{"id":"https://openalex.org/W4386001072","doi":"https://doi.org/10.1007/s10822-023-00513-5","title":"Conformational energies of reference organic molecules: benchmarking of common efficient computational methods against coupled cluster theory","display_name":"Conformational energies of reference organic molecules: benchmarking of common efficient computational methods against coupled cluster theory","publication_year":2023,"publication_date":"2023-08-19","ids":{"openalex":"https://openalex.org/W4386001072","doi":"https://doi.org/10.1007/s10822-023-00513-5","pmid":"https://pubmed.ncbi.nlm.nih.gov/37597063"},"language":"en","primary_location":{"id":"doi:10.1007/s10822-023-00513-5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10822-023-00513-5","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10822-023-00513-5.pdf","source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s10822-023-00513-5.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113784960","display_name":"Ioannis Stylianakis","orcid":null},"institutions":[{"id":"https://openalex.org/I200777214","display_name":"National and Kapodistrian University of Athens","ror":"https://ror.org/04gnjpq42","country_code":"GR","type":"education","lineage":["https://openalex.org/I200777214"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Ioannis Stylianakis","raw_affiliation_strings":["Department of Medicinal Chemistry, Faculty of Pharmacy, National and Kapodistrian University of Athens, Panepistimioupolis Zografou, 15771, Athens, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicinal Chemistry, Faculty of Pharmacy, National and Kapodistrian University of Athens, Panepistimioupolis Zografou, 15771, Athens, Greece","institution_ids":["https://openalex.org/I200777214"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111513743","display_name":"Nikolaos Zervos","orcid":null},"institutions":[{"id":"https://openalex.org/I200777214","display_name":"National and Kapodistrian University of Athens","ror":"https://ror.org/04gnjpq42","country_code":"GR","type":"education","lineage":["https://openalex.org/I200777214"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Nikolaos Zervos","raw_affiliation_strings":["Department of Medicinal Chemistry, Faculty of Pharmacy, National and Kapodistrian University of Athens, Panepistimioupolis Zografou, 15771, Athens, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicinal Chemistry, Faculty of Pharmacy, National and Kapodistrian University of Athens, Panepistimioupolis Zografou, 15771, Athens, Greece","institution_ids":["https://openalex.org/I200777214"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028205690","display_name":"Jenn\u2010Huei Lii","orcid":null},"institutions":[{"id":"https://openalex.org/I70522481","display_name":"National Changhua University of Education","ror":"https://ror.org/005gkfa10","country_code":"TW","type":"education","lineage":["https://openalex.org/I70522481"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Jenn-Huei Lii","raw_affiliation_strings":["Department of Chemistry, National Changhua University of Education, Changhua City, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Chemistry, National Changhua University of Education, Changhua City, Taiwan","institution_ids":["https://openalex.org/I70522481"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008511927","display_name":"Dimitrios A. Pantazis","orcid":"https://orcid.org/0000-0002-2146-9065"},"institutions":[{"id":"https://openalex.org/I4210090782","display_name":"Max-Planck-Institut f\u00fcr Kohlenforschung","ror":"https://ror.org/00a7vgh58","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210090782"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Dimitrios A. Pantazis","raw_affiliation_strings":["Max-Planck-Institut f\u00fcr Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470, M\u00fclheim an der Ruhr, Germany"],"raw_orcid":"https://orcid.org/0000-0002-2146-9065","affiliations":[{"raw_affiliation_string":"Max-Planck-Institut f\u00fcr Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470, M\u00fclheim an der Ruhr, Germany","institution_ids":["https://openalex.org/I4210090782"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081215916","display_name":"Antonios