{"id":"https://openalex.org/W1998166222","doi":"https://doi.org/10.1007/s10822-014-9753-z","title":"Confidence limits, error bars and method comparison in molecular modeling. Part 1: The calculation of confidence intervals","display_name":"Confidence limits, error bars and method comparison in molecular modeling. Part 1: The calculation of confidence intervals","publication_year":2014,"publication_date":"2014-06-04","ids":{"openalex":"https://openalex.org/W1998166222","doi":"https://doi.org/10.1007/s10822-014-9753-z","mag":"1998166222","pmid":"https://pubmed.ncbi.nlm.nih.gov/24899109"},"language":"en","primary_location":{"id":"doi:10.1007/s10822-014-9753-z","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10822-014-9753-z","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10822-014-9753-z.pdf","source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s10822-014-9753-z.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102879646","display_name":"Anthony Nicholls","orcid":"https://orcid.org/0000-0001-8488-9641"},"institutions":[{"id":"https://openalex.org/I4210129035","display_name":"Nalanda Open University","ror":"https://ror.org/039hcn695","country_code":"IN","type":"education","lineage":["https://openalex.org/I4210129035"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"A. Nicholls","raw_affiliation_strings":["OpenEye Scientific Software, Inc., 9 Bisbee Court, Suite D, Santa Fe, NM, 87508, USA, anthony@eyesopen.com","OpenEye Scientific Software, Inc., Santa Fe, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"OpenEye Scientific Software, Inc., 9 Bisbee Court, Suite D, Santa Fe, NM, 87508, USA, anthony@eyesopen.com","institution_ids":["https://openalex.org/I4210129035"]},{"raw_affiliation_string":"OpenEye Scientific Software, Inc., Santa Fe, USA","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5102879646"],"corresponding_institution_ids":["https://openalex.org/I4210129035"],"apc_list":{"value":3690,"currency":"USD","value_usd":3690},"apc_paid":{"value":3690,"currency":"USD","value_usd":3690},"fwci":3.2495,"has_fulltext":true,"cited_by_count":111,"citation_normalized_percentile":{"value":0.92772291,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"28","issue":"9","first_page":"887","last_page":"918"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9921000003814697,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10206","display_name":"Meta-analysis and systematic reviews","score":0.9786999821662903,"subfield":{"id":"https://openalex.org/subfields/1804","display_name":"Statistics, Probability and Uncertainty"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bootstrapping","display_name":"Bootstrapping (finance)","score":0.8695904612541199},{"id":"https://openalex.org/keywords/confidence-interval","display_name":"Confidence interval","score":0.8086522817611694},{"id":"https://openalex.org/keywords/robust-confidence-intervals","display_name":"Robust confidence intervals","score":0.667563259601593},{"id":"https://openalex.org/keywords/cdf-based-nonparametric-confidence-interval","display_name":"CDF-based nonparametric confidence interval","score":0.6552050113677979},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.6318381428718567},{"id":"https://openalex.org/keywords/confidence-distribution","display_name":"Confidence distribution","score":0.5869009494781494},{"id":"https://openalex.org/keywords/parametric-statistics","display_name":"Parametric statistics","score":0.568656325340271},{"id":"https://openalex.org/keywords/standard-error","display_name":"Standard error","score":0.4724726378917694},{"id":"https://openalex.org/keywords/error-bar","display_name":"Error bar","score":0.4620057940483093},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4268471598625183},{"id":"https://openalex.org/keywords/nonparametric-statistics","display_name":"Nonparametric statistics","score":0.4259337782859802},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4158935546875},{"id":"https://openalex.org/keywords/econometrics","display_name":"Econometrics","score":0.35602259635925293},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3235061764717102}],"concepts":[{"id":"https://openalex.org/C207609745","wikidata":"https://www.wikidata.org/wiki/Q4944086","display_name":"Bootstrapping (finance)","level":2,"score":0.8695904612541199},{"id":"https://openalex.org/C44249647","wikidata":"https://www.wikidata.org/wiki/Q208498","display_name":"Confidence interval","level":2,"score":0.8086522817611694},{"id":"https://openalex.org/C66520545","wikidata":"https://www.wikidata.org/wiki/Q7353538","display_name":"Robust confidence intervals","level":3,"score":0.667563259601593},{"id":"https://openalex.org/C42468098","wikidata":"https://www.wikidata.org/wiki/Q5009921","display_name":"CDF-based nonparametric confidence interval","level":3,"score":0.6552050113677979},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.6318381428718567},{"id":"https://openalex.org/C13662513","wikidata":"https://www.wikidata.org/wiki/Q5160087","display_name":"Confidence distribution","level":3,"score":0.5869009494781494},{"id":"https://openalex.org/C117251300","wikidata":"https://www.wikidata.org/wiki/Q1849855","display_name":"Parametric statistics","level":2,"score":0.568656325340271},{"id":"https://openalex.org/C18747219","wikidata":"https://www.wikidata.org/wiki/Q620994","display_name":"Standard error","level":2,"score":0.4724726378917694},{"id":"https://openalex.org/C170797541","wikidata":"https://www.wikidata.org/wiki/Q452399","display_name":"Error bar","level":2,"score":0.4620057940483093},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4268471598625183},{"id":"https://openalex.org/C102366305","wikidata":"https://www.wikidata.org/wiki/Q1097688","display_name":"Nonparametric statistics","level":2,"score":0.4259337782859802},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4158935546875},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.35602259635925293},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3235061764717102},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011336","descriptor_name":"Probability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016011","descriptor_name":"Normal