{"id":"https://openalex.org/W2064748397","doi":"https://doi.org/10.1007/s10822-013-9664-4","title":"From data point timelines to a well curated data set, data mining of experimental data and chemical structure data from scientific articles, problems and possible solutions","display_name":"From data point timelines to a well curated data set, data mining of experimental data and chemical structure data from scientific articles, problems and possible solutions","publication_year":2013,"publication_date":"2013-07-01","ids":{"openalex":"https://openalex.org/W2064748397","doi":"https://doi.org/10.1007/s10822-013-9664-4","mag":"2064748397","pmid":"https://pubmed.ncbi.nlm.nih.gov/23884706"},"language":"en","primary_location":{"id":"doi:10.1007/s10822-013-9664-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-013-9664-4","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5014361467","display_name":"Villu Ruusmann","orcid":null},"institutions":[{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":false,"raw_author_name":"Villu Ruusmann","raw_affiliation_strings":["Institute of Chemistry, University of Tartu, Ravila 14A, Tartu, Estonia","University of Tartu"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Chemistry, University of Tartu, Ravila 14A, Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]},{"raw_affiliation_string":"University of Tartu","institution_ids":["https://openalex.org/I56085075"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051041102","display_name":"Uko Maran","orcid":"https://orcid.org/0000-0003-2506-0934"},"institutions":[{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":true,"raw_author_name":"Uko Maran","raw_affiliation_strings":["Institute of Chemistry, University of Tartu, Ravila 14A, 50411, Tartu, Estonia","University of Tartu"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Chemistry, University of Tartu, Ravila 14A, 50411, Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]},{"raw_affiliation_string":"University of Tartu","institution_ids":["https://openalex.org/I56085075"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5051041102"],"corresponding_institution_ids":["https://openalex.org/I56085075"],"apc_list":{"value":3690,"currency":"USD","value_usd":3690},"apc_paid":null,"fwci":0.8254,"has_fulltext":false,"cited_by_count":21,"citation_normalized_percentile":{"value":0.71975977,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"27","issue":"7","first_page":"583","last_page":"603"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9851999878883362,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9851999878883362,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.98089998960495,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10908","display_name":"Analytical Chemistry and Chromatography","score":0.9419999718666077,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/timeline","display_name":"Timeline","score":0.7559844255447388},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.6563279628753662},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5810642242431641},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5528558492660522},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.47194546461105347},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.456521213054657},{"id":"https://openalex.org/keywords/point","display_name":"Point (geometry)","score":0.4370441138744354},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3906104564666748},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.13179191946983337},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.08858194947242737},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.06798815727233887}],"concepts":[{"id":"https://openalex.org/C4438859","wikidata":"https://www.wikidata.org/wiki/Q186117","display_name":"Timeline","level":2,"score":0.7559844255447388},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.6563279628753662},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5810642242431641},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5528558492660522},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.47194546461105347},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.456521213054657},{"id":"https://openalex.org/C28719098","wikidata":"https://www.wikidata.org/wiki/Q44946","display_name":"Point (geometry)","level":2,"score":0.4370441138744354},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3906104564666748},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.13179191946983337},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.08858194947242737},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.06798815727233887},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1007/s10822-013-9664-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-013-9664-4","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},{"id":"pmid:23884706","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23884706","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of computer-aided molecular design","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":97,"referenced_works":["https://openalex.org/W221173887","https://openalex.org/W563360778","https://openalex.org/W623454765","https://openalex.org/W1481221384","https://openalex.org/W1483801119","https://openalex.org/W1485895807","https://openalex.org/W1560525055","https://openalex.org/W1566055295","https://openalex.org/W1597771873","https://openalex.org/W1600496896","https://openalex.org/W1601495365","https://openalex.org/W1789648369","https://openalex.org/W1965641096","https://openalex.org/W1968350258","https://openalex.org/W1968547802","https://openalex.org/W1973105693","https://openalex.org/W1973153671","https://openalex.org/W1974039487","https://openalex.org/W1974762790","https://openalex.org/W1975147762","https://openalex.org/W1981141491","https://openalex.org/W1983464445","https://openalex.org/W1984678368","https://openalex.org/W1986348105","https://openalex.org/W1988400995","https://openalex.org/W1989577091","https://openalex.org/W1990768268","https://openalex.org/W1993233471","https://openalex.org/W1993981717","https://openalex.org/W1997472847","https://openalex.org/W2010206541","https://openalex.org/W2011940411","https://openalex.org/W2012029757","https://openalex.org/W2012754548","https://openalex.org/W2013678434","https://openalex.org/W2015782772","https://openalex.org/W2019752987","https://openalex.org/W2020284584","https://openalex.org/W2020517144","https://openalex.org/W2021305063","https://openalex.org/W2026386396","https://openalex.org/W2027067387","https://openalex.org/W2028924995","https://openalex.org/W2029815922","https://openalex.org/W2030231778","https://openalex.org/W2032486480","https://openalex.org/W2033647480","https://openalex.org/W2033728745","https://openalex.org/W2034204011","https://openalex.org/W2035203910","https://openalex.org/W2040723715","https://openalex.org/W2041610798","https://openalex.org/W2047399377","https://openalex.org/W2047506727","https://openalex.org/W2053994273","https://openalex.org/W2057069496","https://openalex.org/W2061139820","https://openalex.org/W2061995827","https://openalex.org/W2062427002","https://openalex.org/W2069499971","https://openalex.org/W2070092797","https://openalex.org/W2070442000","https://openalex.org/W2071690933","https://openalex.org/W2071764625","https://openalex.org/W2072722925","https://openalex.org/W2073246664","https://openalex.org/W2075131996","https://openalex.org/W2076147571","https://openalex.org/W2076938186","https://openalex.org/W2077493428","https://openalex.org/W2078693290","https://openalex.org/W2081163165","https://openalex.org/W2081487285","https://openalex.org/W2084087915","https://openalex.org/W2085018984","https://openalex.org/W2085409427","https://openalex.org/W2086837012","https://openalex.org/W2090188030","https://openalex.org/W2091734648","https://openalex.org/W2093002235","https://openalex.org/W2093216528","https://openalex.org/W2099865416","https://openalex.org/W2109880147","https://openalex.org/W2115606156","https://openalex.org/W2128245586","https://openalex.org/W2129243212","https://openalex.org/W2130273545","https://openalex.org/W2138092501","https://openalex.org/W2162823107","https://openalex.org/W2164717834","https://openalex.org/W2164914937","https://openalex.org/W2170588887","https://openalex.org/W2170644559","https://openalex.org/W2171935040","https://openalex.org/W2319706965","https://openalex.org/W2400956757","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W1858249912","https://openalex.org/W2114034199","https://openalex.org/W2027108423","https://openalex.org/W1855666948","https://openalex.org/W2758561209","https://openalex.org/W2594414941","https://openalex.org/W1548095260","https://openalex.org/W2781711915","https://openalex.org/W2112817590","https://openalex.org/W1555291398"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