Kolocouris","orcid":"https://orcid.org/0000-0001-6110-1903"},"institutions":[{"id":"https://openalex.org/I200777214","display_name":"National and Kapodistrian University of Athens","ror":"https://ror.org/04gnjpq42","country_code":"GR","type":"education","lineage":["https://openalex.org/I200777214"]}],"countries":["GR"],"is_corresponding":true,"raw_author_name":"Antonios Kolocouris","raw_affiliation_strings":["Department of Medicinal Chemistry, Faculty of Pharmacy, National and Kapodistrian University of Athens, Panepistimioupolis Zografou, 15771, Athens, Greece. ankol@pharm.uoa.gr","Laboratory of Medicinal Chemistry, Section of Pharmaceutical Chemistry, Department of Pharmacy, National and Kapodistrian University of Athens, Panepistimiopolis-Zografou, 15771, Athens, Greece. ankol@pharm.uoa.gr","Laboratory of Medicinal Chemistry, Section of Pharmaceutical Chemistry, Department of Pharmacy, National and Kapodistrian University of Athens, Panepistimiopolis-Zografou, 15771, Athens, Greece"],"raw_orcid":"https://orcid.org/0000-0001-6110-1903","affiliations":[{"raw_affiliation_string":"Department of Medicinal Chemistry, Faculty of Pharmacy, National and Kapodistrian University of Athens, Panepistimioupolis Zografou, 15771, Athens, Greece. ankol@pharm.uoa.gr","institution_ids":["https://openalex.org/I200777214"]},{"raw_affiliation_string":"Laboratory of Medicinal Chemistry, Section of Pharmaceutical Chemistry, Department of Pharmacy, National and Kapodistrian University of Athens, Panepistimiopolis-Zografou, 15771, Athens, Greece. ankol@pharm.uoa.gr","institution_ids":["https://openalex.org/I200777214"]},{"raw_affiliation_string":"Laboratory of Medicinal Chemistry, Section of Pharmaceutical Chemistry, Department of Pharmacy, National and Kapodistrian University of Athens, Panepistimiopolis-Zografou, 15771, Athens, Greece","institution_ids":["https://openalex.org/I200777214"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5081215916"],"corresponding_institution_ids":["https://openalex.org/I200777214"],"apc_list":{"value":2890,"currency":"EUR","value_usd":3690},"apc_paid":{"value":2890,"currency":"EUR","value_usd":3690},"fwci":2.1738,"has_fulltext":true,"cited_by_count":15,"citation_normalized_percentile":{"value":0.89620943,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"37","issue":"12","first_page":"607","last_page":"656"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13013","display_name":"Free Radicals and Antioxidants","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12893","display_name":"Organic Chemistry Cycloaddition Reactions","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/coupled-cluster","display_name":"Coupled cluster","score":0.7287794351577759},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.6744207739830017},{"id":"https://openalex.org/keywords/force-field","display_name":"Force field (fiction)","score":0.6100447177886963},{"id":"https://openalex.org/keywords/ab-initio","display_name":"Ab initio","score":0.5815265774726868},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.5769987106323242},{"id":"https://openalex.org/keywords/molecule","display_name":"Molecule","score":0.5389742255210876},{"id":"https://openalex.org/keywords/density-functional-theory","display_name":"Density functional theory","score":0.5306631326675415},{"id":"https://openalex.org/keywords/conformational-isomerism","display_name":"Conformational isomerism","score":0.5114266276359558},{"id":"https://openalex.org/keywords/steric-effects","display_name":"Steric effects","score":0.4900921583175659},{"id":"https://openalex.org/keywords/basis-set","display_name":"Basis set","score":0.46105706691741943},{"id":"https://openalex.org/keywords/stereochemistry","display_name":"Stereochemistry","score":0.1844089925289154},{"id":"https://openalex.org/keywords/organic-chemistry","display_name":"Organic chemistry","score":0.14852547645568848},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.14105871319770813},{"id":"https://openalex.org/keywords/quantum-mechanics","display_name":"Quantum