{"id":"https://openalex.org/W2003237067","doi":"https://doi.org/10.1007/s10898-012-9886-3","title":"Protein structure optimization by side-chain positioning via beta-complex","display_name":"Protein structure optimization by side-chain positioning via beta-complex","publication_year":2012,"publication_date":"2012-03-23","ids":{"openalex":"https://openalex.org/W2003237067","doi":"https://doi.org/10.1007/s10898-012-9886-3","mag":"2003237067"},"language":"en","primary_location":{"id":"doi:10.1007/s10898-012-9886-3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10898-012-9886-3","pdf_url":null,"source":{"id":"https://openalex.org/S115925768","display_name":"Journal of Global Optimization","issn_l":"0925-5001","issn":["0925-5001","1573-2916"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Global Optimization","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053586556","display_name":"Joonghyun Ryu","orcid":"https://orcid.org/0000-0002-6328-8094"},"institutions":[{"id":"https://openalex.org/I4575257","display_name":"Hanyang University","ror":"https://ror.org/046865y68","country_code":"KR","type":"education","lineage":["https://openalex.org/I4575257"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Joonghyun Ryu","raw_affiliation_strings":["Voronoi Diagram Research Center, Hanyang University, 17 Haengdang-dong, Seongdong-gu, Seoul, 133-791, South Korea","Voronoi Diagram Research Center, Hanyang University, Seoul, South Korea 133-791#TAB#"],"affiliations":[{"raw_affiliation_string":"Voronoi Diagram Research Center, Hanyang University, 17 Haengdang-dong, Seongdong-gu, Seoul, 133-791, South Korea","institution_ids":["https://openalex.org/I4575257"]},{"raw_affiliation_string":"Voronoi Diagram Research Center, Hanyang University, Seoul, South Korea 133-791#TAB#","institution_ids":["https://openalex.org/I4575257"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076077099","display_name":"Deok\u2010Soo Kim","orcid":"https://orcid.org/0000-0001-7855-2604"},"institutions":[{"id":"https://openalex.org/I4575257","display_name":"Hanyang University","ror":"https://ror.org/046865y68","country_code":"KR","type":"education","lineage":["https://openalex.org/I4575257"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Deok-Soo Kim","raw_affiliation_strings":["Department of Industrial Engineering, Hanyang University, 17 Haengdang-dong, Seongdong-gu, Seoul, 133-791, South Korea","Department of Industrial Engineering, Hanyang University, Seoul, South Korea 133-791#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Industrial Engineering, Hanyang University, 17 Haengdang-dong, Seongdong-gu, Seoul, 133-791, South Korea","institution_ids":["https://openalex.org/I4575257"]},{"raw_affiliation_string":"Department of Industrial Engineering, Hanyang University, Seoul, South Korea 133-791#TAB#","institution_ids":["https://openalex.org/I4575257"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5053586556"],"corresponding_institution_ids":["https://openalex.org/I4575257"],"apc_list":{"value":2190,"currency":"EUR","value_usd":2780},"apc_paid":null,"fwci":0.4022,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.61224271,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"57","issue":"1","first_page":"217","last_page":"250"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13326","display_name":"Biochemical and Structural Characterization","score":0.9713000059127808,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9700000286102295,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.615931510925293},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.5754812955856323},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.44909343123435974},{"id":"https://openalex.org/keywords/side-chain","display_name":"Side chain","score":0.42616862058639526},{"id":"https://openalex.org/keywords/protein-design","display_name":"Protein design","score":0.4240814447402954},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.41453611850738525},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4083710014820099},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3845927119255066},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1309240758419037}],"concepts":[{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.615931510925293},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.5754812955856323},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.44909343123435974},{"id":"https://openalex.org/C204921945","wikidata":"https://www.wikidata.org/wiki/Q899689","display_name":"Side