{"id":"https://openalex.org/W1996847161","doi":"https://doi.org/10.1007/s11047-004-2643-x","title":"Physical modeling of biomolecular computers: Models, limitations, and experimental validation","display_name":"Physical modeling of biomolecular computers: Models, limitations, and experimental validation","publication_year":2004,"publication_date":"2004-12-01","ids":{"openalex":"https://openalex.org/W1996847161","doi":"https://doi.org/10.1007/s11047-004-2643-x","mag":"1996847161"},"language":"en","primary_location":{"id":"doi:10.1007/s11047-004-2643-x","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11047-004-2643-x","pdf_url":null,"source":{"id":"https://openalex.org/S149828480","display_name":"Natural Computing","issn_l":"1567-7818","issn":["1567-7818","1572-9796"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Natural Computing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088074620","display_name":"John A. Rose","orcid":null},"institutions":[{"id":"https://openalex.org/I4210086780","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19","country_code":"JP","type":"government","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210086780"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"John A. Rose","raw_affiliation_strings":["Department of Computer Science, and UPBSB, The University of Tokyo, and Japan Science and Technology Corporation, CREST, Japan","Department of Computer Science, and UPBSB, The University of Tokyo, and Japan Science and Technology Corporation, CREST, Japan#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, and UPBSB, The University of Tokyo, and Japan Science and Technology Corporation, CREST, Japan","institution_ids":["https://openalex.org/I4210086780","https://openalex.org/I74801974"]},{"raw_affiliation_string":"Department of Computer Science, and UPBSB, The University of Tokyo, and Japan Science and Technology Corporation, CREST, Japan#TAB#","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113444758","display_name":"Akira Suyama","orcid":null},"institutions":[{"id":"https://openalex.org/I4210086780","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19","country_code":"JP","type":"government","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210086780"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Akira Suyama","raw_affiliation_strings":["Institute of Physics, The University of Tokyo, and Japan Science and Technology Corporation, CREST, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Physics, The University of Tokyo, and Japan Science and Technology Corporation, CREST, Japan","institution_ids":["https://openalex.org/I4210086780","https://openalex.org/I74801974"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5088074620"],"corresponding_institution_ids":["https://openalex.org/I4210086780","https://openalex.org/I74801974"],"apc_list":{"value":2890,"currency":"USD","value_usd":2890},"apc_paid":null,"fwci":0.4535,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.58636226,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"3","issue":"4","first_page":"411","last_page":"426"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.755881667137146},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5862346291542053},{"id":"https://openalex.org/keywords/principal","display_name":"Principal (computer security)","score":0.48010802268981934},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.43820029497146606},{"id":"https://openalex.org/keywords/theory-of-computation","display_name":"Theory of computation","score":0.43100571632385254},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.4132886826992035},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.17451244592666626}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.755881667137146},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5862346291542053},{"id":"https://openalex.org/C144559511","wikidata":"https://www.wikidata.org/wiki/Q2986279","display_name":"Principal (computer security)","level":2,"score":0.48010802268981934},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.43820029497146606},{"id":"https://openalex.org/C24858836","wikidata":"https://www.wikidata.org/wiki/Q844718","display_name":"Theory of computation","level":2,"score":0.43100571632385254},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.4132886826992035},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.17451244592666626},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s11047-004-2643-x","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11047-004-2643-x","pdf_url":null,"source":{"id":"https://openalex.org/S149828480","display_name":"Natural Computing","issn_l":"1567-7818","issn":["1567-7818","1572-9796"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Natural Computing","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W111213550","https://openalex.org/W176261813","https://openalex.org/W329913983","https://openalex.org/W979501463","https://openalex.org/W1504770578","https://openalex.org/W1510923188","https://openalex.org/W1530020425","https://openalex.org/W1534863302","https://openalex.org/W1586602730","https://openalex.org/W1608587956","https://openalex.org/W1799632286","https://openalex.org/W1959245158","https://openalex.org/W1968860042","https://openalex.org/W1977312644","https://openalex.org/W1981269762","https://openalex.org/W1984675364","https://openalex.org/W1988220558","https://openalex.org/W1990560699","https://openalex.org/W2008779826","https://openalex.org/W2014462280","https://openalex.org/W2031214412","https://openalex.org/W2031369081","https://openalex.org/W2053937805","https://openalex.org/W2054325207","https://openalex.org/W2056511887","https://openalex.org/W2067008143","https://openalex.org/W2068290715","https://openalex.org/W2070484449","https://openalex.org/W2074993099","https://openalex.org/W2077086564","https://openalex.org/W2092820948","https://openalex.org/W2093381148","https://openalex.org/W2101860996","https://openalex.org/W2103250001","https://openalex.org/W2110975678","https://openalex.org/W2112333437","https://openalex.org/W2114627379","https://openalex.org/W2142183404","https://openalex.org/W2161634702","https://openalex.org/W2162166182","https://openalex.org/W2170931604","https://openalex.org/W2608429143","https://openalex.org/W2609175771","https://openalex.org/W2610851698","https://openalex.org/W2999129308","https://openalex.org/W4285719527","https://openalex.org/W4301173492"],"related_works":["https://openalex.org/W236190221","https://openalex.org/W2379779959","https://openalex.org/W2333822231","https://openalex.org/W2046435967","https://openalex.org/W2394141650","https://openalex.org/W2390200212","https://openalex.org/W2388028180","https://openalex.org/W2105505991","https://openalex.org/W1967372967","https://openalex.org/W2762130752"],"abstract_inverted_index":null,"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