mechanics","score":0.10217496752738953}],"concepts":[{"id":"https://openalex.org/C19637589","wikidata":"https://www.wikidata.org/wiki/Q1117940","display_name":"Coupled cluster","level":3,"score":0.7287794351577759},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.6744207739830017},{"id":"https://openalex.org/C10803110","wikidata":"https://www.wikidata.org/wiki/Q1341441","display_name":"Force field (fiction)","level":2,"score":0.6100447177886963},{"id":"https://openalex.org/C2781442258","wikidata":"https://www.wikidata.org/wiki/Q46310","display_name":"Ab initio","level":2,"score":0.5815265774726868},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.5769987106323242},{"id":"https://openalex.org/C32909587","wikidata":"https://www.wikidata.org/wiki/Q11369","display_name":"Molecule","level":2,"score":0.5389742255210876},{"id":"https://openalex.org/C152365726","wikidata":"https://www.wikidata.org/wiki/Q1048589","display_name":"Density functional theory","level":2,"score":0.5306631326675415},{"id":"https://openalex.org/C18705241","wikidata":"https://www.wikidata.org/wiki/Q1128023","display_name":"Conformational isomerism","level":3,"score":0.5114266276359558},{"id":"https://openalex.org/C201194858","wikidata":"https://www.wikidata.org/wiki/Q898238","display_name":"Steric effects","level":2,"score":0.4900921583175659},{"id":"https://openalex.org/C65956243","wikidata":"https://www.wikidata.org/wiki/Q2664086","display_name":"Basis set","level":3,"score":0.46105706691741943},{"id":"https://openalex.org/C71240020","wikidata":"https://www.wikidata.org/wiki/Q186011","display_name":"Stereochemistry","level":1,"score":0.1844089925289154},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.14852547645568848},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.14105871319770813},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.10217496752738953}],"mesh":[{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055585","descriptor_name":"Physical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055585","descriptor_name":"Physical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055585","descriptor_name":"Physical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1007/s10822-023-00513-5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10822-023-00513-5","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10822-023-00513-5.pdf","source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},{"id":"pmid:37597063","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37597063","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of computer-aided molecular design","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10618395","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10618395","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10618395/pdf/10822_2023_Article_513.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Comput Aided Mol Des","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1007/s10822-023-00513-5","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10822-023-00513-5","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10822-023-00513-5.pdf","source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323149","display_name":"National and Kapodistrian University of Athens","ror":"https://ror.org/04gnjpq42"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4386001072.pdf"},"referenced_works_count":380,"referenced_works":["https://openalex.org/W175686053","https://openalex.org/W1168948306","https://openalex.org/W1574356778","https://openalex.org/W1576629359","https://openalex.org/W1653739410","https://openalex.org/W1823686987","https://openalex.org/W1852505583","https://openalex.org/W1900603978","https://openalex.org/W1963603031","https://openalex.org/W1965420581","https://openalex.org/W1966368470","https://openalex.org/W1967137790","https://openalex.org/W1968103541","https://openalex.org/W1968184219","https://openalex.org/W1968189395","https://openalex.org/W1968712607","https://openalex.org/W1969360947","https://openalex.org/W1969894411","https://openalex.org/W1969956396","https://openalex.org/W1970426887","https://openalex.org/W1971489419","https://openalex.org/W1972344211","https://openalex.org/W1974374778","https://openalex.org/W1976100645","https://openalex.org/W1976230769","https://openalex.org/W1976530475","https://openalex.org/W1976631437","https://openalex.org/W1976848779","https://openalex.org/W1977450199","https://openalex.org/W1977793243","https://openalex.org/W1977934877","https://openalex.org/W1979101689","https://openalex.org/W1983194490","https://openalex.org/W1983200998","https://openalex.org/W1984440764","https://openalex.org/W1985259981","https://openalex.org/W1985856531","https://openalex.org/W1986240377","https://openalex.org/W1987067390","https://openalex.org/W1988194520","https://openalex.org/W1988257498","https://openalex.org/W1990011877","https://openalex.org/W1991299140","https://openalex.org/W1992401582","https://openalex.org/W1992675226","https://openalex.org/W1992961585","https://openalex.org/W1993831022","https://openalex.org/W1993845951","https://openalex.org/W1993890897","https://openalex.org/W1994240164","https://openalex.org/W1994629201","https://openalex.org/W1994690562","https://openalex.org/W1994765918","https://openalex.org/W1995726113","https://openalex.org/W1995850373","https://openalex.org/W1995968169","https://openalex.org/W1998070977","https://openalex.org/W1998513778","https://openalex.org/W1998689733","https://openalex.org/W1998826257","https://openalex.org/W2001036491","https://openalex.org/W2001291135","https://openalex.org/W2001967484","https://openalex.org/W2002562877","https://openalex.org/W2003859819","https://openalex.org/W2004051381","https://openalex.org/W2004105351","https://openalex.org/W2004362313","https://openalex.org/W2004819869","https://openalex.org/W2005540985","https://openalex.org/W2005586076","https://openalex.org/W2005879436","https://openalex.org/W2006336469","https://openalex.org/W2006609984","https://openalex.org/W2006670483","https://openalex.org/W2007202750","https://openalex.org/W2008017917","https://openalex.org/W2008456325","https://openalex.org/W2009014328","https://openalex.org/W2011268996","https://openalex.org/W2012028794","https://openalex.org/W2012460834","https://openalex.org/W2012985514","https://openalex.org/W2013008150","https://openalex.org/W2014636641","https://openalex.org/W2016023215","https://openalex.org/W2016113715","https://openalex.org/W2017172946","https://openalex.org/W2017865129","https://openalex.org/W2018063861","https://openalex.org/W2018674598","https://openalex.org/W2019511807","https://openalex.org/W2019658651","https://openalex.org/W2019830511","https://openalex.org/W2019878904","https://openalex.org/W2020113503","https://openalex.org/W2020463782","https://openalex.org/W2020653910","https://openalex.org/W2021645884","https://openalex.org/W2021738530","https://openalex.org/W2021757060","https://openalex.org/W2022134241","https://openalex.org/W2022467627","https://openalex.org/W2022896677","https://openalex.org/W2023012927","https://openalex.org/W2023023876","https://openalex.org/W2023590410","https://openalex.org/W2024311391","https://openalex.org/W2024693795","https://openalex.org/W2025704861","https://openalex.org/W2025874194","https://openalex.org/W2027433232","https://openalex.org/W2028016303","https://openalex.org/W2028523928","https://openalex.org/W2028677849","https://openalex.org/W2029768476","https://openalex.org/W2030182790","https://openalex.org/W2030305709","https://openalex.org/W2030575251","https://openalex.org/W2030833223","https://openalex.org/W2030971064","https://openalex.org/W2031200077","https://openalex.org/W2031714830","https://openalex.org/W2031904668","https://openalex.org/W2032211023","https://openalex.org/W2032360963","https://openalex.org/W2032842297","https://openalex.org/W2033043377","https://openalex.org/W2034426506","https://openalex.org/W2036000433","https://openalex.org/W2037398582","https://openalex.org/W2038279690","https://openalex.org/W2038425418","https://openalex.org/W2038966841","https://openalex.org/W2039701562","https://openalex.org/W2039709045","https://openalex.org/W2040452006","https://openalex.org/W2040930624","https://openalex.org/W2041587408","https://openalex.org/W2042439230","https://openalex.org/W2043010558","https://openalex.org/W