{"id":"https://openalex.org/W4226176616","doi":"https://doi.org/10.1007/s11227-022-04449-9","title":"Supercomputing of reducing sequenced bases in de novo sequencing of the human genome","display_name":"Supercomputing of reducing sequenced bases in de novo sequencing of the human genome","publication_year":2022,"publication_date":"2022-04-08","ids":{"openalex":"https://openalex.org/W4226176616","doi":"https://doi.org/10.1007/s11227-022-04449-9"},"language":"en","primary_location":{"id":"doi:10.1007/s11227-022-04449-9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11227-022-04449-9","pdf_url":null,"source":{"id":"https://openalex.org/S32326811","display_name":"The Journal of Supercomputing","issn_l":"0920-8542","issn":["0920-8542","1573-0484"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of Supercomputing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029134937","display_name":"Shirin Kavezadeh","orcid":null},"institutions":[{"id":"https://openalex.org/I39268498","display_name":"University of Isfahan","ror":"https://ror.org/05h9t7759","country_code":"IR","type":"education","lineage":["https://openalex.org/I39268498"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Shirin Kavezadeh","raw_affiliation_strings":["Department of Electrical Engineering, University of Isfahan, Isfahan, Iran"],"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering, University of Isfahan, Isfahan, Iran","institution_ids":["https://openalex.org/I39268498"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033263159","display_name":"Ashkan Farazin","orcid":"https://orcid.org/0000-0003-4371-2799"},"institutions":[{"id":"https://openalex.org/I105818395","display_name":"University of Kashan","ror":"https://ror.org/015zmr509","country_code":"IR","type":"education","lineage":["https://openalex.org/I105818395"]}],"countries":["IR"],"is_corresponding":true,"raw_author_name":"Ashkan Farazin","raw_affiliation_strings":["Department of Solid Mechanics, Faculty of Mechanical Engineering, University of Kashan, Kashan, P.O. Box 87317-53153, Iran"],"affiliations":[{"raw_affiliation_string":"Department of Solid Mechanics, Faculty of Mechanical Engineering, University of Kashan, Kashan, P.O. Box 87317-53153, Iran","institution_ids":["https://openalex.org/I105818395"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062804113","display_name":"Alireza Hosseinzadeh","orcid":"https://orcid.org/0000-0001-9172-1169"},"institutions":[{"id":"https://openalex.org/I151746483","display_name":"University of Waterloo","ror":"https://ror.org/01aff2v68","country_code":"CA","type":"education","lineage":["https://openalex.org/I151746483"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Alireza Hosseinzadeh","raw_affiliation_strings":["Department of Electrical and Computer Engineering, University of Waterloo, Waterloo, ON, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Waterloo, Waterloo, ON, Canada","institution_ids":["https://openalex.org/I151746483"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5033263159"],"corresponding_institution_ids":["https://openalex.org/I105818395"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":null,"fwci":0.6896,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.74279479,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"78","issue":"13","first_page":"14769","last_page":"14793"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/contig","display_name":"Contig","score":0.888634204864502},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.7994667887687683},{"id":"https://openalex.org/keywords/hybrid-genome-assembly","display_name":"Hybrid genome assembly","score":0.7723199129104614},{"id":"https://openalex.org/keywords/sequence-assembly","display_name":"Sequence assembly","score":0.6404926776885986},{"id":"https://openalex.org/keywords/reference-genome","display_name":"Reference genome","score":0.6038036346435547},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.557624876499176},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.5556702017784119},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.5423082709312439},{"id":"https://openalex.org/keywords/cancer-genome-sequencing","display_name":"Cancer genome sequencing","score":0.4517754912376404},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.44646501541137695},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3837326467037201},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.27611374855041504},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2380085587501526}],"concepts":[{"id":"https://openalex.org/C59582021","wikidata":"https://www.wikidata.org/wiki/Q1128751","display_name":"Contig","level":4,"score":0.888634204864502},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.7994667887687683},{"id":"https://openalex.org/C113425843","wikidata":"https://www.wikidata.org/wiki/Q5953213","display_name":"Hybrid genome assembly","level":5,"score":0.7723199129104614},{"id":"https://openalex.org/C18949551","wikidata":"https://www.wikidata.org/wiki/Q740578","display_name":"Sequence assembly","level":5,"score":0.6404926776885986},{"id":"https://openalex.org/C192953774","wikidata":"https://www.wikidata.org/wiki/Q7307127","display_name":"Reference genome","level":4,"score":0.6038036346435547},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.557624876499176},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.5556702017784119},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.5423082709312439},{"id":"https://openalex.org/C205270622","wikidata":"https://www.wikidata.org/wiki/Q17082639","display_name":"Cancer genome sequencing","level":5,"score":0.4517754912376404},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.44646501541137695},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3837326467037201},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.27611374855041504},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2380085587501526},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s11227-022-04449-9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11227-022-04449-9","pdf_url":null,"source":{"id":"https://openalex.org/S32326811","display_name":"The Journal of Supercomputing","issn_l":"0920-8542","issn":["0920-8542","1573-0484"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of Supercomputing","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W1965186855","https://openalex.org/W1976230668","https://openalex.org/W1983403167","https://openalex.org/W1992718502","https://openalex.org/W2020095435","https://openalex.org/W2036083035","https://openalex.org/W2084821192","https://openalex.org/W2086921425","https://openalex.org/W2088502592","https://openalex.org/W2124465358","https://openalex.org/W2144268209","https://openalex.org/W2144594443","https://openalex.org/W2149066274","https://openalex.org/W2312380190","https://openalex.org/W2397469828","https://openalex.org/W2513701931","https://openalex.org/W2561954922","https://openalex.org/W2790788127","https://openalex.org/W2898961164","https://openalex.org/W2951390915","https://openalex.org/W3015365194","https://openalex.org/W3090989588","https://openalex.org/W3099661149","https://openalex.org/W3122689948","https://openalex.org/W3123466143","https://openalex.org/W3124803510","https://openalex.org/W3125174378","https://openalex.org/W3126518607","https://openalex.org/W3138529321","https://openalex.org/W3180695057","https://openalex.org/W3182744992","https://openalex.org/W3185165435","https://openalex.org/W3186643077","https://openalex.org/W3207369992"],"related_works":["https://openalex.org/W2127651281","https://openalex.org/W3167837387","https://openalex.org/W2993223466","https://openalex.org/W2949198880","https://openalex.org/W2944010518","https://openalex.org/W2157888653","https://openalex.org/W2131813051","https://openalex.org/W54719527","https://openalex.org/W2613464961","https://openalex.org/W2089480001"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
