/I4210114274","display_name":"Laboratoire d\u2019Informatique et Syst\u00e8mes","ror":"https://ror.org/0257sgk90","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I143002897","https://openalex.org/I21491767","https://openalex.org/I4210114274"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Vincent Risch","raw_affiliation_strings":["Aix Marseille Univ., CNRS, LIS, Marseille, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Aix Marseille Univ., CNRS, LIS, Marseille, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I21491767","https://openalex.org/I4210114274"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033106602","display_name":"Sylvain Sen\u00e9","orcid":"https://orcid.org/0000-0001-9741-9622"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I21491767","display_name":"Aix-Marseille Universit\u00e9","ror":"https://ror.org/035xkbk20","country_code":"FR","type":"education","lineage":["https://openalex.org/I21491767"]},{"id":"https://openalex.org/I4210114274","display_name":"Laboratoire d\u2019Informatique et Syst\u00e8mes","ror":"https://ror.org/0257sgk90","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I143002897","https://openalex.org/I21491767","https://openalex.org/I4210114274"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Sylvain Sen\u00e9","raw_affiliation_strings":["Aix Marseille Univ., CNRS, LIS, Marseille, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Aix Marseille Univ., CNRS, LIS, Marseille, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I21491767","https://openalex.org/I4210114274"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5028939653","https://openalex.org/A5031237035","https://openalex.org/A5033106602","https://openalex.org/A5079940268"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I17866349","https://openalex.org/I190497903","https://openalex.org/I21491767","https://openalex.org/I4210114274"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":null,"fwci":0.0785,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.38525319,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"79","issue":"4","first_page":"4556","last_page":"4581"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11303","display_name":"Bayesian Modeling and Causal Inference","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11010","display_name":"Logic, Reasoning, and Knowledge","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7283208966255188},{"id":"https://openalex.org/keywords/propositional-calculus","display_name":"Propositional calculus","score":0.6218277812004089},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5891116857528687},{"id":"https://openalex.org/keywords/monotonic-function","display_name":"Monotonic function","score":0.5421397089958191},{"id":"https://openalex.org/keywords/modal-logic","display_name":"Modal logic","score":0.5263294577598572},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.49348175525665283},{"id":"https://openalex.org/keywords/boolean-data-type","display_name":"Boolean data type","score":0.49235594272613525},{"id":"https://openalex.org/keywords/boolean-expression","display_name":"Boolean expression","score":0.44453534483909607},{"id":"https://openalex.org/keywords/modal","display_name":"Modal","score":0.4320961534976959},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4300830662250519},{"id":"https://openalex.org/keywords/limit","display_name":"Limit (mathematics)","score":0.4250786602497101},{"id":"https://openalex.org/keywords/boolean-network","display_name":"Boolean network","score":0.4140029549598694},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.35490718483924866},{"id":"https://openalex.org/keywords/boolean-function","display_name":"Boolean function","score":0.3350962698459625},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.20403754711151123}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7283208966255188},{"id":"https://openalex.org/C69562738","wikidata":"https://www.wikidata.org/wiki/Q200694","display_name":"Propositional calculus","level":2,"score":0.6218277812004089},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5891116857528687},{"id":"https://openalex.org/C72169020","wikidata":"https://www.wikidata.org/wiki/Q194404","display_name":"Monotonic function","level":2,"score":0.5421397089958191},{"id":"https://openalex.org/C27508121","wikidata":"https://www.wikidata.org/wiki/Q210841","display_name":"Modal logic","level":3,"score":0.5263294577598572},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.49348175525665283},{"id":"https://openalex.org/C7342684","wikidata":"https://www.wikidata.org/wiki/Q520777","display_name":"Boolean data type","level":2,"score":0.49235594272613525},{"id":"https://openalex.org/C158465420","wikidata":"https://www.wikidata.org/wiki/Q1979515","display_name":"Boolean expression","level":3,"score":0.44453534483909607},{"id":"https://openalex.org/C71139939","wikidata":"https://www.wikidata.org/wiki/Q910194","display_name":"Modal","level":2,"score":0.4320961534976959},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4300830662250519},{"id":"https://openalex.org/C151201525","wikidata":"https://www.wikidata.org/wiki/Q177239","display_name":"Limit (mathematics)","level":2,"score":0.4250786602497101},{"id":"https://openalex.org/C134444547","wikidata":"https://www.wikidata.org/wiki/Q585230","display_name":"Boolean network","level":3,"score":0.4140029549598694},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.35490718483924866},{"id":"https://openalex.org/C187455244","wikidata":"https://www.wikidata.org/wiki/Q942353","display_name":"Boolean function","level":2,"score":0.3350962698459625},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.20403754711151123},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C188027245","wikidata":"https://www.wikidata.org/wiki/Q750446","display_name":"Polymer chemistry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/s11227-022-04809-5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11227-022-04809-5","pdf_url":null,"source":{"id":"https://openalex.org/S32326811","display_name":"The Journal of Supercomputing","issn_l":"0920-8542","issn":["0920-8542","1573-0484"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of Supercomputing","raw_type":"journal-article"},{"id":"pmh:oai:HAL:hal-04022466v1","is_oa":true,"landing_page_url":"https://hal.science/hal-04022466","pdf_url":"https://hal.science/hal-04022466/document","source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Supercomputing, 2023, 79 (4), pp.4556-4581. &#x27E8;10.1007/s11227-022-04809-5&#x27E9;","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"pmh:oai:HAL:hal-04022466v1","is_oa":true,"landing_page_url":"https://hal.science/hal-04022466","pdf_url":"https://hal.science/hal-04022466/document","source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Supercomputing, 2023, 79 (4), pp.4556-4581. &#x27E8;10.1007/s11227-022-04809-5&#x27E9;","raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4656594441","display_name":null,"funder_award_id":"ANR18","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G7497337252","display_name":"Foundations of (Boolean) automata networks","funder_award_id":"ANR-18-CE40-0002","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320322892","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4297473636.pdf"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W344332445","https://openalex.org/W1532911465","https://openalex.org/W1560971821","https://openalex.org/W1889248400","https://openalex.org/W1980538968","https://openalex.org/W1980710953","https://openalex.org/W1990139847","https://openalex.org/W1994193122","https://openalex.org/W2001026694","https://openalex.org/W2002960642","https://openalex.org/W2018885902","https://openalex.org/W2023155449","https://openalex.org/W2036895604","https://openalex.org/W2046538693","https://openalex.org/W2053961182","https://openalex.org/W2062109421","https://openalex.org/W2065546165","https://openalex.org/W2075277371","https://openalex.org/W2100078804","https://openalex.org/W2104130992","https://openalex.org/W2111123076","https://openalex.org/W2130721915","https://openalex.org/W2136559804","https://openalex.org/W2139917278","https://openalex.org/W2146958277","https://openalex.org/W2147013823","https://openalex.org/W2155322595","https://openalex.org/W2159130719","https://openalex.org/W2751830479","https://openalex.org/W2887632752","https://openalex.org/W2922621913","https://openalex.org/W2997476337","https://openalex.org/W3012124203","https://openalex.org/W4251606455"],"related_works":["https://openalex.org/W4243221174","https://openalex.org/W4315471767","https://openalex.org/W4252281389","https://openalex.org/W2613742296","https://openalex.org/W3141532631","https://openalex.org/W2131164334","https://openalex.org/W2166214692","https://openalex.org/W2061676498","https://openalex.org/W2016079766","https://openalex.org/W2061512596"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2026-08-08T01:25:22.217667","created_date":"2025-10-10T00:00:00"}