2043389078","https://openalex.org/W2043851669","https://openalex.org/W2044015855","https://openalex.org/W2044242047","https://openalex.org/W2044315442","https://openalex.org/W2045466163","https://openalex.org/W2046973061","https://openalex.org/W2047600606","https://openalex.org/W2047606616","https://openalex.org/W2047663863","https://openalex.org/W2047669290","https://openalex.org/W2049864289","https://openalex.org/W2050456292","https://openalex.org/W2051316029","https://openalex.org/W2051684377","https://openalex.org/W2051707493","https://openalex.org/W2053028093","https://openalex.org/W2053825703","https://openalex.org/W2054881399","https://openalex.org/W2054918668","https://openalex.org/W2055502338","https://openalex.org/W2056461723","https://openalex.org/W2056517223","https://openalex.org/W2057491831","https://openalex.org/W2057539772","https://openalex.org/W2057627954","https://openalex.org/W2058534171","https://openalex.org/W2059442754","https://openalex.org/W2061165490","https://openalex.org/W2061562862","https://openalex.org/W2062214204","https://openalex.org/W2063337298","https://openalex.org/W2063525826","https://openalex.org/W2063533086","https://openalex.org/W2064798852","https://openalex.org/W2064896808","https://openalex.org/W2065391920","https://openalex.org/W2066070693","https://openalex.org/W2066245380","https://openalex.org/W2066470963","https://openalex.org/W2067194595","https://openalex.org/W2067299045","https://openalex.org/W2067959662","https://openalex.org/W2069006374","https://openalex.org/W2069010397","https://openalex.org/W2070102782","https://openalex.org/W2070753604","https://openalex.org/W2071013719","https://openalex.org/W2071076123","https://openalex.org/W2071088013","https://openalex.org/W2071281986","https://openalex.org/W2071373594","https://openalex.org/W2073553766","https://openalex.org/W2074783686","https://openalex.org/W2075363524","https://openalex.org/W2075654185","https://openalex.org/W2075870896","https://openalex.org/W2076217060","https://openalex.org/W2076281355","https://openalex.org/W2076772212","https://openalex.org/W2076861180","https://openalex.org/W2077103467","https://openalex.org/W2077368862","https://openalex.org/W2077663334","https://openalex.org/W2078374001","https://openalex.org/W2078511427","https://openalex.org/W2079149948","https://openalex.org/W2079827358","https://openalex.org/W2079857253","https://openalex.org/W2080510802","https://openalex.org/W2080576373","https://openalex.org/W2080887827","https://openalex.org/W2082129470","https://openalex.org/W2082179063","https://openalex.org/W2083365344","https://openalex.org/W2083804397","https://openalex.org/W2084439948","https://openalex.org/W2084965106","https://openalex.org/W2085335132","https://openalex.org/W2085822586","https://openalex.org/W2086106287","https://openalex.org/W2086386139","https://openalex.org/W2086896871","https://openalex.org/W2089486042","https://openalex.org/W2089893302","https://openalex.org/W2089957679","https://openalex.org/W2090431249","https://openalex.org/W2090663866","https://openalex.org/W2090669391","https://openalex.org/W2090714781","https://openalex.org/W2091529431","https://openalex.org/W2092144837","https://openalex.org/W2092157292","https://openalex.org/W2092340089","https://openalex.org/W2094180775","https://openalex.org/W2094514835","https://openalex.org/W2095026430","https://openalex.org/W2095044261","https://openalex.org/W2095255995","https://openalex.org/W2096541451","https://openalex.org/W2099224862","https://openalex.org/W2102887337","https://openalex.org/W2104731404","https://openalex.org/W2104929187","https://openalex.org/W2109225217","https://openalex.org/W2110651918","https://openalex.org/W2111796195","https://openalex.org/W2112937261","https://openalex.org/W2114030802","https://openalex.org/W2114704115","https://openalex.org/W2130273043","https://openalex.org/W2130479394","https://openalex.org/W2130783395","https://openalex.org/W2131124255","https://openalex.org/W2133416026","https://openalex.org/W2134670420","https://openalex.org/W2136623753","https://openalex.org/W2138845770","https://openalex.org/W2139548259","https://openalex.org/W2144030809