chain","level":3,"score":0.42616862058639526},{"id":"https://openalex.org/C152769699","wikidata":"https://www.wikidata.org/wiki/Q410814","display_name":"Protein design","level":3,"score":0.4240814447402954},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.41453611850738525},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4083710014820099},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3845927119255066},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1309240758419037},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C521977710","wikidata":"https://www.wikidata.org/wiki/Q81163","display_name":"Polymer","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/s10898-012-9886-3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10898-012-9886-3","pdf_url":null,"source":{"id":"https://openalex.org/S115925768","display_name":"Journal of Global Optimization","issn_l":"0925-5001","issn":["0925-5001","1573-2916"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Global Optimization","raw_type":"journal-article"},{"id":"pmh:oai:RePEc:spr:jglopt:v:57:y:2013:i:1:p:217-250","is_oa":false,"landing_page_url":"http://hdl.handle.net/10.1007/s10898-012-9886-3","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5299999713897705,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":73,"referenced_works":["https://openalex.org/W570881241","https://openalex.org/W585972447","https://openalex.org/W1508596864","https://openalex.org/W1513338261","https://openalex.org/W1521042556","https://openalex.org/W1564062335","https://openalex.org/W1566883694","https://openalex.org/W1574312817","https://openalex.org/W1593617831","https://openalex.org/W1600248575","https://openalex.org/W1640313366","https://openalex.org/W1757046366","https://openalex.org/W1965030874","https://openalex.org/W1967841473","https://openalex.org/W1972728295","https://openalex.org/W1975947312","https://openalex.org/W1983562846","https://openalex.org/W1983595354","https://openalex.org/W1987977716","https://openalex.org/W1992426410","https://openalex.org/W1992739911","https://openalex.org/W1992904904","https://openalex.org/W1995990042","https://openalex.org/W2001514809","https://openalex.org/W2015403140","https://openalex.org/W2025786614","https://openalex.org/W2027189612","https://openalex.org/W2028843689","https://openalex.org/W2030841140","https://openalex.org/W2031263330","https://openalex.org/W2039506401","https://openalex.org/W2065569256","https://openalex.org/W2066129260","https://openalex.org/W2072969046","https://openalex.org/W2077143670","https://openalex.org/W2078290150","https://openalex.org/W2078362683","https://openalex.org/W2081044089","https://openalex.org/W2082221689","https://openalex.org/W2085497102","https://openalex.org/W2090950231","https://openalex.org/W2091477689","https://openalex.org/W2094722791","https://openalex.org/W2097649955","https://openalex.org/W2099148717","https://openalex.org/W2101712920","https://openalex.org/W2102805465","https://openalex.org/W2106648157","https://openalex.org/W2106775540","https://openalex.org/W2108505331","https://openalex.org/W2118116238","https://openalex.org/W2122199548","https://openalex.org/W2126539456","https://openalex.org/W2128607364","https://openalex.org/W2129618641","https://openalex.org/W2136085433","https://openalex.org/W2140248032","https://openalex.org/W2145778523","https://openalex.org/W2145896324","https://openalex.org/W2162166182","https://openalex.org/W2162215949","https://openalex.org/W2164130591","https://openalex.org/W2164750034","https://openalex.org/W2165465265","https://openalex.org/W2483921272","https://openalex.org/W2608434804","https://openalex.org/W2611076569","https://openalex.org/W2912717314","https://openalex.org/W2951597687","https://openalex.org/W4230223507","https://openalex.org/W4255743578","https://openalex.org/W4292414116","https://openalex.org/W6601616117"],"related_works":["https://openalex.org/W4280529929","https://openalex.org/W2946599741","https://openalex.org/W2368468053","https://openalex.org/W4387310732","https://openalex.org/W1564749278","https://openalex.org/W2968494487","https://openalex.org/W3216044760","https://openalex.org/W2013950502","https://openalex.org/W2402250173","https://openalex.org/W2171208795"],"abstract_inverted_index":null,"counts_by_year":[{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2014,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
