{"id":"https://openalex.org/W4304957908","doi":"https://doi.org/10.1007/s11042-022-13916-7","title":"A new method for mining information of gut microbiome with probabilistic topic models","display_name":"A new method for mining information of gut microbiome with probabilistic topic models","publication_year":2022,"publication_date":"2022-10-13","ids":{"openalex":"https://openalex.org/W4304957908","doi":"https://doi.org/10.1007/s11042-022-13916-7"},"language":"en","primary_location":{"id":"doi:10.1007/s11042-022-13916-7","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11042-022-13916-7","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11042-022-13916-7.pdf","source":{"id":"https://openalex.org/S110206669","display_name":"Multimedia Tools and Applications","issn_l":"1380-7501","issn":["1380-7501","1573-7721"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Multimedia Tools and Applications","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s11042-022-13916-7.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076401090","display_name":"Xin Xiong","orcid":"https://orcid.org/0000-0001-9861-9239"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Xiong","raw_affiliation_strings":["Computer Technology Application Key Laboratory of Yunnan Province, Kunming University of Science and Technology, 650500, Kunming, China","Faculty of Information Engineering and Automation, Kunming University of Science and Technology, 650500, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Technology Application Key Laboratory of Yunnan Province, Kunming University of Science and Technology, 650500, Kunming, China","institution_ids":["https://openalex.org/I10660446"]},{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, 650500, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042347725","display_name":"Minrui Li","orcid":"https://orcid.org/0000-0002-9925-8014"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Minrui Li","raw_affiliation_strings":["Faculty of Information Engineering and Automation, Kunming University of Science and Technology, 650500, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, 650500, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075425762","display_name":"Yuyan Ren","orcid":null},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuyan Ren","raw_affiliation_strings":["Faculty of Information Engineering and Automation, Kunming University of Science and Technology, 650500, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, 650500, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078451442","display_name":"Xusheng Yao","orcid":"https://orcid.org/0000-0002-4461-2848"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xusheng Yao","raw_affiliation_strings":["Faculty of Information Engineering and Automation, Kunming University of Science and Technology, 650500, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, 650500, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113166286","display_name":"Yuhui Du","orcid":"https://orcid.org/0000-0002-2036-5408"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuhui Du","raw_affiliation_strings":["Faculty of Medicine, Kunming University of Science and Technology, 650500, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Medicine, Kunming University of Science and Technology, 650500, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034876550","display_name":"Qingsong Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qingsong Huang","raw_affiliation_strings":["Computer Technology Application Key Laboratory of Yunnan Province, Kunming University of Science and Technology, 650500, Kunming, China","Faculty of Information Engineering and Automation, Kunming University of Science and Technology, 650500, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Technology Application Key Laboratory of Yunnan Province, Kunming University of Science and Technology, 650500, Kunming, China","institution_ids":["https://openalex.org/I10660446"]},{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, 650500, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026534206","display_name":"Xiangyang Kong","orcid":"https://orcid.org/0000-0001-8184-2493"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiangyang Kong","raw_affiliation_strings":["Faculty of Medicine, Kunming University of Science and Technology, 650500, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Medicine, Kunming University of Science and Technology, 650500, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062082438","display_name":"Jianfeng He","orcid":"https://orcid.org/0000-0001-6995-2980"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jianfeng He","raw_affiliation_strings":["Faculty of Information Engineering and Automation, Kunming University of Science and Technology, 650500, Kunming, China","Yunnan Key Laboratory of Artificial Intelligence, Kunming University of Science and Technology, 