{"id":"https://openalex.org/W4307338327","doi":"https://doi.org/10.1007/s10822-022-00476-z","title":"Improved prediction and characterization of blood-brain barrier penetrating peptides using estimated propensity scores of dipeptides","display_name":"Improved prediction and characterization of blood-brain barrier penetrating peptides using estimated propensity scores of dipeptides","publication_year":2022,"publication_date":"2022-10-26","ids":{"openalex":"https://openalex.org/W4307338327","doi":"https://doi.org/10.1007/s10822-022-00476-z","pmid":"https://pubmed.ncbi.nlm.nih.gov/36284036"},"language":"en","primary_location":{"id":"doi:10.1007/s10822-022-00476-z","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-022-00476-z","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037914988","display_name":"Phasit Charoenkwan","orcid":"https://orcid.org/0000-0002-8161-6856"},"institutions":[{"id":"https://openalex.org/I48076826","display_name":"Chiang Mai University","ror":"https://ror.org/05m2fqn25","country_code":"TH","type":"education","lineage":["https://openalex.org/I48076826"]}],"countries":["TH"],"is_corresponding":false,"raw_author_name":"Phasit Charoenkwan","raw_affiliation_strings":["Modern Management and Information Technology, College of Arts, Media and Technology, Chiang Mai University, 50200, Chiang Mai, Thailand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Modern Management and Information Technology, College of Arts, Media and Technology, Chiang Mai University, 50200, Chiang Mai, Thailand","institution_ids":["https://openalex.org/I48076826"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029581300","display_name":"Pramote Chumnanpuen","orcid":"https://orcid.org/0000-0003-3072-1733"},"institutions":[{"id":"https://openalex.org/I198105771","display_name":"Kasetsart University","ror":"https://ror.org/05gzceg21","country_code":"TH","type":"education","lineage":["https://openalex.org/I198105771"]}],"countries":["TH"],"is_corresponding":false,"raw_author_name":"Pramote Chumnanpuen","raw_affiliation_strings":["Department of Zoology, Faculty of Science, Kasetsart University, 10900, Bangkok, Thailand","Omics Center for Agriculture, Bioresources, Food, and Health, Kasetsart University (OmiKU), 10900, Bangkok, Thailand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Zoology, Faculty of Science, Kasetsart University, 10900, Bangkok, Thailand","institution_ids":["https://openalex.org/I198105771"]},{"raw_affiliation_string":"Omics Center for Agriculture, Bioresources, Food, and Health, Kasetsart University (OmiKU), 10900, Bangkok, Thailand","institution_ids":["https://openalex.org/I198105771"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069155677","display_name":"Nalini Schaduangrat","orcid":"https://orcid.org/0000-0002-0842-8277"},"institutions":[{"id":"https://openalex.org/I25399158","display_name":"Mahidol University","ror":"https://ror.org/01znkr924","country_code":"TH","type":"education","lineage":["https://openalex.org/I25399158"]}],"countries":["TH"],"is_corresponding":false,"raw_author_name":"Nalini Schaduangrat","raw_affiliation_strings":["Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, 10700, Bangkok, Thailand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, 10700, Bangkok, Thailand","institution_ids":["https://openalex.org/I25399158"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056748708","display_name":"P\u00edetro Li\u00f3","orcid":"https://orcid.org/0000-0002-0540-5053"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Pietro Lio\u2019","raw_affiliation_strings":["Department of Computer Science and Technology, University of Cambridge, CB3 0FD, Cambridge, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, University of Cambridge, CB3 0FD, Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034828056","display_name":"Mohammad Ali Moni","orcid":"https://orcid.org/0000-0003-0756-1006"},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]},{"id":"https://openalex.org/I4387155886","display_name":"Digital Health Cooperative Research Centre","ror":"https://ror.org/02n8xct56","country_code":null,"type":"company","lineage":["https://openalex.org/I4387155886"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Mohammad Ali Moni","raw_affiliation_strings":["Artificial Intelligence &amp; Digital Health Data Science, School of Health and Rehabilitation Sciences, Faculty of Health and Behavioural Sciences, The University of Queensland, 4072, St Lucia, QLD, Australia","Artificial Intelligence & Digital Health Data Science, School of Health and Rehabilitation Sciences, Faculty of Health and Behavioural Sciences, The University of Queensland, 4072, St Lucia, QLD, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Artificial Intelligence &amp; Digital Health Data Science, School of Health and Rehabilitation Sciences, Faculty of Health and Behavioural