{"id":"https://openalex.org/W1987152782","doi":"https://doi.org/10.1007/s10822-012-9587-5","title":"AtlasCBS: a web server to map and explore chemico-biological space","display_name":"AtlasCBS: a web server to map and explore chemico-biological space","publication_year":2012,"publication_date":"2012-07-13","ids":{"openalex":"https://openalex.org/W1987152782","doi":"https://doi.org/10.1007/s10822-012-9587-5","mag":"1987152782","pmid":"https://pubmed.ncbi.nlm.nih.gov/22798082"},"language":"en","primary_location":{"id":"doi:10.1007/s10822-012-9587-5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-012-9587-5","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056460983","display_name":"\u00c1lvaro Cort\u00e9s-Cabrera","orcid":"https://orcid.org/0000-0003-4635-6267"},"institutions":[{"id":"https://openalex.org/I189268942","display_name":"Universidad de Alcal\u00e1","ror":"https://ror.org/04pmn0e78","country_code":"ES","type":"education","lineage":["https://openalex.org/I189268942"]},{"id":"https://openalex.org/I4210146061","display_name":"Centro de Biolog\u00eda Molecular Severo Ochoa","ror":"https://ror.org/03v9e8t09","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210146061"]},{"id":"https://openalex.org/I63634437","display_name":"Universidad Aut\u00f3noma de Madrid","ror":"https://ror.org/01cby8j38","country_code":"ES","type":"education","lineage":["https://openalex.org/I63634437"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"\u00c1lvaro Cort\u00e9s-Cabrera","raw_affiliation_strings":["Departamento de Farmacolog\u00eda, Universidad de Alcal\u00e1, 28871, Alcal\u00e1 de Henares, Madrid, Spain","Unidad de Bioinform\u00e1tica, Centro de Biolog\u00eda Molecular Severo Ochoa (CSIC-UAM), Madrid, Spain","Departamento de Farmacolog\u00eda, Universidad de Alcal\u00e1, Alcal\u00e1 de Henares, Madrid, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Farmacolog\u00eda, Universidad de Alcal\u00e1, 28871, Alcal\u00e1 de Henares, Madrid, Spain","institution_ids":["https://openalex.org/I189268942"]},{"raw_affiliation_string":"Unidad de Bioinform\u00e1tica, Centro de Biolog\u00eda Molecular Severo Ochoa (CSIC-UAM), Madrid, Spain","institution_ids":["https://openalex.org/I4210146061","https://openalex.org/I63634437"]},{"raw_affiliation_string":"Departamento de Farmacolog\u00eda, Universidad de Alcal\u00e1, Alcal\u00e1 de Henares, Madrid, Spain","institution_ids":["https://openalex.org/I189268942"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023692978","display_name":"Antonio Morreale","orcid":"https://orcid.org/0000-0003-4236-0883"},"institutions":[{"id":"https://openalex.org/I134820265","display_name":"Consejo Superior de Investigaciones Cient\u00edficas","ror":"https://ror.org/02gfc7t72","country_code":"ES","type":"government","lineage":["https://openalex.org/I134820265"]},{"id":"https://openalex.org/I4210146061","display_name":"Centro de Biolog\u00eda Molecular Severo Ochoa","ror":"https://ror.org/03v9e8t09","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210146061"]},{"id":"https://openalex.org/I63634437","display_name":"Universidad Aut\u00f3noma de Madrid","ror":"https://ror.org/01cby8j38","country_code":"ES","type":"education","lineage":["https://openalex.org/I63634437"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Antonio Morreale","raw_affiliation_strings":["Unidad de Bioinform\u00e1tica, Centro de Biolog\u00eda Molecular Severo Ochoa (CSIC-UAM), Campus UAM, c/Nicol\u00e1s Cabrera 1, 28049, Madrid, Spain","Unidad de Bioinform\u00e1tica Centro de Biolog\u00eda Molecular Severo Ochoa (CSIC/UAM) Madrid Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Unidad de Bioinform\u00e1tica, Centro de Biolog\u00eda Molecular Severo Ochoa (CSIC-UAM), Campus UAM, c/Nicol\u00e1s Cabrera 1, 28049, Madrid, Spain","institution_ids":["https://openalex.org/I4210146061","https://openalex.org/I63634437"]},{"raw_affiliation_string":"Unidad de Bioinform\u00e1tica Centro de Biolog\u00eda Molecular Severo Ochoa (CSIC/UAM) Madrid Spain","institution_ids":["https://openalex.org/I134820265","https://openalex.org/I63634437"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048905988","display_name":"Federico Gago","orcid":"https://orcid.org/0000-0002-3071-4878"},"institutions":[{"id":"https://openalex.org/I189268942","display_name":"Universidad