{"id":"https://openalex.org/W2085637888","doi":"https://doi.org/10.1007/s11227-010-0390-6","title":"DEEP\u2014differential evolution entirely parallel method for gene regulatory networks","display_name":"DEEP\u2014differential evolution entirely parallel method for gene regulatory networks","publication_year":2010,"publication_date":"2010-02-10","ids":{"openalex":"https://openalex.org/W2085637888","doi":"https://doi.org/10.1007/s11227-010-0390-6","mag":"2085637888","pmid":"https://pubmed.ncbi.nlm.nih.gov/22223930"},"language":"en","primary_location":{"id":"doi:10.1007/s11227-010-0390-6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11227-010-0390-6","pdf_url":null,"source":{"id":"https://openalex.org/S32326811","display_name":"The Journal of Supercomputing","issn_l":"0920-8542","issn":["0920-8542","1573-0484"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of Supercomputing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047959526","display_name":"Konstantin Kozlov","orcid":"https://orcid.org/0000-0001-6765-236X"},"institutions":[{"id":"https://openalex.org/I212220629","display_name":"Peter the Great St. Petersburg Polytechnic University","ror":"https://ror.org/02x91aj62","country_code":"RU","type":"education","lineage":["https://openalex.org/I212220629"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Konstantin Kozlov","raw_affiliation_strings":["Department of Computational Biology, State Polytechnical University, St. Petersburg, 195251, Russia,  kozlov@spbcas.ru","Dept. of computational biology, State Polytechnical University, St.Petersburg, Russia 195251#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Computational Biology, State Polytechnical University, St. Petersburg, 195251, Russia,  kozlov@spbcas.ru","institution_ids":[]},{"raw_affiliation_string":"Dept. of computational biology, State Polytechnical University, St.Petersburg, Russia 195251#TAB#","institution_ids":["https://openalex.org/I212220629"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055859283","display_name":"A. M. Samsonov","orcid":"https://orcid.org/0000-0002-2856-6239"},"institutions":[{"id":"https://openalex.org/I1313323035","display_name":"Russian Academy of Sciences","ror":"https://ror.org/05qrfxd25","country_code":"RU","type":"funder","lineage":["https://openalex.org/I1313323035"]},{"id":"https://openalex.org/I95568926","display_name":"Ioffe Institute","ror":"https://ror.org/05dkdaa55","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210096333","https://openalex.org/I95568926"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Alexander Samsonov","raw_affiliation_strings":["The A.F. Ioffe Physical Technical Institute of the Russian Academy of Sciences, St. Petersburg, 194021, Russia","The A.F. Ioffe Physical Technical Institute of the Russian Academy of Sciences, St. Petersburg, Russia 194021#TAB#"],"affiliations":[{"raw_affiliation_string":"The A.F. Ioffe Physical Technical Institute of the Russian Academy of Sciences, St. Petersburg, 194021, Russia","institution_ids":["https://openalex.org/I95568926"]},{"raw_affiliation_string":"The A.F. Ioffe Physical Technical Institute of the Russian Academy of Sciences, St. Petersburg, Russia 194021#TAB#","institution_ids":["https://openalex.org/I1313323035"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5047959526"],"corresponding_institution_ids":["https://openalex.org/I212220629"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":null,"fwci":0.5398,"has_fulltext":false,"cited_by_count":30,"citation_normalized_percentile":{"value":0.66453976,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"57","issue":"2","first_page":"172","last_page":"178"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9725000262260437,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.848889946937561},{"id":"https://openalex.org/keywords/ring-network","display_name":"Ring network","score":0.7031379342079163},{"id":"https://openalex.org/keywords/convergence","display_name":"Convergence (economics)","score":0.6529574990272522},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5698248147964478},{"id":"https://openalex.org/keywords/differential-evolution","display_name":"Differential evolution","score":0.5367352366447449},{"id":"https://openalex.org/keywords/differential","display_name":"Differential (mechanical device)","score":0.49107933044433594},{"id":"https://openalex.org/keywords/nonlinear-system","display_name":"Nonlinear system","score":0.48781803250312805},{"id":"https://openalex.org/keywords/scheme","display_name":"Scheme (mathematics)","score":0.48710155487060547},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.47472724318504333},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.43952369689941406},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.35630449652671814},{"id":"https://openalex.org/keywords/network-topology","display_name":"Network topology","score":0.3510842025279999},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12545806169509888},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.12234735488891602},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.08096390962600708}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.848889946937561},{"id":"https://openalex.org/C122306262","wikidata":"https://www.wikidata.org/wiki/Q719775","display_name":"Ring network","level":3,"score":0.7031379342079163},{"id":"https://openalex.org/C2777303404","wikidata":"https://www.wikidata.org/wiki/Q759757","display_name":"Convergence (economics)","level":2,"score":0.6529574990272522},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5698248147964478},{"id":"https://openalex.org/C74750220","wikidata":"https://www.wikidata.org/wiki/Q2662197","display_name":"Differential evolution","level":2,"score":0.5367352366447449},{"id":"https://openalex.org/C93226319","wikidata":"https://www.wikidata.org/wiki/Q193137","display_name":"Differential (mechanical device)","level":2,"score":0.49107933044433594},{"id":"https://openalex.org/C158622935","wikidata":"https://www.wikidata.org/wiki/Q660848","display_name":"Nonlinear system","level":2,"score":0.48781803250312805},{"id":"https://openalex.org/C77618280","wikidata":"https://www.wikidata.org/wiki/Q1155772","display_name":"Scheme (mathematics)","level":2,"score":0.48710155487060547},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.47472724318504333},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.43952369689941406},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.35630449652671814},{"id":"https://openalex.org/C199845137","wikidata":"https://www.wikidata.org/wiki/Q145490","display_name":"Network topology","level":2,"score":0.3510842025279999},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12545806169509888},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.12234735488891602},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.08096390962600708},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C146978453","wikidata":"https://www.wikidata.org/wiki/Q3798668","display_name":"Aerospace engineering","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C50522688","wikidata":"https://www.wikidata.org/wiki/Q189833","display_name":"Economic growth","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/s11227-010-0390-6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11227-010-0390-6","pdf_url":null,"source":{"id":"https://openalex.org/S32326811","display_name":"The Journal of Supercomputing","issn_l":"0920-8542","issn":["0920-8542","1573-0484"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of Supercomputing","raw_type":"journal-article"},{"id":"pmid:22223930","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22223930","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of supercomputing","raw_type":null},{"id":"pmh:oai:europepmc.org:2259109","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3250518","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.6399999856948853}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":10,"referenced_works":["https://openalex.org/W19078162","https://openalex.org/W1595159159","https://openalex.org/W1923378012","https://openalex.org/W1991138583","https://openalex.org/W1992901075","https://openalex.org/W2010586622","https://openalex.org/W2028582548","https://openalex.org/W2135105208","https://openalex.org/W2154349682","https://openalex.org/W4232082136"],"related_works":["https://openalex.org/W2086397253","https://openalex.org/W2133122801","https://openalex.org/W600422426","https://openalex.org/W2007156430","https://openalex.org/W2119195077","https://openalex.org/W2059056439","https://openalex.org/W1969002200","https://openalex.org/W2328043257","https://openalex.org/W4385451359","https://openalex.org/W2004189604"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}