{"id":"https://openalex.org/W4292712241","doi":"https://doi.org/10.1007/s11047-022-09916-z","title":"A self-adaptive evolutionary algorithm using Monte Carlo Fragment insertion and conformation clustering for the protein structure prediction problem","display_name":"A self-adaptive evolutionary algorithm using Monte Carlo Fragment insertion and conformation clustering for the protein structure prediction problem","publication_year":2022,"publication_date":"2022-08-11","ids":{"openalex":"https://openalex.org/W4292712241","doi":"https://doi.org/10.1007/s11047-022-09916-z"},"language":"en","primary_location":{"id":"doi:10.1007/s11047-022-09916-z","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11047-022-09916-z","pdf_url":null,"source":{"id":"https://openalex.org/S149828480","display_name":"Natural Computing","issn_l":"1567-7818","issn":["1567-7818","1572-9796"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Natural Computing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://repositorio.udesc.br/handle/UDESC/3277","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071906708","display_name":"Rafael Stubs Parpinelli","orcid":"https://orcid.org/0000-0001-7326-5032"},"institutions":[{"id":"https://openalex.org/I164790352","display_name":"Universidade do Estado de Santa Catarina","ror":"https://ror.org/03ztsbk67","country_code":"BR","type":"education","lineage":["https://openalex.org/I164790352"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Rafael Stubs Parpinelli","raw_affiliation_strings":["Graduate Program in Applied Computing, State University of Santa Catarina, Joinville, Brazil"],"raw_orcid":"https://orcid.org/0000-0001-7326-5032","affiliations":[{"raw_affiliation_string":"Graduate Program in Applied Computing, State University of Santa Catarina, Joinville, Brazil","institution_ids":["https://openalex.org/I164790352"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003441037","display_name":"Nilcimar Neitzel Will","orcid":null},"institutions":[{"id":"https://openalex.org/I164790352","display_name":"Universidade do Estado de Santa Catarina","ror":"https://ror.org/03ztsbk67","country_code":"BR","type":"education","lineage":["https://openalex.org/I164790352"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Nilcimar Neitzel Will","raw_affiliation_strings":["Graduate Program in Applied Computing, State University of Santa Catarina, Joinville, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate Program in Applied Computing, State University of Santa Catarina, Joinville, Brazil","institution_ids":["https://openalex.org/I164790352"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078143106","display_name":"Renan Samuel da Silva","orcid":null},"institutions":[{"id":"https://openalex.org/I164790352","display_name":"Universidade do Estado de Santa Catarina","ror":"https://ror.org/03ztsbk67","country_code":"BR","type":"education","lineage":["https://openalex.org/I164790352"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Renan Samuel da Silva","raw_affiliation_strings":["Graduate Program in Applied Computing, State University of Santa Catarina, Joinville, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate Program in Applied Computing, State University of Santa Catarina, Joinville, Brazil","institution_ids":["https://openalex.org/I164790352"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5071906708"],"corresponding_institution_ids":["https://openalex.org/I164790352"],"apc_list":{"value":2290,"currency":"EUR","value_usd":2890},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.08346014,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"23","issue":"4","first_page":"687","last_page":"705"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6767884492874146},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.6726696491241455},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.6716827750205994},{"id":"https://openalex.org/keywords/fragment","display_name":"Fragment (logic)","score":0.6401535272598267},{"id":"https://openalex.org/keywords/monte-carlo-method","display_name":"Monte Carlo method","score":0.6178179979324341},{"id":"https://openalex.org/keywords/theory-of-computation","display_name":"Theory of computation","score":0.5366883277893066},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.49799036979675293},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.451465368270874},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4398307800292969},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.4394151568412781},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.43595218658447266},{"id":"https://openalex.org/keywords/evolutionary-algorithm","display_name":"Evolutionary