de Alcal\u00e1","ror":"https://ror.org/04pmn0e78","country_code":"ES","type":"education","lineage":["https://openalex.org/I189268942"]},{"id":"https://openalex.org/I4210121842","display_name":"Instituto de Qu\u00edmica M\u00e9dica","ror":"https://ror.org/02vznxv75","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210121842"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Federico Gago","raw_affiliation_strings":["Departamento de Farmacolog\u00eda, Universidad de Alcal\u00e1, 28871, Alcal\u00e1 de Henares, Madrid, Spain","Unidad Asociada Instituto de Qu\u00edmica M\u00e9dica (CSIC), Madrid, Spain","Departamento de Farmacolog\u00eda, Universidad de Alcal\u00e1, Alcal\u00e1 de Henares, Madrid, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Farmacolog\u00eda, Universidad de Alcal\u00e1, 28871, Alcal\u00e1 de Henares, Madrid, Spain","institution_ids":["https://openalex.org/I189268942"]},{"raw_affiliation_string":"Unidad Asociada Instituto de Qu\u00edmica M\u00e9dica (CSIC), Madrid, Spain","institution_ids":["https://openalex.org/I4210121842"]},{"raw_affiliation_string":"Departamento de Farmacolog\u00eda, Universidad de Alcal\u00e1, Alcal\u00e1 de Henares, Madrid, Spain","institution_ids":["https://openalex.org/I189268942"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044826327","display_name":"Celerino Abad\u2010Zapatero","orcid":"https://orcid.org/0000-0003-0741-9579"},"institutions":[{"id":"https://openalex.org/I189268942","display_name":"Universidad de Alcal\u00e1","ror":"https://ror.org/04pmn0e78","country_code":"ES","type":"education","lineage":["https://openalex.org/I189268942"]},{"id":"https://openalex.org/I39422238","display_name":"University of Illinois Chicago","ror":"https://ror.org/02mpq6x41","country_code":"US","type":"education","lineage":["https://openalex.org/I39422238"]},{"id":"https://openalex.org/I4210121842","display_name":"Instituto de Qu\u00edmica M\u00e9dica","ror":"https://ror.org/02vznxv75","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210121842"]}],"countries":["ES","US"],"is_corresponding":false,"raw_author_name":"Celerino Abad-Zapatero","raw_affiliation_strings":["Departamento de Farmacolog\u00eda, Universidad de Alcal\u00e1, 28871, Alcal\u00e1 de Henares, Madrid, Spain","Unidad Asociada Instituto de Qu\u00edmica M\u00e9dica (CSIC), Madrid, Spain","Center for Pharmaceutical Biotechnology, University of Illinois at Chicago, Chicago, USA","Departamento de Farmacolog\u00eda, Universidad de Alcal\u00e1, Alcal\u00e1 de Henares, Madrid, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Farmacolog\u00eda, Universidad de Alcal\u00e1, 28871, Alcal\u00e1 de Henares, Madrid, Spain","institution_ids":["https://openalex.org/I189268942"]},{"raw_affiliation_string":"Unidad Asociada Instituto de Qu\u00edmica M\u00e9dica (CSIC), Madrid, Spain","institution_ids":["https://openalex.org/I4210121842"]},{"raw_affiliation_string":"Center for Pharmaceutical Biotechnology, University of Illinois at Chicago, Chicago, USA","institution_ids":["https://openalex.org/I39422238"]},{"raw_affiliation_string":"Departamento de Farmacolog\u00eda, Universidad de Alcal\u00e1, Alcal\u00e1 de Henares, Madrid, Spain","institution_ids":["https://openalex.org/I189268942"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":2890,"currency":"EUR","value_usd":3690},"apc_paid":null,"fwci":1.3892,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.80720193,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"26","issue":"9","first_page":"995","last_page":"1003"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9796000123023987,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9693999886512756,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/chembl","display_name":"chEMBL","score":0.9452149868011475},{"id":"https://openalex.org/keywords/chemical-space","display_name":"Chemical