{"id":"https://openalex.org/W4416552925","doi":"https://doi.org/10.1007/s10916-025-02302-z","title":"Infectious, Allergic, and Immune-Mediated Disease Data Resources: a Landscape Overview and Subset Assessment","display_name":"Infectious, Allergic, and Immune-Mediated Disease Data Resources: a Landscape Overview and Subset Assessment","publication_year":2025,"publication_date":"2025-11-22","ids":{"openalex":"https://openalex.org/W4416552925","doi":"https://doi.org/10.1007/s10916-025-02302-z","pmid":"https://pubmed.ncbi.nlm.nih.gov/41273456"},"language":"en","primary_location":{"id":"doi:10.1007/s10916-025-02302-z","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10916-025-02302-z","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10916-025-02302-z.pdf","source":{"id":"https://openalex.org/S37151855","display_name":"Journal of Medical Systems","issn_l":"0148-5598","issn":["0148-5598","1573-689X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Medical Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s10916-025-02302-z.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042334319","display_name":"Darya Pokutnaya","orcid":"https://orcid.org/0000-0003-4699-8411"},"institutions":[{"id":"https://openalex.org/I4210134534","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210134534"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Darya Pokutnaya","raw_affiliation_strings":["Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America. dasha.pokutnaya@nih.gov","Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America"],"raw_orcid":"https://orcid.org/0000-0003-4699-8411","affiliations":[{"raw_affiliation_string":"Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America. dasha.pokutnaya@nih.gov","institution_ids":["https://openalex.org/I4210134534"]},{"raw_affiliation_string":"Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America","institution_ids":["https://openalex.org/I4210134534"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Lisa M. Mayer","orcid":"https://orcid.org/0000-0001-8499-3043"},"institutions":[{"id":"https://openalex.org/I4210134534","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210134534"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lisa M. Mayer","raw_affiliation_strings":["Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America"],"raw_orcid":"https://orcid.org/0000-0001-8499-3043","affiliations":[{"raw_affiliation_string":"Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America","institution_ids":["https://openalex.org/I4210134534"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028402761","display_name":"Sydney Foote","orcid":"https://orcid.org/0000-0002-2351-6910"},"institutions":[{"id":"https://openalex.org/I4210134534","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210134534"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sydney Foote","raw_affiliation_strings":["Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-2351-6910","affiliations":[{"raw_affiliation_string":"Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America","institution_ids":["https://openalex.org/I4210134534"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Meghan Hartwick","orcid":"https://orcid.org/0000-0003-0915-4172"},"institutions":[{"id":"https://openalex.org/I4210134534","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210134534"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Meghan Hartwick","raw_affiliation_strings":["Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America"],"raw_orcid":"https://orcid.org/0000-0003-0915-4172","affiliations":[{"raw_affiliation_string":"Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America","institution_ids":["https://openalex.org/I4210134534"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019109860","display_name":"Sepideh Mazrouee","orcid":"https://orcid.org/0000-0002-2055-5666"},"institutions":[{"id":"https://openalex.org/I4210091794","display_name":"Office of the Director","ror":"https://ror.org/00fj8a872","country_code":"US","type":"other","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210091794"]},{"id":"https://openalex.org/I4210134534","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210134534"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sepideh Mazrouee","raw_affiliation_strings":["Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America","Office of the Director, National Institute of Health, Bethesda, MD, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-2055-5666","affiliations":[{"raw_affiliation_string":"Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America","institution_ids":["https://openalex.org/I4210134534"]},{"raw_affiliation_string":"Office