{"id":"https://openalex.org/W4386127112","doi":"https://doi.org/10.1007/s10822-023-00527-z","title":"ChemFlow_py: a flexible toolkit for docking and rescoring","display_name":"ChemFlow_py: a flexible toolkit for docking and rescoring","publication_year":2023,"publication_date":"2023-08-24","ids":{"openalex":"https://openalex.org/W4386127112","doi":"https://doi.org/10.1007/s10822-023-00527-z","pmid":"https://pubmed.ncbi.nlm.nih.gov/37620503"},"language":"en","primary_location":{"id":"doi:10.1007/s10822-023-00527-z","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-023-00527-z","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007462303","display_name":"Luca Monari","orcid":"https://orcid.org/0000-0002-1538-4081"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210096046","display_name":"Institut de Chimie de Strasbourg","ror":"https://ror.org/00se7bf12","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210096046","https://openalex.org/I4210128300","https://openalex.org/I68947357"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Luca Monari","raw_affiliation_strings":["Institut de Chimie de Strasbourg, UMR7177, CNRS, Universit\u00e9 de Strasbourg, 67083, Strasbourg, Cedex, France","Institut de Chimie de Strasbourg, UMR7177, CNRS, Universit\u00e9 de Strasbourg, Strasbourg, Cedex, France"],"raw_orcid":"https://orcid.org/0000-0002-1538-4081","affiliations":[{"raw_affiliation_string":"Institut de Chimie de Strasbourg, UMR7177, CNRS, Universit\u00e9 de Strasbourg, 67083, Strasbourg, Cedex, France","institution_ids":["https://openalex.org/I4210096046","https://openalex.org/I68947357","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Institut de Chimie de Strasbourg, UMR7177, CNRS, Universit\u00e9 de Strasbourg, Strasbourg, Cedex, France","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I4210096046","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051271533","display_name":"Katia Galentino","orcid":"https://orcid.org/0000-0001-6114-4006"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210096046","display_name":"Institut de Chimie de Strasbourg","ror":"https://ror.org/00se7bf12","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210096046","https://openalex.org/I4210128300","https://openalex.org/I68947357"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Katia Galentino","raw_affiliation_strings":["Institut de Chimie de Strasbourg, UMR7177, CNRS, Universit\u00e9 de Strasbourg, 67083, Strasbourg, Cedex, France","Institut de Chimie de Strasbourg, UMR7177, CNRS, Universit\u00e9 de Strasbourg, Strasbourg, Cedex, France"],"raw_orcid":"https://orcid.org/0000-0001-6114-4006","affiliations":[{"raw_affiliation_string":"Institut de Chimie de Strasbourg, UMR7177, CNRS, Universit\u00e9 de Strasbourg, 67083, Strasbourg, Cedex, France","institution_ids":["https://openalex.org/I4210096046","https://openalex.org/I68947357","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Institut de Chimie de Strasbourg, UMR7177, CNRS, Universit\u00e9 de Strasbourg, Strasbourg, Cedex, France","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I4210096046","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5054527529","display_name":"Marco Cecchini","orcid":"https://orcid.org/0000-0003-2671-1583"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210096046","display_name":"Institut de Chimie de Strasbourg","ror":"https://ror.org/00se7bf12","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210096046","https://openalex.org/I4210128300","https://openalex.org/I68947357"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Marco Cecchini","raw_affiliation_strings":["Institut de Chimie de Strasbourg, UMR7177, CNRS, Universit\u00e9 de Strasbourg, 67083, Strasbourg, Cedex, France. mcecchini@unistra.fr","Institut de Chimie de Strasbourg, UMR7177, CNRS, Universit\u00e9 de Strasbourg, Strasbourg, Cedex, France"],"raw_orcid":"https://orcid.org/0000-0003-2671-1583","affiliations":[{"raw_affiliation_string":"Institut de Chimie de Strasbourg, UMR7177, CNRS, Universit\u00e9 de Strasbourg, 67083, Strasbourg, Cedex, France. mcecchini@unistra.fr","institution_ids":["https://openalex.org/I4210096046","https://openalex.org/I68947357","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Institut de Chimie de Strasbourg, UMR7177, CNRS, Universit\u00e9 de Strasbourg, Strasbourg, Cedex, France","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I4210096046","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5054527529"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210096046","https://openalex.org/I68947357"],"apc_list":{"value":2890,"currency":"EUR","value_usd":3690},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.16934413,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"37","issue":"11","first_page":"565","last_page":"572"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11663","display_name":"Viral Infectious Diseases and Gene Expression in Insects","score":0.9616000056266785,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/virtual-screening","display_name":"Virtual screening","score":0.8287148475646973},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.777084469795227},{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.7543059587478638},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5215749144554138},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.43369966745376587},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41685229539871216},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3708074986934662},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.36381861567497253},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.20021843910217285},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08511394262313843},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.06898349523544312}],"concepts":[{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.8287148475646973},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.777084469795227},{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.7543059587478638},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5215749144554138},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.43369966745376587},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41685229539871216},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3708074986934662},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.36381861567497253},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.20021843910217285},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08511394262313843},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.06898349523544312},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1007/s10822-023-00527-z","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-023-00527-z","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},{"id":"pmid:37620503","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37620503","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of computer-aided molecular design","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5887011035","display_name":null,"funder_award_id":"17-EURE- 0016","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G7007175369","display_name":null,"funder_award_id":"DBI20141231319","funder_id":"https://openalex.org/F4320321589","funder_display_name":"Fondation pour la Recherche M\u00e9dicale"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320321589","display_name":"Fondation pour la Recherche M\u00e9dicale","ror":"https://ror.org/04w6kn183"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":37,"referenced_works":["https://openalex.org/W1031578623","https://openalex.org/W1500036797","https://openalex.org/W1516514628","https://openalex.org/W1968319881","https://openalex.org/W1969875513","https://openalex.org/W1979966120","https://openalex.org/W1980276147","https://openalex.org/W1984981677","https://openalex.org/W1988437166","https://openalex.org/W2028629022","https://openalex.org/W2030686695","https://openalex.org/W2031390939","https://openalex.org/W2044834685","https://openalex.org/W2070911978","https://openalex.org/W2071717945","https://openalex.org/W2080618096","https://openalex.org/W2105668062","https://openalex.org/W2108389384","https://openalex.org/W2112411768","https://openalex.org/W2134967712","https://openalex.org/W2151697120","https://openalex.org/W2388080941","https://openalex.org/W2514121929","https://openalex.org/W2893435209","https://openalex.org/W2925328267","https://openalex.org/W2961010564","https://openalex.org/W2971801381","https://openalex.org/W3000721979","https://openalex.org/W3027975282","https://openalex.org/W3093790176","https://openalex.org/W3118971166","https://openalex.org/W3168430821","https://openalex.org/W3172747904","https://openalex.org/W3195157142","https://openalex.org/W3199883166","https://openalex.org/W3214234430","https://openalex.org/W4313552198"],"related_works":["https://openalex.org/W3180887190","https://openalex.org/W2059230675","https://openalex.org/W2376003823","https://openalex.org/W2773493604","https://openalex.org/W2269591907","https://openalex.org/W2027065525","https://openalex.org/W2336040088","https://openalex.org/W2594726310","https://openalex.org/W2355193834","https://openalex.org/W2907597838"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-02-06T02:01:19.302388","created_date":"2025-10-10T00:00:00"}