650500, Kunming, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, 650500, Kunming, China","institution_ids":["https://openalex.org/I10660446"]},{"raw_affiliation_string":"Yunnan Key Laboratory of Artificial Intelligence, Kunming University of Science and Technology, 650500, Kunming, China","institution_ids":["https://openalex.org/I10660446"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5062082438"],"corresponding_institution_ids":["https://openalex.org/I10660446"],"apc_list":{"value":2890,"currency":"USD","value_usd":2890},"apc_paid":{"value":2890,"currency":"USD","value_usd":2890},"fwci":0.0783,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.38622885,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"82","issue":"11","first_page":"16081","last_page":"16104"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9812999963760376,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10775","display_name":"Generative Adversarial Networks and Image Synthesis","score":0.9391999840736389,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.9102820158004761},{"id":"https://openalex.org/keywords/gut-microbiome","display_name":"Gut microbiome","score":0.6892188191413879},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6200557947158813},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5842389464378357},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.5603545904159546},{"id":"https://openalex.org/keywords/human-microbiome-project","display_name":"Human Microbiome Project","score":0.5122835040092468},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.44371458888053894},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4115731716156006},{"id":"https://openalex.org/keywords/human-microbiome","display_name":"Human microbiome","score":0.3410426378250122},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2931528687477112},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.29035067558288574},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2565222978591919},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.12326470017433167}],"concepts":[{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.9102820158004761},{"id":"https://openalex.org/C3019978661","wikidata":"https://www.wikidata.org/wiki/Q739734","display_name":"Gut microbiome","level":3,"score":0.6892188191413879},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6200557947158813},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5842389464378357},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.5603545904159546},{"id":"https://openalex.org/C190944805","wikidata":"https://www.wikidata.org/wiki/Q3922751","display_name":"Human Microbiome Project","level":4,"score":0.5122835040092468},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.44371458888053894},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4115731716156006},{"id":"https://openalex.org/C91478284","wikidata":"https://www.wikidata.org/wiki/Q6623796","display_name":"Human microbiome","level":3,"score":0.3410426378250122},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2931528687477112},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.29035067558288574},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2565222978591919},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.12326470017433167}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s11042-022-13916-7","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11042-022-13916-7","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11042-022-13916-7.pdf","source":{"id":"https://openalex.org/S110206669","display_name":"Multimedia Tools and Applications","issn_l":"1380-7501","issn":["1380-7501","1573-7721"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Multimedia Tools and Applications","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1007/s11042-022-13916-7","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s11042-022-13916-7","pdf_url":"https://link.springer.com/content/pdf/10.1007/s11042-022-13916-7.pdf","source":{"id":"https://openalex.org/S110206669","display_name":"Multimedia Tools and Applications","issn_l":"1380-7501","issn":["1380-7501","1573-7721"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Multimedia Tools and Applications","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.7300000190734863}],"awards":[{"id":"https://openalex.org/G368163980","display_name":"\u57fa\u4e8ePET/CT\u63a2\u6d4b\u5668\u7075\u654f\u5ea6\u7279\u6027\u7684\u547c\u5438\u8fd0\u52a8\u4f2a\u5f71\u6821\u6b63\u7814\u7a76","funder_award_id":"11265007","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3766633947","display_name":"\u8fd0\u52a8\u53c2\u6570\u60f3\u8c61\u5bf9\u8111\u7535\u5fae\u72b6\u6001\u7684\u8c03\u5236\u673a\u5236\u548c\u8bc6\u522b\u65b9\u6cd5\u7814\u7a76","funder_award_id":"82060329","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4462163086","display_name":"\u9762\u5411\u5927\u89c4\u6a21\u533b\u5b66\u56fe\u50cf\u53ca\u8bca\u65ad\u62a5\u544a\u7684\u8de8\u6a21