Distribution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016011","descriptor_name":"Normal Distribution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016011","descriptor_name":"Normal Distribution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016014","descriptor_name":"Linear Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016014","descriptor_name":"Linear Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016014","descriptor_name":"Linear Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017076","descriptor_name":"Computer-Aided Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017076","descriptor_name":"Computer-Aided Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017076","descriptor_name":"Computer-Aided Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019540","descriptor_name":"Area Under Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019540","descriptor_name":"Area Under Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019540","descriptor_name":"Area Under Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1007/s10822-014-9753-z","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10822-014-9753-z","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10822-014-9753-z.pdf","source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},{"id":"pmid:24899109","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24899109","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of computer-aided molecular design","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4175406","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4175406","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Comput Aided Mol Des","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1007/s10822-014-9753-z","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10822-014-9753-z","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10822-014-9753-z.pdf","source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1998166222.pdf","grobid_xml":"https://content.openalex.org/works/W1998166222.grobid-xml"},"referenced_works_count":66,"referenced_works":["https://openalex.org/W39572901","https://openalex.org/W161994183","https://openalex.org/W391859852","https://openalex.org/W1480526195","https://openalex.org/W1494853941","https://openalex.org/W1506911198","https://openalex.org/W1542459729","https://openalex.org/W1571975558","https://openalex.org/W1602551265","https://openalex.org/W1865282656","https://openalex.org/W1964404845","https://openalex.org/W1971034820","https://openalex.org/W1980544792","https://openalex.org/W1999519914","https://openalex.org/W2001816314","https://openalex.org/W2008640468","https://openalex.org/W2008792691","https://openalex.org/W2013420882","https://openalex.org/W2015907087","https://openalex.org/W2018742491","https://openalex.org/W2023601759","https://openalex.org/W2033582154","https://openalex.org/W2038886578","https://openalex.org/W2049642512","https://openalex.org/W2062989416","https://openalex.org/W2064747164","https://openalex.org/W2074466695","https://openalex.org/W2080749511","https://openalex.org/W2081951886","https://openalex.org/W2088562507","https://openalex.org/W2120100126","https://openalex.org/W2122268048","https://openalex.org/W2122686681","https://openalex.org/W2125624687","https://openalex.org/W2126163471","https://openalex.org/W2127635577","https://openalex.org/W2127760066","https://openalex.org/W2128833328","https://openalex.org/W2142635246","https://openalex.org/W2144981148","https://openalex.org/W2147528194","https://openalex.org/W2153204884","https://openalex.org/W2157825442","https://openalex.org/W2168175751","https://openalex.org/W2187644822","https://openalex.org/W2292609460","https://openalex.org/W2328176404","https://openalex.org/W2331384579","https://openalex.org/W2413573154","https://openalex.org/W2419048701","https://openalex.org/W2479390720","https://openalex.org/W2792718482","https://openalex.org/W2797545377","https://openalex.org/W2802241598","https://openalex.org/W2802306405","https://openalex.org/W2807981689","https://openalex.org/W3044681081","https://openalex.org/W3105309374","https://openalex.org/W3106333376","https://openalex.org/W3149745985","https://openalex.org/W4205102929","https://openalex.org/W4205598956","https://openalex.org/W4206080774","https://openalex.org/W4236358665","https://openalex.org/W4247236552","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2350449091","https://openalex.org/W913292429","https://openalex.org/W3178283125","https://openalex.org/W2183054518","https://openalex.org/W3006095576","https://openalex.org/W2349984623","https://openalex.org/W2111482368","https://openalex.org/W2112356694","https://openalex.org/W4281295096","https://openalex.org/W2497972277"],"abstract_inverted_index":{"Computational":[0],"chemistry":[1],"is":[2,25],"a":[3],"largely":[4],"empirical":[5],"field":[6],"that":[7],"makes":[8],"predictions":[9],"with":[10],"substantial":[11],"uncertainty.":[12],"And":[13],"yet":[14],"the":[15,34],"use":[16],"of":[17,36],"standard":[18],"statistical":[19],"methods":[20],"to":[21],"quantify":[22],"this":[23],"uncertainty":[24],"often":[26],"absent":[27],"from":[28],"published":[29],"reports.":[30],"This":[31],"article":[32],"covers":[33],"basics":[35],"confidence":[37],"interval":[38],"estimation":[39],"for":[40],"molecular":[41],"modeling":[42],"using":[43],"classical":[44],"statistics.":[45],"Alternate":[46],"approaches":[47],"such":[48],"as":[49],"non-parametric":[50],"statistics":[51],"and":[52],"bootstrapping":[53],"are":[54],"discussed.":[55]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":11},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":23},{"year":2021,"cited_by_count":15},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":12},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":1}],"updated_date":"2026-07-31T08:31:51.225901","created_date":"2025-10-10T00:00:00"}