","https://openalex.org/W2144305938","https://openalex.org/W2144350761","https://openalex.org/W2147421370","https://openalex.org/W2147774409","https://openalex.org/W2151698021","https://openalex.org/W2152903006","https://openalex.org/W2154766172","https://openalex.org/W2155430111","https://openalex.org/W2157644664","https://openalex.org/W2158219301","https://openalex.org/W2162913994","https://openalex.org/W2166114438","https://openalex.org/W2169333928","https://openalex.org/W2169564659","https://openalex.org/W2169678694","https://openalex.org/W2202461091","https://openalex.org/W2244785476","https://openalex.org/W2260174460","https://openalex.org/W2261529249","https://openalex.org/W2313674236","https://openalex.org/W2314392329","https://openalex.org/W2315777075","https://openalex.org/W2317333778","https://openalex.org/W2317932190","https://openalex.org/W2318304331","https://openalex.org/W2318775199","https://openalex.org/W2322715912","https://openalex.org/W2323731354","https://openalex.org/W2324822098","https://openalex.org/W2326253274","https://openalex.org/W2327788563","https://openalex.org/W2328341611","https://openalex.org/W2328899820","https://openalex.org/W2337121946","https://openalex.org/W2425304625","https://openalex.org/W2525399233","https://openalex.org/W2557113729","https://openalex.org/W2561728565","https://openalex.org/W2587816047","https://openalex.org/W2610714212","https://openalex.org/W2613133334","https://openalex.org/W2726184500","https://openalex.org/W2739211744","https://openalex.org/W2739439285","https://openalex.org/W2740674013","https://openalex.org/W2761786744","https://openalex.org/W2774338017","https://openalex.org/W2783279211","https://openalex.org/W2783295583","https://openalex.org/W2783449509","https://openalex.org/W2783856220","https://openalex.org/W2788703071","https://openalex.org/W2789803372","https://openalex.org/W2790489686","https://openalex.org/W2796166544","https://openalex.org/W2799836947","https://openalex.org/W2800168263","https://openalex.org/W2805726733","https://openalex.org/W2908590955","https://openalex.org/W2912640400","https://openalex.org/W2915764133","https://openalex.org/W2916848576","https://openalex.org/W2931367569","https://openalex.org/W2938625151","https://openalex.org/W2945820429","https://openalex.org/W2947658954","https://openalex.org/W2949258342","https://openalex.org/W2950253187","https://openalex.org/W2950600705","https://openalex.org/W2950664211","https://openalex.org/W2951669052","https://openalex.org/W2952035915","https://openalex.org/W2952554548","https://openalex.org/W2952601542","https://openalex.org/W2955551200","https://openalex.org/W2960562179","https://openalex.org/W2964841466","https://openalex.org/W2977274025","https://openalex.org/W2981205241","https://openalex.org/W2995638684","https://openalex.org/W2999816439","https://openalex.org/W2999963133","https://openalex.org/W3001716486","https://openalex.org/W3004969213","https://openalex.org/W3005227064","https://openalex.org/W3005465209","https://openalex.org/W3024420576","https://openalex.org/W3033793118","https://openalex.org/W3034390843","https://openalex.org/W3038008928","https://openalex.org/W3041598154","https://openalex.org/W3048848973","https://openalex.org/W3083957614","https://openalex.org/W3093527908","https://openalex.org/W3094367338","https://openalex.org/W3094671690","https://openalex.org/W3105259638","https://openalex.org/W3111668048","https://openalex.org/W3126239765","https://openalex.org/W3126732720","https://openalex.org/W3135320558","https://openalex.org/W3135980978","https://openalex.org/W3185212322","https://openalex.org/W3192324432","https://openalex.org/W3195169466","https://openalex.org/W3217615948","https://openalex.org/W4210521021","https://openalex.org/W4210957867","https://openalex.org/W4214593781","https://openalex.org/W4224239642","https://openalex.org/W4229739843","https://openalex.org/W4235715895","https://openalex.org/W4237161656","https://openalex.org/W4237763137","https://openalex.org/W4240035468","https://openalex.org/W4247340517","https://openalex.org/W4280529400","https://openalex.org/W4282053982","https://openalex.org/W4376453925"],"related