\u6001\u68c0\u7d22\u5173\u952e\u6280\u672f\u7814\u7a76","funder_award_id":"81860318","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4304957908.pdf","grobid_xml":"https://content.openalex.org/works/W4304957908.grobid-xml"},"referenced_works_count":50,"referenced_works":["https://openalex.org/W1601670221","https://openalex.org/W1746680969","https://openalex.org/W1968105193","https://openalex.org/W1976416345","https://openalex.org/W1979006961","https://openalex.org/W1991310235","https://openalex.org/W2001082470","https://openalex.org/W2017796714","https://openalex.org/W2020842694","https://openalex.org/W2023615726","https://openalex.org/W2032230795","https://openalex.org/W2042980227","https://openalex.org/W2053801811","https://openalex.org/W2063392856","https://openalex.org/W2071841602","https://openalex.org/W2075623226","https://openalex.org/W2083501377","https://openalex.org/W2083717261","https://openalex.org/W2096436906","https://openalex.org/W2104210067","https://openalex.org/W2111993661","https://openalex.org/W2115763995","https://openalex.org/W2122060988","https://openalex.org/W2129974743","https://openalex.org/W2132893095","https://openalex.org/W2134731454","https://openalex.org/W2135989088","https://openalex.org/W2149515881","https://openalex.org/W2156909104","https://openalex.org/W2159849240","https://openalex.org/W2167454999","https://openalex.org/W2168625136","https://openalex.org/W2171836785","https://openalex.org/W2267973470","https://openalex.org/W2284126852","https://openalex.org/W2486281000","https://openalex.org/W2519794569","https://openalex.org/W2750086765","https://openalex.org/W2768205191","https://openalex.org/W2769209214","https://openalex.org/W2896617742","https://openalex.org/W2911964244","https://openalex.org/W2947220628","https://openalex.org/W2948397587","https://openalex.org/W2950169452","https://openalex.org/W2963319967","https://openalex.org/W3000732706","https://openalex.org/W3193235282","https://openalex.org/W4233135949","https://openalex.org/W4235169531"],"related_works":["https://openalex.org/W1994105594","https://openalex.org/W1222064643","https://openalex.org/W2898240975","https://openalex.org/W3034541089","https://openalex.org/W4386025850","https://openalex.org/W2969529002","https://openalex.org/W1741324201","https://openalex.org/W2320874112","https://openalex.org/W3000104810","https://openalex.org/W3125261833"],"abstract_inverted_index":{"Abstract":[0],"Microbiome":[1],"is":[2,12],"closely":[3],"related":[4],"to":[5,60,89,93,110,160,167],"many":[6],"major":[7],"human":[8],"diseases,":[9],"but":[10],"it":[11],"generally":[13],"analyzed":[14],"by":[15],"the":[16,37,40,45,62,94,112,134,141,149,162,176,189,194,203,216,224,229,240],"traditional":[17],"statistical":[18],"methods":[19,30],"such":[20],"as":[21,81,140],"principal":[22,25],"component":[23],"analysis,":[24,27],"coordinate":[26],"etc.":[28],"These":[29],"have":[31],"shortcomings":[32],"and":[33,78,101,126,146,172,188,196,202,223],"do":[34],"not":[35],"consider":[36],"characteristics":[38,142,230],"of":[39,48,64,73,96,115,143,151,164,206,231,242],"microbiome":[41,66,72,91,100,117,153,182,221],"data":[42],"itself":[43],"(i.e.,":[44,118],"\u201cprobability":[46],"distribution\u201d":[47],"microbiome).":[49],"A":[50],"new":[51,237],"method":[52,166,213],"based":[53],"on":[54,175],"probabilistic":[55,105,113],"topic":[56,106,128],"model":[57,107],"was":[58,108],"proposed":[59,212],"mine":[61,215],"information":[63,217],"gut":[65,71,116,144,152,169,181,220,232,243],"in":[67,158,183,219],"this":[68,165],"paper,":[69],"taking":[70],"type":[74],"2":[75],"diabetes":[76],"patients":[77],"healthy":[79],"subjects":[80],"an":[82],"example.":[83],"Firstly,":[84],"different":[85,90,99,155],"weights":[86],"were":[87,186],"assigned":[88],"according":[92],"degree":[95],"correlation":[97],"between":[98],"subjects.":[102],"Then":[103],"a":[104,236],"employed":[109],"obtain":[111],"distribution":[114,125],"per-topic":[119],"OTU":[120],"(operational":[121],"taxonomic":[122],"units,":[123],"OTU)":[124],"per-patient":[127],"distribution).":[129],"Experimental":[130],"results":[131,191],"showed":[132,192],"that":[133,193],"output":[135,225],"topics":[136,179,226],"can":[137,147],"be":[138],"used":[139],"microbiome,":[145,170,233],"describe":[148,228],"differences":[150],"over":[154,178],"groups.":[156],"Furthermore,":[157],"order":[159],"verify":[161],"ability":[163],"characterize":[168],"clustering":[171,195],"classification":[173,197],"operations":[174],"distributions":[177],"for":[180,239],"each":[184],"subject":[185],"performed,":[187],"experimental":[190],"performance":[198],"has":[199],"been":[200],"improved,":[201],"recognition":[204],"rate":[205],"three":[207],"groups":[208],"reached":[209],"100%.":[210],"The":[211],"could":[214,227],"hidden":[218],"data,":[222],"which":[234],"provides":[235],"perspective":[238],"study":[241],"microbiome.":[244]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