space","score":0.6966933608055115},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6333745718002319},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.5624628663063049},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5604269504547119},{"id":"https://openalex.org/keywords/prioritization","display_name":"Prioritization","score":0.481160044670105},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.389068603515625},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.338769793510437},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2831967771053314},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.22546693682670593},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.22286611795425415},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21092373132705688},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.14003986120224}],"concepts":[{"id":"https://openalex.org/C63222358","wikidata":"https://www.wikidata.org/wiki/Q6120337","display_name":"chEMBL","level":3,"score":0.9452149868011475},{"id":"https://openalex.org/C99726746","wikidata":"https://www.wikidata.org/wiki/Q906396","display_name":"Chemical space","level":3,"score":0.6966933608055115},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6333745718002319},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.5624628663063049},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5604269504547119},{"id":"https://openalex.org/C2777615720","wikidata":"https://www.wikidata.org/wiki/Q11888847","display_name":"Prioritization","level":2,"score":0.481160044670105},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.389068603515625},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.338769793510437},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2831967771053314},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.22546693682670593},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.22286611795425415},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21092373132705688},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.14003986120224},{"id":"https://openalex.org/C539667460","wikidata":"https://www.wikidata.org/wiki/Q2414942","display_name":"Management science","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054852","descriptor_name":"Small Molecule Libraries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054852","descriptor_name":"Small Molecule Libraries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054852","descriptor_name":"Small Molecule Libraries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1007/s10822-012-9587-5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-012-9587-5","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},{"id":"pmid:22798082","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22798082","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of computer-aided molecular design","raw_type":null},{"id":"pmh:oai:digital.csic.es:10261/112025","is_oa":false,"landing_page_url":"http://hdl.handle.net/10261/112025","pdf_url":null,"source":{"id":"https://openalex.org/S4306400616","display_name":"DIGITAL.CSIC (Spanish National Research Council (CSIC))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I134820265","host_organization_name":"Consejo Superior de Investigaciones Cient\u00edficas","host_organization_lineage":["https://openalex.org/I134820265"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Art\u00edculo"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6399999856948853,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320314605","display_name":"Astex Pharmaceuticals","ror":"https://ror.org/05fx1fs38"},{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1991590537","https://openalex.org/W1993046136","https://openalex.org/W2008312146","https://openalex.org/W2008525757","https://openalex.org/W2025948031","https://openalex.org/W2061843861","https://openalex.org/W2069247261","https://openalex.org/W2096541451","https://openalex.org/W2096864392","https://openalex.org/W2098889731","https://openalex.org/W2103299776","https://openalex.org/W2127965853","https://openalex.org/W2148797284","https://openalex.org/W2152249789","https://openalex.org/W2166474237","https://openalex.org/W2168493834","https://openalex.org/W4248107770"],"related_works":["https://openalex.org/W3005441379","https://openalex.org/W4207063555","https://openalex.org/W2997728144","https://openalex.org/W2604173773","https://openalex.org/W4210747027","https://openalex.org/W2770765812","https://openalex.org/W3117153716","https://openalex.org/W2791678506","https://openalex.org/W3018201610","https://openalex.org/W2780675302"],"abstract_inverted_index":null,"counts_by_year":[{"year":2021,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
