{"id":"https://openalex.org/W2063096021","doi":"https://doi.org/10.1007/s10878-012-9552-1","title":"An improved algorithm for tree edit distance with applications for RNA secondary structure comparison","display_name":"An improved algorithm for tree edit distance with applications for RNA secondary structure comparison","publication_year":2012,"publication_date":"2012-10-11","ids":{"openalex":"https://openalex.org/W2063096021","doi":"https://doi.org/10.1007/s10878-012-9552-1","mag":"2063096021"},"language":"en","primary_location":{"id":"doi:10.1007/s10878-012-9552-1","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10878-012-9552-1","pdf_url":null,"source":{"id":"https://openalex.org/S107925523","display_name":"Journal of Combinatorial Optimization","issn_l":"1382-6905","issn":["1382-6905","1573-2886"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Combinatorial Optimization","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042337644","display_name":"Shihyen Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I125749732","display_name":"Western University","ror":"https://ror.org/02grkyz14","country_code":"CA","type":"education","lineage":["https://openalex.org/I125749732"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Shihyen Chen","raw_affiliation_strings":["Department of Computer Science, The University of Western Ontario, London, Ontario, Canada, N6A 5B7","Department of Computer Science The University of Western Ontario London Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, The University of Western Ontario, London, Ontario, Canada, N6A 5B7","institution_ids":["https://openalex.org/I125749732"]},{"raw_affiliation_string":"Department of Computer Science The University of Western Ontario London Canada","institution_ids":["https://openalex.org/I125749732"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081729547","display_name":"Kaizhong Zhang","orcid":"https://orcid.org/0000-0003-1734-5921"},"institutions":[{"id":"https://openalex.org/I125749732","display_name":"Western University","ror":"https://ror.org/02grkyz14","country_code":"CA","type":"education","lineage":["https://openalex.org/I125749732"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Kaizhong Zhang","raw_affiliation_strings":["Department of Computer Science, The University of Western Ontario, London, Ontario, Canada, N6A 5B7","Department of Computer Science The University of Western Ontario London Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, The University of Western Ontario, London, Ontario, Canada, N6A 5B7","institution_ids":["https://openalex.org/I125749732"]},{"raw_affiliation_string":"Department of Computer Science The University of Western Ontario London Canada","institution_ids":["https://openalex.org/I125749732"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5081729547"],"corresponding_institution_ids":["https://openalex.org/I125749732"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":null,"fwci":0.2455,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.54663271,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"27","issue":"4","first_page":"778","last_page":"797"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/edit-distance","display_name":"Edit distance","score":0.8181049823760986},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.7381981015205383},{"id":"https://openalex.org/keywords/theory-of-computation","display_name":"Theory of computation","score":0.6883714199066162},{"id":"https://openalex.org/keywords/recursion","display_name":"Recursion (computer science)","score":0.6430782079696655},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6256304383277893},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5969586968421936},{"id":"https://openalex.org/keywords/speedup","display_name":"Speedup","score":0.5916096568107605},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.5571277141571045},{"id":"https://openalex.org/keywords/search-tree","display_name":"Search tree","score":0.5461295247077942},{"id":"https://openalex.org/keywords/tree-structure","display_name":"Tree structure","score":0.4964151978492737},{"id":"https://openalex.org/keywords/k-ary-tree","display_name":"K-ary tree","score":0.436554491519928},{"id":"https://openalex.org/keywords/interval-tree","display_name":"Interval tree","score":0.4361304044723511},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.41427624225616455},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.37340065836906433},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.36419814825057983},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.28365349769592285},{"id":"https://openalex.org/keywords/binary-tree","display_name":"Binary tree","score":0.24695700407028198},{"id":"https://openalex.org/keywords/search-algorithm","display_name":"Search algorithm","score":0.20892000198364258},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.10087963938713074}],"concepts":[{"id":"https://openalex.org/C44359876","wikidata":"https://www.wikidata.org/wiki/Q5338467","display_name":"Edit distance","level":2,"score":0.8181049823760986},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.7381981015205383},{"id":"https://openalex.org/C24858836","wikidata":"https://www.wikidata.org/wiki/Q844718","display_name":"Theory of computation","level":2,"score":0.6883714199066162},{"id":"https://openalex.org/C168773036","wikidata":"https://www.wikidata.org/wiki/Q264164","display_name":"Recursion (computer science)","level":2,"score":0.6430782079696655},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6256304383277893},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5969586968421936},{"id":"https://openalex.org/C68339613","wikidata":"https://www.wikidata.org/wiki/Q1549489","display_name":"Speedup","level":2,"score":0.5916096568107605},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.5571277141571045},{"id":"https://openalex.org/C207024777","wikidata":"https://www.wikidata.org/wiki/Q621673","display_name":"Search tree","level":3,"score":0.5461295247077942},{"id":"https://openalex.org/C163797641","wikidata":"https://www.wikidata.org/wiki/Q2067937","display_name":"Tree structure","level":3,"score":0.4964151978492737},{"id":"https://openalex.org/C100560664","wikidata":"https://www.wikidata.org/wiki/Q3608019","display_name":"K-ary tree","level":4,"score":0.436554491519928},{"id":"https://openalex.org/C84927040","wikidata":"https://www.wikidata.org/wiki/Q6057306","display_name":"Interval tree","level":4,"score":0.4361304044723511},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.41427624225616455},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.37340065836906433},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.36419814825057983},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.28365349769592285},{"id":"https://openalex.org/C197855036","wikidata":"https://www.wikidata.org/wiki/Q380172","display_name":"Binary tree","level":2,"score":0.24695700407028198},{"id":"https://openalex.org/C125583679","wikidata":"https://www.wikidata.org/wiki/Q755673","display_name":"Search algorithm","level":2,"score":0.20892000198364258},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.10087963938713074},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/s10878-012-9552-1","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10878-012-9552-1","pdf_url":null,"source":{"id":"https://openalex.org/S107925523","display_name":"Journal of Combinatorial Optimization","issn_l":"1382-6905","issn":["1382-6905","1573-2886"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Combinatorial Optimization","raw_type":"journal-article"},{"id":"pmh:oai:RePEc:spr:jcomop:v:27:y:2014:i:4:d:10.1007_s10878-012-9552-1","is_oa":false,"landing_page_url":"http://link.springer.com/10.1007/s10878-012-9552-1","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W1605903931","https://openalex.org/W1970026646","https://openalex.org/W1975009259","https://openalex.org/W1976373002","https://openalex.org/W1978478796","https://openalex.org/W1978872422","https://openalex.org/W2011999472","https://openalex.org/W2018804864","https://openalex.org/W2055257826","https://openalex.org/W2096827683","https://openalex.org/W2122377457","https://openalex.org/W2171643895"],"related_works":["https://openalex.org/W2150988524","https://openalex.org/W2063096021","https://openalex.org/W2592730620","https://openalex.org/W1559350420","https://openalex.org/W2619986165","https://openalex.org/W124283286","https://openalex.org/W2042498858","https://openalex.org/W1003868381","https://openalex.org/W2028509346","https://openalex.org/W1556571963"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
