{"id":"https://openalex.org/W4225316861","doi":"https://doi.org/10.1007/s11192-022-04381-y","title":"A refinement strategy for identification of scientific software from bioinformatics publications","display_name":"A refinement strategy for identification of scientific software from bioinformatics publications","publication_year":2022,"publication_date":"2022-05-03","ids":{"openalex":"https://openalex.org/W4225316861","doi":"https://doi.org/10.1007/s11192-022-04381-y"},"language":"en","primary_location":{"id":"doi:10.1007/s11192-022-04381-y","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11192-022-04381-y","pdf_url":null,"source":{"id":"https://openalex.org/S148561398","display_name":"Scientometrics","issn_l":"0138-9130","issn":["0138-9130","1588-2861"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320108","host_organization_name":"Springer Nature (Netherlands)","host_organization_lineage":["https://openalex.org/P4310320108","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature (Netherlands)","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientometrics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084331058","display_name":"Lu Jiang","orcid":null},"institutions":[{"id":"https://openalex.org/I119454577","display_name":"Nanjing Agricultural University","ror":"https://ror.org/05td3s095","country_code":"CN","type":"education","lineage":["https://openalex.org/I119454577"]},{"id":"https://openalex.org/I4210134970","display_name":"Wuhan Branch of the National Science Library","ror":"https://ror.org/046n0zq43","country_code":"CN","type":"archive","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134970","https://openalex.org/I4210148850"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lu Jiang","raw_affiliation_strings":["College of Information Management, Nanjing Agricultural University, Nanjing, China","Scientometrics & Evaluation Research Center (SERC), Chengdu Library and Information Center of Chinese Academy of Sciences, Chengdu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Information Management, Nanjing Agricultural University, Nanjing, China","institution_ids":["https://openalex.org/I119454577"]},{"raw_affiliation_string":"Scientometrics & Evaluation Research Center (SERC), Chengdu Library and Information Center of Chinese Academy of Sciences, Chengdu, China","institution_ids":["https://openalex.org/I4210134970"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001303194","display_name":"Xinyu Kang","orcid":"https://orcid.org/0000-0003-1640-6198"},"institutions":[{"id":"https://openalex.org/I31595395","display_name":"Chengdu University of Technology","ror":"https://ror.org/05pejbw21","country_code":"CN","type":"education","lineage":["https://openalex.org/I31595395"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xinyu Kang","raw_affiliation_strings":["College of Management Science, Chengdu University of Technology, Chengdu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Management Science, Chengdu University of Technology, Chengdu, China","institution_ids":["https://openalex.org/I31595395"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100743822","display_name":"Shan Huang","orcid":"https://orcid.org/0009-0008-3736-8163"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shan Huang","raw_affiliation_strings":["School of Information Management, Sun Yat-Sen University, Guangzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Management, Sun Yat-Sen University, Guangzhou, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5112804779","display_name":"Bo Yang","orcid":"https://orcid.org/0000-0003-1903-6292"},"institutions":[{"id":"https://openalex.org/I119454577","display_name":"Nanjing Agricultural University","ror":"https://ror.org/05td3s095","country_code":"CN","type":"education","lineage":["https://openalex.org/I119454577"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bo Yang","raw_affiliation_strings":["College of Information Management, Nanjing Agricultural University, Nanjing, China","Research Center for Humanities and Social Computing, Nanjing Agricultural University, Nanjing, China"],"raw_orcid":"https://orcid.org/0000-0003-1903-6292","affiliations":[{"raw_affiliation_string":"College of Information Management, Nanjing Agricultural University, Nanjing, China","institution_ids":["https://openalex.org/I119454577"]},{"raw_affiliation_string":"Research Center for Humanities and Social Computing, Nanjing Agricultural University, Nanjing, China","institution_ids":["https://openalex.org/I119454577"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5084331058"],"corresponding_institution_ids":["https://openalex.org/I119454577","https://openalex.org/I4210134970"],"apc_list":{"value":2290,"currency":"EUR","value_usd":2890},"apc_paid":null,"fwci":0.6381,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.72360927,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"127","issue":"6","first_page":"3293","last_page":"3316"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10260","display_name":"Software Engineering Research","score":0.982699990272522,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10260","display_name":"Software Engineering Research","score":0.982699990272522,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9800999760627747,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9531999826431274,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7759768962860107},{"id":"https://openalex.org/keywords/bootstrapping","display_name":"Bootstrapping (finance)","score":0.7176975607872009},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.7001985907554626},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6451552510261536},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5416138768196106},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.42205631732940674},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.37698569893836975},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3559025526046753},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11819478869438171},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07829752564430237}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7759768962860107},{"id":"https://openalex.org/C207609745","wikidata":"https://www.wikidata.org/wiki/Q4944086","display_name":"Bootstrapping (finance)","level":2,"score":0.7176975607872009},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.7001985907554626},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6451552510261536},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5416138768196106},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.42205631732940674},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.37698569893836975},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3559025526046753},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11819478869438171},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07829752564430237},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C106159729","wikidata":"https://www.wikidata.org/wiki/Q2294553","display_name":"Financial economics","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/s11192-022-04381-y","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11192-022-04381-y","pdf_url":null,"source":{"id":"https://openalex.org/S148561398","display_name":"Scientometrics","issn_l":"0138-9130","issn":["0138-9130","1588-2861"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320108","host_organization_name":"Springer Nature (Netherlands)","host_organization_lineage":["https://openalex.org/P4310320108","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature (Netherlands)","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientometrics","raw_type":"journal-article"},{"id":"pmh:oai:RePEc:spr:scient:v:127:y:2022:i:6:d:10.1007_s11192-022-04381-y","is_oa":false,"landing_page_url":"http://link.springer.com/10.1007/s11192-022-04381-y","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Quality Education","score":0.5,"id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G4437680932","display_name":null,"funder_award_id":"18BTQ077","funder_id":"https://openalex.org/F4320327557","funder_display_name":"National Office for Philosophy and Social Sciences"}],"funders":[{"id":"https://openalex.org/F4320327557","display_name":"National Office for Philosophy and Social Sciences","ror":"https://ror.org/04m0ms912"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":70,"referenced_works":["https://openalex.org/W179875071","https://openalex.org/W1439900778","https://openalex.org/W1572136682","https://openalex.org/W1622429627","https://openalex.org/W1968612609","https://openalex.org/W1982165141","https://openalex.org/W1996430422","https://openalex.org/W2000363133","https://openalex.org/W2028738040","https://openalex.org/W2054628911","https://openalex.org/W2056265070","https://openalex.org/W2064199746","https://openalex.org/W2069143585","https://openalex.org/W2081930221","https://openalex.org/W2117772341","https://openalex.org/W2123671373","https://openalex.org/W2153461795","https://openalex.org/W2153921000","https://openalex.org/W2271967220","https://openalex.org/W2278163684","https://openalex.org/W2296283641","https://openalex.org/W2466877391","https://openalex.org/W2527181616","https://openalex.org/W2545122641","https://openalex.org/W2559281960","https://openalex.org/W2561742423","https://openalex.org/W2613831280","https://openalex.org/W2626176522","https://openalex.org/W2758302892","https://openalex.org/W2769387903","https://openalex.org/W2798839675","https://openalex.org/W2803370961","https://openalex.org/W2806624439","https://openalex.org/W2807800730","https://openalex.org/W2807938752","https://openalex.org/W2810986024","https://openalex.org/W2892525833","https://openalex.org/W2901218091","https://openalex.org/W2901303390","https://openalex.org/W2902404751","https://openalex.org/W2907825321","https://openalex.org/W2911871734","https://openalex.org/W2912662376","https://openalex.org/W2925268209","https://openalex.org/W2945642707","https://openalex.org/W2951934944","https://openalex.org/W2964045374","https://openalex.org/W2964263551","https://openalex.org/W2972084801","https://openalex.org/W2987972786","https://openalex.org/W3004047707","https://openalex.org/W3027546307","https://openalex.org/W3029981012","https://openalex.org/W3034750607","https://openalex.org/W3092756305","https://openalex.org/W3095038380","https://openalex.org/W3096378489","https://openalex.org/W3102943483","https://openalex.org/W3104462817","https://openalex.org/W3117414429","https://openalex.org/W3123005344","https://openalex.org/W3136657289","https://openalex.org/W3179665030","https://openalex.org/W3206392287","https://openalex.org/W4239593161","https://openalex.org/W4302978247","https://openalex.org/W6683738474","https://openalex.org/W6720328421","https://openalex.org/W6762044158","https://openalex.org/W6990502722"],"related_works":["https://openalex.org/W1534274833","https://openalex.org/W3117246195","https://openalex.org/W2081850291","https://openalex.org/W156620619","https://openalex.org/W2914363205","https://openalex.org/W1598221548","https://openalex.org/W1963695443","https://openalex.org/W2997844990","https://openalex.org/W2616249226","https://openalex.org/W3121940562"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
