{"id":"https://openalex.org/W2888476333","doi":"https://doi.org/10.1007/s10822-018-0153-7","title":"Detailed potential of mean force studies on host\u2013guest systems from the SAMPL6 challenge","display_name":"Detailed potential of mean force studies on host\u2013guest systems from the SAMPL6 challenge","publication_year":2018,"publication_date":"2018-08-24","ids":{"openalex":"https://openalex.org/W2888476333","doi":"https://doi.org/10.1007/s10822-018-0153-7","mag":"2888476333","pmid":"https://pubmed.ncbi.nlm.nih.gov/30143917"},"language":"en","primary_location":{"id":"doi:10.1007/s10822-018-0153-7","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-018-0153-7","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044114823","display_name":"Lin Frank Song","orcid":"https://orcid.org/0000-0002-1854-5215"},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Lin Frank Song","raw_affiliation_strings":["Department of Chemistry and the Department of Biochemistry and Molecular Biology, Michigan State University, 578 S. Shaw Lane, East Lansing, MI, 48824, USA"],"affiliations":[{"raw_affiliation_string":"Department of Chemistry and the Department of Biochemistry and Molecular Biology, Michigan State University, 578 S. Shaw Lane, East Lansing, MI, 48824, USA","institution_ids":["https://openalex.org/I87216513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009751380","display_name":"Nupur Bansal","orcid":"https://orcid.org/0000-0003-3226-330X"},"institutions":[{"id":"https://openalex.org/I1297540436","display_name":"Biogen (United States)","ror":"https://ror.org/02jqkb192","country_code":"US","type":"company","lineage":["https://openalex.org/I1297540436"]},{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nupur Bansal","raw_affiliation_strings":["Biogen Inc., Cambridge, MA, 02142, USA","Department of Chemistry and the Department of Biochemistry and Molecular Biology, Michigan State University, 578 S. Shaw Lane, East Lansing, MI, 48824, USA"],"affiliations":[{"raw_affiliation_string":"Biogen Inc., Cambridge, MA, 02142, USA","institution_ids":["https://openalex.org/I1297540436"]},{"raw_affiliation_string":"Department of Chemistry and the Department of Biochemistry and Molecular Biology, Michigan State University, 578 S. Shaw Lane, East Lansing, MI, 48824, USA","institution_ids":["https://openalex.org/I87216513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100459070","display_name":"Zheng Zheng","orcid":"https://orcid.org/0000-0001-7661-6846"},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zheng Zheng","raw_affiliation_strings":["Department of Chemistry and the Department of Biochemistry and Molecular Biology, Michigan State University, 578 S. Shaw Lane, East Lansing, MI, 48824, USA"],"affiliations":[{"raw_affiliation_string":"Department of Chemistry and the Department of Biochemistry and Molecular Biology, Michigan State University, 578 S. Shaw Lane, East Lansing, MI, 48824, USA","institution_ids":["https://openalex.org/I87216513"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085994852","display_name":"Kenneth M. Merz","orcid":"https://orcid.org/0000-0001-9139-5893"},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kenneth M. Merz","raw_affiliation_strings":["Department of Chemistry and the Department of Biochemistry and Molecular Biology, Michigan State University, 578 S. Shaw Lane, East Lansing, MI, 48824, USA. kmerz1@gmail.com","Institute for Cyber Enabled Research, Michigan State University, 567 Wilson Road, Room 1440, East Lansing, MI, 48824, USA. kmerz1@gmail.com","Department of Chemistry and the Department of Biochemistry and Molecular Biology, Michigan State University, 578 S. Shaw Lane, East Lansing, MI, 48824, USA"],"affiliations":[{"raw_affiliation_string":"Department of Chemistry and the Department of Biochemistry and Molecular Biology, Michigan State University, 578 S. Shaw Lane, East Lansing, MI, 48824, USA. kmerz1@gmail.com","institution_ids":[]},{"raw_affiliation_string":"Institute for Cyber Enabled Research, Michigan State University, 567 Wilson Road, Room 1440, East Lansing, MI, 48824, USA. kmerz1@gmail.com","institution_ids":[]},{"raw_affiliation_string":"Department of Chemistry and the Department of Biochemistry and Molecular Biology, Michigan State University, 578 S. Shaw Lane, East Lansing, MI, 48824, USA","institution_ids":["https://openalex.org/I87216513"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5044114823"],"corresponding_institution_ids":["https://openalex.org/I87216513"],"apc_list":{"value":2890,"currency":"EUR","value_usd":3690},"apc_paid":null,"fwci":1.7611,"has_fulltext":false,"cited_by_count":22,"citation_normalized_percentile":{"value":0.85368706,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"32","issue":"10","first_page":"1013","last_page":"1026"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":0.9922999739646912,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11449","display_name":"Mechanical and Optical Resonators","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/3107","display_name":"Atomic and Molecular Physics, and Optics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.6533984541893005},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.34480035305023193},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23835018277168274},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.11162108182907104}],"concepts":[{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.6533984541893005},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.34480035305023193},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23835018277168274},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.11162108182907104}],"mesh":[{"descriptor_ui":"D000099246","descriptor_name":"Cucurbit(n)urils","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001952","descriptor_name":"Bridged-Ring Compounds","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D001952","descriptor_name":"Bridged-Ring Compounds","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D001952","descriptor_name":"Bridged-Ring