Sciences, The University of Queensland, 4072, St Lucia, QLD, Australia","institution_ids":["https://openalex.org/I165143802"]},{"raw_affiliation_string":"Artificial Intelligence & Digital Health Data Science, School of Health and Rehabilitation Sciences, Faculty of Health and Behavioural Sciences, The University of Queensland, 4072, St Lucia, QLD, Australia","institution_ids":["https://openalex.org/I165143802","https://openalex.org/I4387155886"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084444175","display_name":"Watshara Shoombuatong","orcid":"https://orcid.org/0000-0002-3394-8709"},"institutions":[{"id":"https://openalex.org/I25399158","display_name":"Mahidol University","ror":"https://ror.org/01znkr924","country_code":"TH","type":"education","lineage":["https://openalex.org/I25399158"]}],"countries":["TH"],"is_corresponding":true,"raw_author_name":"Watshara Shoombuatong","raw_affiliation_strings":["Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, 10700, Bangkok, Thailand. watshara.sho@mahidol.ac.th","Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, 10700, Bangkok, Thailand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, 10700, Bangkok, Thailand. watshara.sho@mahidol.ac.th","institution_ids":["https://openalex.org/I25399158"]},{"raw_affiliation_string":"Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, 10700, Bangkok, Thailand","institution_ids":["https://openalex.org/I25399158"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5084444175"],"corresponding_institution_ids":["https://openalex.org/I25399158"],"apc_list":{"value":2890,"currency":"EUR","value_usd":3690},"apc_paid":null,"fwci":1.9924,"has_fulltext":false,"cited_by_count":30,"citation_normalized_percentile":{"value":0.87189504,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"36","issue":"11","first_page":"781","last_page":"796"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10725","display_name":"RNA Interference and Gene Delivery","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.8028926849365234},{"id":"https://openalex.org/keywords/blood\u2013brain-barrier","display_name":"Blood\u2013brain barrier","score":0.6956096887588501},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6139205694198608},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6106405258178711},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.49825501441955566},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.4979667663574219},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.48198336362838745},{"id":"https://openalex.org/keywords/central-nervous-system","display_name":"Central nervous system","score":0.24343019723892212},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.23673281073570251},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15801984071731567}],"concepts":[{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.8028926849365234},{"id":"https://openalex.org/C2778402981","wikidata":"https://www.wikidata.org/wiki/Q221694","display_name":"Blood\u2013brain barrier","level":3,"score":0.6956096887588501},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6139205694198608},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6106405258178711},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.49825501441955566},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.4979667663574219},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.48198336362838745},{"id":"https://openalex.org/C529278444","wikidata":"https://www.wikidata.org/wiki/Q47273","display_name":"Central nervous system","level":2,"score":0.24343019723892212},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.23673281073570251},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15801984071731567},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D001812","descriptor_name":"Blood-Brain Barrier","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001812","descriptor_name":"Blood-Brain Barrier","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001812","descriptor_name":"Blood-Brain Barrier","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004151","descriptor_name":"Dipeptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004151","descriptor_name":"Dipeptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004151","descriptor_name":"Dipeptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004151","descriptor_name":"Dipeptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D004151","descriptor_name":"Dipeptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D004151","descriptor_name":"Dipeptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D042783","descriptor_name":"Endothelial Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D042783","descriptor_name":"Endothelial Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D042783","descriptor_name":"Endothelial Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057216","descriptor_name":"Propensity