of the Director, National Institute of Health, Bethesda, MD, United States of America","institution_ids":["https://openalex.org/I4210091794"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063821021","display_name":"Willem G. van Panhuis","orcid":"https://orcid.org/0000-0002-7278-9982"},"institutions":[{"id":"https://openalex.org/I4210134534","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210134534"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Willem G. Van Panhuis","raw_affiliation_strings":["Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-7278-9982","affiliations":[{"raw_affiliation_string":"Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America","institution_ids":["https://openalex.org/I4210134534"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033840109","display_name":"Reed S. Shabman","orcid":"https://orcid.org/0000-0003-3272-3484"},"institutions":[{"id":"https://openalex.org/I4210134534","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210134534"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Reed Shabman","raw_affiliation_strings":["Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America"],"raw_orcid":"https://orcid.org/0000-0003-3272-3484","affiliations":[{"raw_affiliation_string":"Office of Data Science and Emerging Technologies, National Institute of Allergy and Infectious Diseases, Rockville, MD, United States of America","institution_ids":["https://openalex.org/I4210134534"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5042334319"],"corresponding_institution_ids":["https://openalex.org/I4210134534"],"apc_list":{"value":3390,"currency":"EUR","value_usd":4390},"apc_paid":{"value":3390,"currency":"EUR","value_usd":4390},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.47665725,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"49","issue":"1","first_page":"169","last_page":"169"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.6499000191688538,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.6499000191688538,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.10429999977350235,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.0406000018119812,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.73089998960495},{"id":"https://openalex.org/keywords/data-sharing","display_name":"Data sharing","score":0.6251999735832214},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.4772000014781952},{"id":"https://openalex.org/keywords/open-data","display_name":"Open data","score":0.44369998574256897},{"id":"https://openalex.org/keywords/data-access","display_name":"Data access","score":0.4262000024318695},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.4230000078678131},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.41100001335144043},{"id":"https://openalex.org/keywords/best-practice","display_name":"Best practice","score":0.3537999987602234},{"id":"https://openalex.org/keywords/disease-surveillance","display_name":"Disease surveillance","score":0.3154999911785126}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.73089998960495},{"id":"https://openalex.org/C2779965156","wikidata":"https://www.wikidata.org/wiki/Q5227350","display_name":"Data sharing","level":3,"score":0.6251999735832214},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5568000078201294},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5187000036239624},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.4772000014781952},{"id":"https://openalex.org/C2780535194","wikidata":"https://www.wikidata.org/wiki/Q309901","display_name":"Open data","level":2,"score":0.44369998574256897},{"id":"https://openalex.org/C47487241","wikidata":"https://www.wikidata.org/wiki/Q5227230","display_name":"Data access","level":2,"score":0.4262000024318695},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.4230000078678131},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.41100001335144043},{"id":"https://openalex.org/C184356942","wikidata":"https://www.wikidata.org/wiki/Q830382","display_name":"Best practice","level":2,"score":0.3537999987602234},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3303999900817871},{"id":"https://openalex.org/C2776480101","wikidata":"https://www.wikidata.org/wiki/Q3555250","display_name":"Disease surveillance","level":3,"score":0.3154999911785126},{"id":"https://openalex.org/C3017977704","wikidata":"https://www.wikidata.org/wiki/Q18745135","display_name":"Health