_works":["https://openalex.org/W2017082684","https://openalex.org/W2085733928","https://openalex.org/W2085271587","https://openalex.org/W1998004681","https://openalex.org/W2072016216","https://openalex.org/W2072108342","https://openalex.org/W3013683052","https://openalex.org/W4294991667","https://openalex.org/W1995363368","https://openalex.org/W2391822045"],"abstract_inverted_index":{"Abstract":[0],"We":[1,16,129],"selected":[2],"145":[3],"reference":[4,108,201,220],"organic":[5,44,115,139,333],"molecules":[6,116,140,334],"that":[7,151,198],"include":[8],"model":[9,138,332],"fragments":[10,341],"used":[11,105,336],"in":[12,29,131,185,342],"computer-aided":[13],"drug":[14,186],"design.":[15],"calculated":[17,167,222,347],"158":[18],"conformational":[19,41,134],"energies":[20,42],"and":[21,31,34,49,64,91,122,126,148,159,166,210,238,274,285,297,304,318,359],"barriers":[22],"using":[23,205,348],"force":[24,51,55,68,250,260,278,325,362],"fields,":[25,52,251],"with":[26,76,102],"wide":[27],"applicability":[28],"commercial":[30],"free":[32],"softwares":[33],"extensive":[35],"application":[36],"on":[37,171],"the":[38,47,53,60,66,80,86,92,103,114,133,142,146,153,160,172,176,218,239,249,252,258,275,288,328],"calculation":[39],"of":[40,43,113,136,145,155,178,180,208],"molecules,":[45],"e.g.":[46],"UFF":[48,319],"DREIDING":[50,312],"Allinger\u2019s":[54,259],"fields":[56,261,326],"MM3-96,":[57],"MM3-00,":[58],"MM4-8,":[59],"MM2-91":[61,289],"clones":[62,290],"MMX":[63,291],"MM+,":[65],"MMFF94":[67,277],"field,":[69],"MM4,":[70],"ab":[71],"initio":[72],"Hartree\u2013Fock":[73],"(HF)":[74],"theory":[75,84,90],"different":[77,211],"basis":[78],"sets,":[79],"standard":[81],"density":[82],"functional":[83],"B3LYP,":[85],"second-order":[87],"post-HF":[88],"MP2":[89,224],"Domain-based":[93],"Local":[94],"Pair":[95],"Natural":[96],"Orbital":[97],"Coupled":[98],"Cluster":[99],"DLPNO-CCSD(T)":[100,219,349],"theory,":[101],"latter":[104],"for":[106,182,223,257,287,356,360],"accurate":[107],"values.":[109],"The":[110,213,311,345],"data":[111,354],"set":[112,355],"includes":[117],"hydrocarbons,":[118],"haloalkanes,":[119],"conjugated":[120],"compounds,":[121],"oxygen-,":[123],"nitrogen-,":[124],"phosphorus-":[125],"sulphur-containing":[127],"compounds.":[128],"reviewed":[130],"detail":[132],"aspects":[135],"these":[137],"providing":[141],"current":[143],"understanding":[144],"steric":[147],"electronic":[149],"factors":[150],"determine":[152],"stability":[154],"low":[156],"energy":[157],"conformers":[158],"literature":[161],"including":[162],"previous":[163,195],"experimental":[164,203],"observations":[165],"findings.":[168],"While":[169],"progress":[170],"computer":[173],"hardware":[174],"allows":[175],"calculations":[177],"thousands":[179],"conformations":[181],"later":[183],"use":[184],"design":[187],"projects,":[188],"this":[189],"study":[190],"is":[191],"an":[192],"update":[193],"from":[194],"classical":[196],"studies":[197],"used,":[199],"as":[200,340],"values,":[202],"ones":[204],"a":[206,352],"variety":[207],"methods":[209],"environments.":[212],"lowest":[214,253,329],"mean":[215],"error":[216],"against":[217],"was":[221],"(0.35":[225],"kcal":[226,234,243,264,270,281,293,300,307,314,321],"mol":[227,235,244,265,271,282,294,301,308,315,322],"\u22121":[228,236,245,266,272,283,295,302,309,316,323],"),":[229,267],"followed":[230],"by":[231],"B3LYP":[232],"(0.69":[233],")":[237,273,284,296,303,317,324],"HF":[240],"theories":[241],"(0.81\u20131.0":[242],").":[246,310],"As":[247],"regards":[248],"errors":[254],"were":[255],"observed":[256],"MM3-00":[262],"(1.28":[263],"\u039c\u039c3-96":[268],"(1.40":[269],"Halgren\u2019s":[276],"field":[279,363],"(1.30":[280],"then":[286],"(1.77":[292],"MM+":[298],"(2.01":[299],"MM4":[305],"(2.05":[306],"(3.63":[313],"(3.77":[320],"have":[327],"performance.":[330],"These":[331],"we":[335],"are":[337],"often":[338],"present":[339],"drug-like":[343],"molecules.":[344],"values":[346],"make":[350],"up":[351],"valuable":[353],"further":[357],"comparisons":[358],"improved":[361],"parameterization.":[364],"Graphical":[365],"abstract":[366]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