Score","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057216","descriptor_name":"Propensity Score","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057216","descriptor_name":"Propensity Score","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1007/s10822-022-00476-z","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-022-00476-z","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},{"id":"pmid:36284036","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36284036","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of computer-aided molecular design","raw_type":null},{"id":"pmh:oai:iris.uniroma1.it:11573/1724045","is_oa":false,"landing_page_url":"https://hdl.handle.net/11573/1724045","pdf_url":null,"source":{"id":"https://openalex.org/S4377196107","display_name":"IRIS Research product catalog (Sapienza University of Rome)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5099999904632568,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321529","display_name":"Chiang Mai University","ror":"https://ror.org/05m2fqn25"},{"id":"https://openalex.org/F4320322401","display_name":"Mahidol University","ror":"https://ror.org/01znkr924"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":89,"referenced_works":["https://openalex.org/W58245324","https://openalex.org/W81414290","https://openalex.org/W1839850369","https://openalex.org/W1867690705","https://openalex.org/W1889312334","https://openalex.org/W1976223354","https://openalex.org/W1978948741","https://openalex.org/W1980516919","https://openalex.org/W1983472437","https://openalex.org/W1984434100","https://openalex.org/W1986129921","https://openalex.org/W1986299453","https://openalex.org/W1987474880","https://openalex.org/W1990060072","https://openalex.org/W1993125234","https://openalex.org/W1995318118","https://openalex.org/W1995518628","https://openalex.org/W2000028953","https://openalex.org/W2000794581","https://openalex.org/W2042517193","https://openalex.org/W2052706007","https://openalex.org/W2062849515","https://openalex.org/W2076498053","https://openalex.org/W2092485312","https://openalex.org/W2095588466","https://openalex.org/W2101234009","https://openalex.org/W2117459976","https://openalex.org/W2117586459","https://openalex.org/W2119423166","https://openalex.org/W2134344823","https://openalex.org/W2138608577","https://openalex.org/W2141007997","https://openalex.org/W2141062474","https://openalex.org/W2144877918","https://openalex.org/W2151448282","https://openalex.org/W2155881411","https://openalex.org/W2159821105","https://openalex.org/W2167445067","https://openalex.org/W2170483670","https://openalex.org/W2171639300","https://openalex.org/W2200232771","https://openalex.org/W2315341171","https://openalex.org/W2318921982","https://openalex.org/W2332117191","https://openalex.org/W2398245217","https://openalex.org/W2412145118","https://openalex.org/W2472351724","https://openalex.org/W2485511807","https://openalex.org/W2552080741","https://openalex.org/W2565115450","https://openalex.org/W2736085010","https://openalex.org/W2754967293","https://openalex.org/W2791631250","https://openalex.org/W2803202079","https://openalex.org/W2889843959","https://openalex.org/W2898088347","https://openalex.org/W2901573777","https://openalex.org/W2901754076","https://openalex.org/W2910591656","https://openalex.org/W2936599975","https://openalex.org/W2944021362","https://openalex.org/W2979762545","https://openalex.org/W2981438385","https://openalex.org/W2981679558","https://openalex.org/W3003285614","https://openalex.org/W3013552211","https://openalex.org/W3017630416","https://openalex.org/W3084375074","https://openalex.org/W3090580446","https://openalex.org/W3093729849","https://openalex.org/W3094567318","https://openalex.org/W3112172360","https://openalex.org/W3119003488","https://openalex.org/W3121559085","https://openalex.org/W3127712659","https://openalex.org/W3131121088","https://openalex.org/W3137914727","https://openalex.org/W3159193120","https://openalex.org/W3181450985","https://openalex.org/W3190208036","https://openalex.org/W3194080364","https://openalex.org/W3205925781","https://openalex.org/W3209496151","https://openalex.org/W4200003503","https://openalex.org/W4200115265","https://openalex.org/W4220769588","https://openalex.org/W4245992848","https://openalex.org/W4285248978","https://openalex.org/W6675354045"],"related_works":["https://openalex.org/W2905433371","https://openalex.org/W2888392564","https://openalex.org/W4310278675","https://openalex.org/W4388422664","https://openalex.org/W4390569940","https://openalex.org/W4361193272","https://openalex.org/W2963326959","https://openalex.org/W4388685194","https://openalex.org/W1986582023","https://openalex.org/W2966829450"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":4}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