data","level":3,"score":0.3149000108242035},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.31279999017715454},{"id":"https://openalex.org/C3102742","wikidata":"https://www.wikidata.org/wiki/Q6031177","display_name":"Information repository","level":3,"score":0.31139999628067017},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.31130000948905945},{"id":"https://openalex.org/C2779494480","wikidata":"https://www.wikidata.org/wiki/Q188728","display_name":"Information Dissemination","level":2,"score":0.3100000023841858},{"id":"https://openalex.org/C101780184","wikidata":"https://www.wikidata.org/wiki/Q840576","display_name":"Dissemination","level":2,"score":0.3050000071525574},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.30160000920295715},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.2992999851703644},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.2915000021457672},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.28290000557899475},{"id":"https://openalex.org/C163293594","wikidata":"https://www.wikidata.org/wiki/Q7834541","display_name":"Translational bioinformatics","level":5,"score":0.26989999413490295},{"id":"https://openalex.org/C2777516300","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data discovery","level":3,"score":0.2651999890804291},{"id":"https://openalex.org/C56739046","wikidata":"https://www.wikidata.org/wiki/Q192060","display_name":"Knowledge management","level":1,"score":0.26249998807907104},{"id":"https://openalex.org/C2776356880","wikidata":"https://www.wikidata.org/wiki/Q5381206","display_name":"Environmental data","level":2,"score":0.25859999656677246},{"id":"https://openalex.org/C2777855551","wikidata":"https://www.wikidata.org/wiki/Q12310021","display_name":"Subject (documents)","level":2,"score":0.25690001249313354}],"mesh":[{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006967","descriptor_name":"Hypersensitivity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006967","descriptor_name":"Hypersensitivity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006967","descriptor_name":"Hypersensitivity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007154","descriptor_name":"Immune System Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007154","descriptor_name":"Immune System Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007154","descriptor_name":"Immune System Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009316","descriptor_name":"National Institutes of Health (U.S.)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009316","descriptor_name":"National Institutes of Health (U.S.)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009316","descriptor_name":"National Institutes of Health (U.S.)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D054579","descriptor_name":"National Institute of Allergy and Infectious Diseases (U.S.)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054579","descriptor_name":"National Institute of Allergy and Infectious Diseases (U.S.)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054579","descriptor_name":"National Institute of Allergy and Infectious Diseases (U.S.)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1007/s10916-025-02302-z","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10916-025-02302-z","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10916-025-02302-z.pdf","source":{"id":"https://openalex.org/S37151855","display_name":"Journal of Medical Systems","issn_l":"0148-5598","issn":["0148-5598","1573-689X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Medical Systems","raw_type":"journal-article"},{"id":"pmid:41273456","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41273456","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of medical systems","raw_type":null},{"id":"pmh:oai:europepmc.org:11447139","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12640313","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12640313/pdf/10916_2025_Article_2302.pdf","source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1007/s10916-025-02302-z","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10916-025-02302-z","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10916-025-02302-z.pdf","source":{"id":"https://openalex.org/S37151855","display_name":"Journal of Medical Systems","issn_l":"0148-5598","issn":["0148-5598","1573-689X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Medical