{"id":"https://openalex.org/W2032123789","doi":"https://doi.org/10.1007/s10827-010-0293-9","title":"The impacts of geometry and binding on CaMKII diffusion and retention in dendritic spines","display_name":"The impacts of geometry and binding on CaMKII diffusion and retention in dendritic spines","publication_year":2010,"publication_date":"2010-11-22","ids":{"openalex":"https://openalex.org/W2032123789","doi":"https://doi.org/10.1007/s10827-010-0293-9","mag":"2032123789","pmid":"https://pubmed.ncbi.nlm.nih.gov/21104309"},"language":"en","primary_location":{"id":"doi:10.1007/s10827-010-0293-9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10827-010-0293-9","pdf_url":null,"source":{"id":"https://openalex.org/S27455496","display_name":"Journal of Computational Neuroscience","issn_l":"0929-5313","issn":["0929-5313","1573-6873"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computational Neuroscience","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3617044","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5021894365","display_name":"Michael Byrne","orcid":"https://orcid.org/0000-0001-9279-049X"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Michael J. Byrne","raw_affiliation_strings":["Department of Neurobiology and Anatomy, University of Texas Medical School, 6431 Fannin, Houston, TX 77030, USA","Department of Neurobiology and Anatomy, University of Texas Medical School, Houston, USA 77030#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Neurobiology and Anatomy, University of Texas Medical School, 6431 Fannin, Houston, TX 77030, USA","institution_ids":[]},{"raw_affiliation_string":"Department of Neurobiology and Anatomy, University of Texas Medical School, Houston, USA 77030#TAB#","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077004323","display_name":"M. Neal Waxham","orcid":"https://orcid.org/0000-0003-4801-1190"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"M. Neal Waxham","raw_affiliation_strings":["Department of Neurobiology and Anatomy, University of Texas Medical School, 6431 Fannin, Houston, TX, 77030, USA","Department of Neurobiology and Anatomy, University of Texas Medical School, Houston, USA 77030#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Neurobiology and Anatomy, University of Texas Medical School, 6431 Fannin, Houston, TX, 77030, USA","institution_ids":[]},{"raw_affiliation_string":"Department of Neurobiology and Anatomy, University of Texas Medical School, Houston, USA 77030#TAB#","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005016862","display_name":"Yoshihisa Kubota","orcid":"https://orcid.org/0000-0002-2807-1535"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yoshihisa Kubota","raw_affiliation_strings":["Department of Neurobiology and Anatomy, University of Texas Medical School, 6431 Fannin, Houston, TX, 77030, USA","Department of Neurobiology and Anatomy, University of Texas Medical School, Houston, USA 77030#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Neurobiology and Anatomy, University of Texas Medical School, 6431 Fannin, Houston, TX, 77030, USA","institution_ids":[]},{"raw_affiliation_string":"Department of Neurobiology and Anatomy, University of Texas Medical School, Houston, USA 77030#TAB#","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5021894365"],"corresponding_institution_ids":[],"apc_list":{"value":2590,"currency":"EUR","value_usd":3390},"apc_paid":null,"fwci":1.4089,"has_fulltext":false,"cited_by_count":44,"citation_normalized_percentile":{"value":0.78706357,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"31","issue":"1","first_page":"1","last_page":"12"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10077","display_name":"Neuroscience and Neuropharmacology Research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10077","display_name":"Neuroscience and Neuropharmacology Research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10532","display_name":"Molecular Sensors and Ion Detection","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12236","display_name":"Photoreceptor and optogenetics research","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dendritic-spine","display_name":"Dendritic spine","score":0.9054222702980042},{"id":"https://openalex.org/keywords/dendritic-filopodia","display_name":"Dendritic filopodia","score":0.6864681839942932},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.5313578248023987},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5307343602180481},{"id":"https://openalex.org/keywords/biophysics","display_name":"Biophysics","score":0.4872052073478699},{"id":"https://openalex.org/keywords/postsynaptic-density","display_name":"Postsynaptic density","score":0.4824245870113373},{"id":"https://openalex.org/keywords/postsynaptic-potential","display_name":"Postsynaptic potential","score":0.4675062596797943},{"id":"https://openalex.org/keywords/synaptic-plasticity","display_name":"Synaptic plasticity","score":0.44895046949386597},{"id":"https://openalex.org/keywords/hippocampal-formation","display_name":"Hippocampal formation","score":0.4447100758552551},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.4373517632484436},{"id":"https://openalex.org/keywords/dendrite","display_name":"Dendrite (mathematics)","score":0.42903661727905273},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3133935332298279},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.274931401014328},{"id":"https://openalex.org/keywords/receptor","display_name":"Receptor","score":0.13677358627319336},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.07880851626396179}],"concepts":[{"id":"https://openalex.org/C174884520","wikidata":"https://www.wikidata.org/wiki/Q902079","display_name":"Dendritic spine","level":3,"score":0.9054222702980042},{"id":"https://openalex.org/C53250682","wikidata":"https://www.wikidata.org/wiki/Q5256674","display_name":"Dendritic