{"id":"https://openalex.org/W1976720171","doi":"https://doi.org/10.1007/s11227-007-0121-9","title":"Efficient search algorithms for RNAi target detection","display_name":"Efficient search algorithms for RNAi target detection","publication_year":2007,"publication_date":"2007-04-06","ids":{"openalex":"https://openalex.org/W1976720171","doi":"https://doi.org/10.1007/s11227-007-0121-9","mag":"1976720171"},"language":"en","primary_location":{"id":"doi:10.1007/s11227-007-0121-9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11227-007-0121-9","pdf_url":null,"source":{"id":"https://openalex.org/S32326811","display_name":"The Journal of Supercomputing","issn_l":"0920-8542","issn":["0920-8542","1573-0484"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of Supercomputing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031840171","display_name":"Shibin Qiu","orcid":null},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Shibin Qiu","raw_affiliation_strings":["Department of Computer Science, University of New Mexico, Albuquerque, NM, 87131, USA","Department of Computer Science, University of New Mexico, Albuquerque, USA 87131"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of New Mexico, Albuquerque, NM, 87131, USA","institution_ids":["https://openalex.org/I169521973"]},{"raw_affiliation_string":"Department of Computer Science, University of New Mexico, Albuquerque, USA 87131","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020376623","display_name":"Terran Lane","orcid":null},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Terran Lane","raw_affiliation_strings":["Department of Computer Science, University of New Mexico, Albuquerque, NM, 87131, USA","Department of Computer Science, University of New Mexico, Albuquerque, USA 87131"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of New Mexico, Albuquerque, NM, 87131, USA","institution_ids":["https://openalex.org/I169521973"]},{"raw_affiliation_string":"Department of Computer Science, University of New Mexico, Albuquerque, USA 87131","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040297827","display_name":"Cundong Yang","orcid":null},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cundong Yang","raw_affiliation_strings":["Department of Electrical and Computer Engineering, University of New Mexico, Albuquerque, USA","Department of Electrical and Computer Engineering, University of New-Mexico, Albuquerque, USA"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of New Mexico, Albuquerque, USA","institution_ids":["https://openalex.org/I169521973"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of New-Mexico, Albuquerque, USA","institution_ids":["https://openalex.org/I169521973"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5031840171"],"corresponding_institution_ids":["https://openalex.org/I169521973"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.07534123,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"42","issue":"3","first_page":"303","last_page":"319"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10725","display_name":"RNA Interference and Gene Delivery","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10725","display_name":"RNA Interference and Gene Delivery","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rna-interference","display_name":"RNA interference","score":0.8387366533279419},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7160944938659668},{"id":"https://openalex.org/keywords/interference","display_name":"Interference (communication)","score":0.5495074391365051},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5103709101676941},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.5011637210845947},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.45664048194885254},{"id":"https://openalex.org/keywords/gene-silencing","display_name":"Gene silencing","score":0.4288385212421417},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4223896861076355},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.37475448846817017},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.338083952665329},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.22617468237876892},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.08559772372245789},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.06644859910011292}],"concepts":[{"id":"https://openalex.org/C166703698","wikidata":"https://www.wikidata.org/wiki/Q201993","display_name":"RNA interference","level":4,"score":0.8387366533279419},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7160944938659668},{"id":"https://openalex.org/C32022120","wikidata":"https://www.wikidata.org/wiki/Q797225","display_name":"Interference (communication)","level":3,"score":0.5495074391365051},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5103709101676941},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.5011637210845947},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.45664048194885254},{"id":"https://openalex.org/C119056186","wikidata":"https://www.wikidata.org/wiki/Q1431332","display_name":"Gene silencing","level":3,"score":0.4288385212421417},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4223896861076355},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.37475448846817017},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.338083952665329},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.22617468237876892},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.08559772372245789},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.06644859910011292},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C127162648","wikidata":"https://www.wikidata.org/wiki/Q16858953","display_name":"Channel (broadcasting)","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s11227-007-0121-9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11227-007-0121-9","pdf_url":null,"source":{"id":"https://openalex.org/S32326811","display_name":"The Journal of Supercomputing","issn_l":"0920-8542","issn":["0920-8542","1573-0484"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of Supercomputing","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1537417465","https://openalex.org/W1600482701","https://openalex.org/W1647075334","https://openalex.org/W1771592512","https://openalex.org/W1967517087","https://openalex.org/W1971437334","https://openalex.org/W1982944995","https://openalex.org/W1985108724","https://openalex.org/W1993233092","https://openalex.org/W2017642141","https://openalex.org/W2020816856","https://openalex.org/W2055043387","https://openalex.org/W2071596792","https://openalex.org/W2074231493","https://openalex.org/W2087064593","https://openalex.org/W2089117520","https://openalex.org/W2095674416","https://openalex.org/W2099684647","https://openalex.org/W2101429492","https://openalex.org/W2116899346","https://openalex.org/W2124519945","https://openalex.org/W2126444562","https://openalex.org/W2127211454","https://openalex.org/W2128212057","https://openalex.org/W2130067665","https://openalex.org/W2145638174","https://openalex.org/W2148603752","https://openalex.org/W2149221950","https://openalex.org/W2152434298","https://openalex.org/W2163199119","https://openalex.org/W2171695627","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2387630553","https://openalex.org/W1572871015","https://openalex.org/W2979508935","https://openalex.org/W2952117239","https://openalex.org/W2270468432","https://openalex.org/W819328480","https://openalex.org/W2163149544","https://openalex.org/W3143562902","https://openalex.org/W2171008594","https://openalex.org/W2411136628"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
