{"id":"https://openalex.org/W3086847030","doi":"https://doi.org/10.1007/s11042-020-09598-8","title":"DeepRibSt: a multi-feature convolutional neural network for predicting ribosome stalling","display_name":"DeepRibSt: a multi-feature convolutional neural network for predicting ribosome stalling","publication_year":2020,"publication_date":"2020-09-10","ids":{"openalex":"https://openalex.org/W3086847030","doi":"https://doi.org/10.1007/s11042-020-09598-8","mag":"3086847030"},"language":"en","primary_location":{"id":"doi:10.1007/s11042-020-09598-8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11042-020-09598-8","pdf_url":null,"source":{"id":"https://openalex.org/S110206669","display_name":"Multimedia Tools and Applications","issn_l":"1380-7501","issn":["1380-7501","1573-7721"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Multimedia Tools and Applications","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100368734","display_name":"Yuan Zhang","orcid":"https://orcid.org/0000-0002-8019-7944"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yuan Zhang","raw_affiliation_strings":["Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, 411105, China","School of Mathematics and Computational Science, Xiangtan University, Xiangtan, 411105, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, 411105, China","institution_ids":["https://openalex.org/I4610292"]},{"raw_affiliation_string":"School of Mathematics and Computational Science, Xiangtan University, Xiangtan, 411105, China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100369648","display_name":"Sai Zhang","orcid":"https://orcid.org/0000-0001-5996-6086"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sai Zhang","raw_affiliation_strings":["Department of Genetics, Stanford University School of Medicine, Stanford, CA, 94305-5101, USA"],"affiliations":[{"raw_affiliation_string":"Department of Genetics, Stanford University School of Medicine, Stanford, CA, 94305-5101, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001232812","display_name":"Xizhi He","orcid":null},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xizhi He","raw_affiliation_strings":["Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, 411105, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, 411105, China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059632088","display_name":"Jing L\u00fc","orcid":"https://orcid.org/0000-0001-9683-3768"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing Lu","raw_affiliation_strings":["Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, 411105, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, 411105, China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010870600","display_name":"Xieping Gao","orcid":"https://orcid.org/0000-0002-7764-3616"},"institutions":[{"id":"https://openalex.org/I43081956","display_name":"Xiangnan University","ror":"https://ror.org/05by9mg64","country_code":"CN","type":"education","lineage":["https://openalex.org/I43081956"]},{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xieping Gao","raw_affiliation_strings":["College of Medical Imaging and Inspection, Xiangnan University, Chenzhou, 423000, China","Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, 411105, China"],"affiliations":[{"raw_affiliation_string":"College of Medical Imaging and Inspection, Xiangnan University, Chenzhou, 423000, China","institution_ids":["https://openalex.org/I43081956"]},{"raw_affiliation_string":"Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, 411105, China","institution_ids":["https://openalex.org/I4610292"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5100368734"],"corresponding_institution_ids":["https://openalex.org/I4610292"],"apc_list":null,"apc_paid":null,"fwci":0.0836,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.454692,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"80","issue":"11","first_page":"17239","last_page":"17255"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9769999980926514,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.9276118278503418},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.7757631540298462},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.6649248003959656},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5716720223426819},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4057869613170624},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3212447464466095}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.9276118278503418},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.7757631540298462},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.6649248003959656},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5716720223426819},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4057869613170624},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3212447464466095},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s11042-020-09598-8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s11042-020-09598-8","pdf_url":null,"source":{"id":"https://openalex.org/S110206669","display_name":"Multimedia Tools and Applications","issn_l":"1380-7501","issn":["1380-7501","1573-7721"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Multimedia Tools and Applications","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1339473012","display_name":null,"funder_award_id":"61972333","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2672142798","display_name":null,"funder_award_id":"61802328","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3497966262","display_name":null,"funder_award_id":"61771415","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6564500664","display_name":null,"funder_award_id":"19B561","funder_id":"https://openalex.org/F4320333642","funder_display_name":"Scientific Research Foundation of Hunan Provincial Education Department"},{"id":"https://openalex.org/G8879139198","display_name":null,"funder_award_id":"2019JJ50606","funder_id":"https://openalex.org/F4320322843","funder_display_name":"Natural Science Foundation of\u00a0Hunan Province"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322843","display_name":"Natural Science Foundation of\u00a0Hunan Province","ror":null},{"id":"https://openalex.org/F4320333642","display_name":"Scientific Research Foundation of Hunan Provincial Education Department","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":57,"referenced_works":["https://openalex.org/W64510277","https://openalex.org/W577444057","https://openalex.org/W594865064","https://openalex.org/W1019830208","https://openalex.org/W1539868719","https://openalex.org/W1565619177","https://openalex.org/W1902568950","https://openalex.org/W1940872118","https://openalex.org/W1951403192","https://openalex.org/W1988881859","https://openalex.org/W2006936482","https://openalex.org/W2026570758","https://openalex.org/W2026593599","https://openalex.org/W2044286001","https://openalex.org/W2057850601","https://openalex.org/W2063742123","https://openalex.org/W2065371606","https://openalex.org/W2066805748","https://openalex.org/W2070605140","https://openalex.org/W2071849521","https://openalex.org/W2079517684","https://openalex.org/W2082047304","https://openalex.org/W2101010252","https://openalex.org/W2101234009","https://openalex.org/W2105575738","https://openalex.org/W2112796928","https://openalex.org/W2117130368","https://openalex.org/W2131581981","https://openalex.org/W2145191876","https://openalex.org/W2145203699","https://openalex.org/W2154232977","https://openalex.org/W2163605009","https://openalex.org/W2163769993","https://openalex.org/W2167852161","https://openalex.org/W2168138973","https://openalex.org/W2168621448","https://openalex.org/W2170513170","https://openalex.org/W2175136759","https://openalex.org/W2194775991","https://openalex.org/W2269056654","https://openalex.org/W2269252064","https://openalex.org/W2306137721","https://openalex.org/W2433743436","https://openalex.org/W2514286655","https://openalex.org/W2551021318","https://openalex.org/W2576351606","https://openalex.org/W2707890836","https://openalex.org/W2791062765","https://openalex.org/W2806518291","https://openalex.org/W2806745472","https://openalex.org/W2884170967","https://openalex.org/W2900870219","https://openalex.org/W2920882913","https://openalex.org/W2950463913","https://openalex.org/W2964944781","https://openalex.org/W2969911760","https://openalex.org/W6600654476"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W3046775127","https://openalex.org/W3107602296","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W4364306694","https://openalex.org/W4312192474","https://openalex.org/W2033914206","https://openalex.org/W4283697347"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2025-10-10T00:00:00"}