algorithm","score":0.41547101736068726},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.3921583890914917},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3384082019329071},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1912814974784851},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.10695764422416687}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6767884492874146},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.6726696491241455},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.6716827750205994},{"id":"https://openalex.org/C2776235265","wikidata":"https://www.wikidata.org/wiki/Q18392052","display_name":"Fragment (logic)","level":2,"score":0.6401535272598267},{"id":"https://openalex.org/C19499675","wikidata":"https://www.wikidata.org/wiki/Q232207","display_name":"Monte Carlo method","level":2,"score":0.6178179979324341},{"id":"https://openalex.org/C24858836","wikidata":"https://www.wikidata.org/wiki/Q844718","display_name":"Theory of computation","level":2,"score":0.5366883277893066},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.49799036979675293},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.451465368270874},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4398307800292969},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.4394151568412781},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.43595218658447266},{"id":"https://openalex.org/C159149176","wikidata":"https://www.wikidata.org/wiki/Q14489129","display_name":"Evolutionary algorithm","level":2,"score":0.41547101736068726},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.3921583890914917},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3384082019329071},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1912814974784851},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.10695764422416687},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/s11047-022-09916-z","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11047-022-09916-z","pdf_url":null,"source":{"id":"https://openalex.org/S149828480","display_name":"Natural Computing","issn_l":"1567-7818","issn":["1567-7818","1572-9796"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Natural Computing","raw_type":"journal-article"},{"id":"pmh:oai:repositorio.udesc.br:UDESC/3277","is_oa":true,"landing_page_url":"https://repositorio.udesc.br/handle/UDESC/3277","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"instacron:UDESC","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"pmh:oai:repositorio.udesc.br:UDESC/3277","is_oa":true,"landing_page_url":"https://repositorio.udesc.br/handle/UDESC/3277","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"instacron:UDESC","raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":61,"referenced_works":["https://openalex.org/W618912524","https://openalex.org/W785937070","https://openalex.org/W1433532214","https://openalex.org/W1544672259","https://openalex.org/W1548178570","https://openalex.org/W1976759304","https://openalex.org/W1977194203","https://openalex.org/W1979591743","https://openalex.org/W2002098814","https://openalex.org/W2011989924","https://openalex.org/W2013785414","https://openalex.org/W2016423785","https://openalex.org/W2021027064","https://openalex.org/W2033650210","https://openalex.org/W2044145005","https://openalex.org/W2045777307","https://openalex.org/W2056882961","https://openalex.org/W2063916063","https://openalex.org/W2065967225","https://openalex.org/W2103325328","https://openalex.org/W2110483430","https://openalex.org/W2114115133","https://openalex.org/W2119898445","https://openalex.org/W2129724855","https://openalex.org/W2132262459","https://openalex.org/W2137340504","https://openalex.org/W2141920771","https://openalex.org/W2142529984","https://openalex.org/W2159427933","https://openalex.org/W2337606518","https://openalex.org/W2395023409","https://openalex.org/W2559617060","https://openalex.org/W2570756324","https://openalex.org/W2590345751","https://openalex.org/W2606439133","https://openalex.org/W2611927968","https://openalex.org/W2614367549","https://openalex.org/W2614573232","https://openalex.org/W2618467698","https://openalex.org/W2622769796","https://openalex.org/W2733554620","https://openalex.org/W2752506074","https://openalex.org/W2755096928","https://openalex.org/W2767332469","https://openalex.org/W2783924029","https://openalex.org/W2790616197","https://openalex.org/W2794590053","https://openalex.org/W2889594591","https://openalex.org/W2890824192","https://openalex.org/W2897294243","https://openalex.org/W2897772846","https://openalex.org/W2905233702","https://openalex.org/W2911078906","https://openalex.org/W2941002594","https://openalex.org/W2944489523","https://openalex.org/W2954588328","https://openalex.org/W3036840823","https://openalex.org/W3177828909","https://openalex.org/W3208999135","https://openalex.org/W4210958064","https://openalex.org/W4255933199"],"related_works":["https://openalex.org/W3022225908","https://openalex.org/W2574528486","https://openalex.org/W2946599741","https://openalex.org/W2593264178","https://openalex.org/W2043066834","https://openalex.org/W3171039768","https://openalex.org/W2136856901","https://openalex.org/W2368468053","https://openalex.org/W2058542300","https://openalex.org/W1564749278"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