Systems","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4416552925.pdf"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W2081930221","https://openalex.org/W2302501749","https://openalex.org/W2731189061","https://openalex.org/W2934450419","https://openalex.org/W2936782767","https://openalex.org/W3010809165","https://openalex.org/W3012598084","https://openalex.org/W3128940808","https://openalex.org/W3178997943","https://openalex.org/W3203333702","https://openalex.org/W4295951577","https://openalex.org/W4321611241","https://openalex.org/W4385759320","https://openalex.org/W4388126069","https://openalex.org/W4404320147","https://openalex.org/W4406472643","https://openalex.org/W4407111560"],"related_works":[],"abstract_inverted_index":{"The":[0,58,103],"Data":[1],"Management":[2],"and":[3,36,63,86,90,111,127,162,189,237,264,277,299,316,325,331,344,354],"Sharing":[4],"(DMS)":[5],"Policy":[6,56],"issued":[7],"by":[8,107,169],"the":[9,44,54,290,311,317],"National":[10,59],"Institutes":[11],"of":[12,61,99,135,149,313],"Health":[13],"(NIH)":[14],"requires":[15],"most":[16],"grant":[17],"applications":[18,76],"to":[19,48,52,68,131,320],"include":[20],"a":[21,37,97,121,133],"DMS":[22,55,73,305,352],"Plan,":[23],"detailing":[24],"data":[25,29,34,46,50,101,137,141,146,192,199,226,281,287,297,322,326,334,340,356],"type(s),":[26],"resources":[27,51,110,138,224,245,288,335,350],"(e.g.,":[28],"repositories,":[30],"knowledgebases,":[31],"portals)":[32],"for":[33,75,274,303,351],"sharing,":[35,341],"dissemination":[38],"timeline.":[39],"Researchers":[40],"face":[41],"challenges":[42,318],"navigating":[43],"complex":[45],"landscape":[47],"identify":[49],"fulfill":[53],"requirements.":[57],"Institute":[60],"Allergy":[62],"Infectious":[64,160],"Diseases":[65,161],"(NIAID)":[66],"aims":[67],"support":[69,84,140,296,337],"researchers":[70,346],"in":[71,289,347],"preparing":[72],"Plans":[74,353],"that":[77,139,295],"align":[78],"with":[79,206,249],"its":[80],"mission":[81],"areas.":[82],"To":[83],"depositing":[85],"accessing":[87],"infectious,":[88],"allergic,":[89],"immune-mediated":[91],"disease":[92],"(IID)":[93],"data,":[94],"we":[95,119],"compiled":[96],"list":[98,104],"IID":[100,136,153,291],"resources.":[102],"was":[105,200,272],"developed":[106,120],"reviewing":[108],"online":[109],"collecting":[112],"recommendations":[113,126],"from":[114],"subject":[115],"matter":[116],"experts.":[117],"Additionally,":[118],"questionnaire":[122],"based":[123],"on":[124,152],"NIH":[125,304],"community":[128],"best":[129],"practices":[130],"characterize":[132],"subset":[134],"submissions.":[142],"We":[143,284],"identified":[144],"303":[145],"resources,":[147,315],"58":[148,286],"which":[150],"focused":[151],"data.":[154],"Most":[155],"were":[156],"categorized":[157],"as":[158],"General":[159],"Pathogens":[163,171],"(n":[164,172,180,185,193,202,211,218],"=":[165,173,181,186,194,203,212,219],"29,":[166],"50%),":[167],"followed":[168],"Respiratory":[170],"10,":[174],"17%).":[175],"Scientific":[176],"content":[177],"included":[178],"\"omics\"":[179],"37,":[182],"64%),":[183],"clinical":[184],"21,":[187],"36%),":[188],"biological":[190],"assay":[191],"20,":[195,213],"34%).":[196],"Open":[197],"access":[198,210],"common":[201],"39,":[204],"67%),":[205],"fewer":[207],"offering":[208],"controlled":[209],"34%)":[214],"or":[215],"required":[216,230,240],"registration":[217],"4,":[220],"7%).":[221],"Among":[222],"19":[223,294],"accepting":[225],"submissions,":[227],"eight":[228],"(42%)":[229],"registration,":[231],"seven":[232],"(37%)":[233],"needed":[234],"additional":[235],"approvals,":[236],"four":[238],"(21%)":[239],"network":[241],"membership.":[242],"Fifteen":[243],"(79%)":[244],"provided":[246,261,280],"metadata":[247],"access,":[248],"11":[250],"(58%)":[251],"assigning":[252],"persistent":[253],"identifiers.":[254],"Twelve":[255],"(63%)":[256],"offered":[257],"APIs,":[258],"13":[259],"(68%)":[260],"analytical":[262],"tools,":[263],"10":[265,275],"(53%)":[266],"featured":[267],"workspaces.":[268],"Risk":[269],"management":[270,327],"documentation":[271],"available":[273,314],"(53%),":[276],"five":[278],"(26%)":[279],"retention":[282],"policies.":[283],"assessed":[285],"domain,":[292],"identifying":[293],"submission":[298,323],"are":[300],"therefore":[301],"suitable":[302],"Plans.":[306],"Our":[307],"findings":[308],"reveal":[309],"both":[310],"breadth":[312],"related":[319],"inconsistent":[321],"requirements":[324],"practices.":[328],"Enhancing":[329],"transparency":[330],"standardization":[332],"across":[333],"will":[336],"more":[338],"effective":[339],"enhance":[342],"findability,":[343],"aid":[345],"selecting":[348],"appropriate":[349],"secondary":[355],"analysis.":[357]},"counts_by_year":[],"updated_date":"2026-03-11T06:11:40.159057","created_date":"2025-11-23T00:00:00"}