Compounds","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002264","descriptor_name":"Carboxylic Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002264","descriptor_name":"Carboxylic Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002264","descriptor_name":"Carboxylic Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003516","descriptor_name":"Cycloparaffins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003516","descriptor_name":"Cycloparaffins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003516","descriptor_name":"Cycloparaffins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D007093","descriptor_name":"Imidazoles","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D007093","descriptor_name":"Imidazoles","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D007093","descriptor_name":"Imidazoles","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D013329","descriptor_name":"Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013329","descriptor_name":"Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013329","descriptor_name":"Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D047028","descriptor_name":"Macrocyclic Compounds","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D047028","descriptor_name":"Macrocyclic Compounds","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D047028","descriptor_name":"Macrocyclic Compounds","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D055585","descriptor_name":"Physical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055585","descriptor_name":"Physical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055585","descriptor_name":"Physical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1007/s10822-018-0153-7","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-018-0153-7","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},{"id":"pmid:30143917","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30143917","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of computer-aided molecular design","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1213825516","display_name":null,"funder_award_id":"GM112406","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":107,"referenced_works":["https://openalex.org/W57369924","https://openalex.org/W1507197149","https://openalex.org/W1625910593","https://openalex.org/W1963739311","https://openalex.org/W1965762256","https://openalex.org/W1968285218","https://openalex.org/W1968904047","https://openalex.org/W1970973025","https://openalex.org/W1971255156","https://openalex.org/W1975580333","https://openalex.org/W1976499671","https://openalex.org/W1977902160","https://openalex.org/W1978393297","https://openalex.org/W1984738107","https://openalex.org/W1984807385","https://openalex.org/W1985588649","https://openalex.org/W1989753444","https://openalex.org/W1993177346","https://openalex.org/W1995254901","https://openalex.org/W1997612995","https://openalex.org/W2001368737","https://openalex.org/W2001368885","https://openalex.org/W2009423060","https://openalex.org/W2009987871","https://openalex.org/W2013870051","https://openalex.org/W2021827099","https://openalex.org/W2024762727","https://openalex.org/W2026159488","https://openalex.org/W2031972197","https://openalex.org/W2035672721","https://openalex.org/W2035687084","https://openalex.org/W2037535298","https://openalex.org/W2037652551","https://openalex.org/W2043383571","https://openalex.org/W2043429268","https://openalex.org/W2044019273","https://openalex.org/W2051381895","https://openalex.org/W2051551120","https://openalex.org/W2053858804","https://openalex.org/W2059844062","https://openalex.org/W2062937938","https://openalex.org/W2063292547","https://openalex.org/W2065326396","https://openalex.org/W2065838297","https://openalex.org/W2067174909","https://openalex.org/W2067447449","https://openalex.org/W2069466107","https://openalex.org/W2072604508","https://openalex.org/W2072683434","https://openalex.org/W2072820038","https://openalex.org/W2073023478","https://openalex.org/W2077096083","https://openalex.org/W2077416963","https://openalex.org/W2077904994","https://openalex.org/W2079199763","https://openalex.org/W2080669209","https://openalex.org/W2081167734","https://openalex.org/W2085726941","https://openalex.org/W2086657356","https://openalex.org/W2087271871","https://openalex.org/W2088879148","https://openalex.org/W2089495268","https://openalex.org/W2091068412","https://openalex.org/W2095016472","https://openalex.org/W2099842555","https://openalex.org/W2102377211","https://openalex.org/W2106140689","https://openalex.org/W2110085665","https://openalex.org/W2112154906","https://openalex.org/W2123986806","https://openalex.org/W2132295918","https://openalex.org/W2138434873","https://openalex.org/W2140151763","https://openalex.org/W2140763734","https://openalex.org/W2140841928","https://openalex.org/W2147993766","https://openalex.org/W2149040114","https://openalex.org/W2149655632","https://openalex.org/W2149801992","https://openalex.org/W2154670681","https://openalex.org/W2155515400","https://openalex.org/W2158542478","https://openalex.org/W2159383649","https://openalex.org/W2161139798","https://openalex.org/W2162415170","https://openalex.org/W2162694453","https://openalex.org/W2169017143","https://openalex.org/W2171791920","https://openalex.org/W2317301320","https://openalex.org/W2321468564","https://openalex.org/W2332177667","https://openalex.org/W2333340978","https://openalex.org/W2333391665","https://openalex.org/W2334529135","https://openalex.org/W2402625670","https://openalex.org/W2412116265","https://openalex.org/W2489889720","https://openalex.org/W2492804765","https://openalex.org/W2517337142","https://openalex.org/W2520216871","https://openalex.org/W2528035299","https://openalex.org/W2528753554","https://openalex.org/W2616199713","https://openalex.org/W2797703692","https://openalex.org/W2899162402","https://openalex.org/W2952635193","https://openalex.org/W3105581675"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2478288626","https://openalex.org/W4391913857","https://openalex.org/W2350741829","https://openalex.org/W2530322880"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":12},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