filopodia","level":4,"score":0.6864681839942932},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.5313578248023987},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5307343602180481},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.4872052073478699},{"id":"https://openalex.org/C187541742","wikidata":"https://www.wikidata.org/wiki/Q4374336","display_name":"Postsynaptic density","level":4,"score":0.4824245870113373},{"id":"https://openalex.org/C197341189","wikidata":"https://www.wikidata.org/wiki/Q863533","display_name":"Postsynaptic potential","level":3,"score":0.4675062596797943},{"id":"https://openalex.org/C98229152","wikidata":"https://www.wikidata.org/wiki/Q1551556","display_name":"Synaptic plasticity","level":3,"score":0.44895046949386597},{"id":"https://openalex.org/C148762608","wikidata":"https://www.wikidata.org/wiki/Q3748185","display_name":"Hippocampal formation","level":2,"score":0.4447100758552551},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.4373517632484436},{"id":"https://openalex.org/C84248122","wikidata":"https://www.wikidata.org/wiki/Q5256671","display_name":"Dendrite (mathematics)","level":2,"score":0.42903661727905273},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3133935332298279},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.274931401014328},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.13677358627319336},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.07880851626396179},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004058","descriptor_name":"Diffusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004058","descriptor_name":"Diffusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004058","descriptor_name":"Diffusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006624","descriptor_name":"Hippocampus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006624","descriptor_name":"Hippocampus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006624","descriptor_name":"Hippocampus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009010","descriptor_name":"Monte Carlo Method","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009010","descriptor_name":"Monte Carlo Method","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009010","descriptor_name":"Monte Carlo Method","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D049229","descriptor_name":"Dendritic Spines","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D049229","descriptor_name":"Dendritic Spines","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D049229","descriptor_name":"Dendritic Spines","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D054732","descriptor_name":"Calcium-Calmodulin-Dependent Protein Kinase Type 2","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D054732","descriptor_name":"Calcium-Calmodulin-Dependent Protein Kinase Type 2","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D054732","descriptor_name":"Calcium-Calmodulin-Dependent Protein Kinase Type 2","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1007/s10827-010-0293-9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10827-010-0293-9","pdf_url":null,"source":{"id":"https://openalex.org/S27455496","display_name":"Journal of Computational Neuroscience","issn_l":"0929-5313","issn":["0929-5313","1573-6873"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computational Neuroscience","raw_type":"journal-article"},{"id":"pmid:21104309","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21104309","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of computational neuroscience","raw_type":null},{"id":"pmh:oai:europepmc.org:2618918","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC3617044","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3617044","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3617044","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Comput Neurosci","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:3617044","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3617044","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Comput Neurosci","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":41,"referenced_works":["https://openalex.org/W1585828943","https://openalex.org/W1973242118","https://openalex.org/W1975786395","https://openalex.org/W1983330070","https://openalex.org/W1983553517","https://openalex.org/W1990999093","https://openalex.org/W1995898476","https://openalex.org/W1997956229","https://openalex.org/W1999117143","https://openalex.org/W2000656519","https://openalex.org/W2018554421","https://openalex.org/W2021235911","https://openalex.org/W2026064166","https://openalex.org/W2028110438","https://openalex.org/W2046033738","https://openalex.org/W2046320783","https://openalex.org/W2049217965","https://openalex.org/W2054366304","https://openalex.org/W2055584624","https://openalex.org/W2055862760","https://openalex.org/W2059223531","https://openalex.org/W2061499765","https://openalex.org/W2065642688","https://openalex.org/W2071910925","https://openalex.org/W2078401020","https://openalex.org/W2079704365","https://openalex.org/W2080213202","https://openalex.org/W2082845790","https://openalex.org/W2086456537","https://openalex.org/W2106495485","https://openalex.org/W2106791925","https://openalex.org/W2109889898","https://openalex.org/W2116408247","https://openalex.org/W2117664079","https://openalex.org/W2118069376","https://openalex.org/W2121980152","https://openalex.org/W2146033515","https://openalex.org/W2156961733","https://openalex.org/W2162673614","https://openalex.org/W2170201765","https://openalex.org/W6649501510"],"related_works":["https://openalex.org/W2153083261","https://openalex.org/W2039508969","https://openalex.org/W4200170201","https://openalex.org/W2091097296","https://openalex.org/W4211041102","https://openalex.org/W2168096237","https://openalex.org/W2056677165","https://openalex.org/W2090850820","https://openalex.org/W2017418037","https://openalex.org/W2030224387"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":6}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
