{"id":"https://openalex.org/W2103420095","doi":"https://doi.org/10.1007/s10822-012-9543-4","title":"Ligand expansion in ligand-based virtual screening using relevance feedback","display_name":"Ligand expansion in ligand-based virtual screening using relevance feedback","publication_year":2012,"publication_date":"2012-01-16","ids":{"openalex":"https://openalex.org/W2103420095","doi":"https://doi.org/10.1007/s10822-012-9543-4","mag":"2103420095","pmid":"https://pubmed.ncbi.nlm.nih.gov/22249773"},"language":"en","primary_location":{"id":"doi:10.1007/s10822-012-9543-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-012-9543-4","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5011865103","display_name":"Ammar Abdo","orcid":"https://orcid.org/0000-0003-4569-2744"},"institutions":[{"id":"https://openalex.org/I31605765","display_name":"Hodeidah University","ror":"https://ror.org/05fkpm735","country_code":"YE","type":"education","lineage":["https://openalex.org/I31605765"]},{"id":"https://openalex.org/I4576418","display_name":"University of Technology Malaysia","ror":"https://ror.org/026w31v75","country_code":"MY","type":"education","lineage":["https://openalex.org/I4576418"]}],"countries":["MY","YE"],"is_corresponding":true,"raw_author_name":"Ammar Abdo","raw_affiliation_strings":["Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, 81310 Skudai, Malaysia. ammar_utm@yahoo.com","Universiti Teknologi Malaysia","Hodeidah University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, 81310 Skudai, Malaysia. ammar_utm@yahoo.com","institution_ids":["https://openalex.org/I4576418"]},{"raw_affiliation_string":"Universiti Teknologi Malaysia","institution_ids":["https://openalex.org/I4576418"]},{"raw_affiliation_string":"Hodeidah University","institution_ids":["https://openalex.org/I31605765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018312503","display_name":"Faisal Saeed","orcid":"https://orcid.org/0000-0002-2822-1708"},"institutions":[{"id":"https://openalex.org/I4576418","display_name":"University of Technology Malaysia","ror":"https://ror.org/026w31v75","country_code":"MY","type":"education","lineage":["https://openalex.org/I4576418"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Faisal Saeed","raw_affiliation_strings":["Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, 81310, Skudai, Malaysia","UniversitI Teknologi Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, 81310, Skudai, Malaysia","institution_ids":["https://openalex.org/I4576418"]},{"raw_affiliation_string":"UniversitI Teknologi Malaysia","institution_ids":["https://openalex.org/I4576418"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008179027","display_name":"Hentabli Hamza","orcid":"https://orcid.org/0000-0002-9530-2815"},"institutions":[{"id":"https://openalex.org/I4576418","display_name":"University of Technology Malaysia","ror":"https://ror.org/026w31v75","country_code":"MY","type":"education","lineage":["https://openalex.org/I4576418"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Hentabli Hamza","raw_affiliation_strings":["Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, 81310, Skudai, Malaysia","UniversitI Teknologi Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, 81310, Skudai, Malaysia","institution_ids":["https://openalex.org/I4576418"]},{"raw_affiliation_string":"UniversitI Teknologi Malaysia","institution_ids":["https://openalex.org/I4576418"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101816891","display_name":"Ali Ahmed","orcid":"https://orcid.org/0000-0002-8944-8922"},"institutions":[{"id":"https://openalex.org/I4576418","display_name":"University of Technology Malaysia","ror":"https://ror.org/026w31v75","country_code":"MY","type":"education","lineage":["https://openalex.org/I4576418"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Ali Ahmed","raw_affiliation_strings":["Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, 81310, Skudai, Malaysia","UniversitI Teknologi Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, 81310, Skudai, Malaysia","institution_ids":["https://openalex.org/I4576418"]},{"raw_affiliation_string":"UniversitI Teknologi Malaysia","institution_ids":["https://openalex.org/I4576418"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012641332","display_name":"Naomie Salim","orcid":"https://orcid.org/0000-0001-8509-3055"},"institutions":[{"id":"https://openalex.org/I4576418","display_name":"University of Technology Malaysia","ror":"https://ror.org/026w31v75","country_code":"MY","type":"education","lineage":["https://openalex.org/I4576418"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Naomie Salim","raw_affiliation_strings":["Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, 81310, Skudai, Malaysia","UniversitI Teknologi Malaysia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer Science and Information Systems, Universiti Teknologi Malaysia, 81310, Skudai, Malaysia","institution_ids":["https://openalex.org/I4576418"]},{"raw_affiliation_string":"UniversitI Teknologi Malaysia","institution_ids":["https://openalex.org/I4576418"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5011865103"],"corresponding_institution_ids":["https://openalex.org/I31605765","https://openalex.org/I4576418"],"apc_list":{"value":3690,"currency":"USD","value_usd":3690},"apc_paid":null,"fwci":4.5311,"has_fulltext":false,"cited_by_count":29,"citation_normalized_percentile":{"value":0.95091578,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"26","issue":"3","first_page":"279","last_page":"287"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9898999929428101,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9606000185012817,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.7425971031188965},{"id":"https://openalex.org/keywords/virtual-screening","display_name":"Virtual screening","score":0.7419109344482422},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6674451231956482},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.6489841938018799},{"id":"https://openalex.org/keywords/ligand","display_name":"Ligand (biochemistry)","score":0.6255877614021301},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6030541658401489},{"id":"https://openalex.org/keywords/relevance-feedback","display_name":"Relevance feedback","score":0.5757725238800049},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.532704770565033},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4519219398498535},{"id":"https://openalex.org/keywords/bayesian-network","display_name":"Bayesian network","score":0.42878153920173645},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.41509565711021423},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.28823578357696533},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.2706588804721832},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20382574200630188},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.1980213224887848},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11970183253288269},{"id":"https://openalex.org/keywords/image-retrieval","display_name":"Image retrieval","score":0.06932836771011353}],"concepts":[{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.7425971031188965},{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.7419109344482422},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6674451231956482},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.6489841938018799},{"id":"https://openalex.org/C116569031","wikidata":"https://www.wikidata.org/wiki/Q899107","display_name":"Ligand (biochemistry)","level":3,"score":0.6255877614021301},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6030541658401489},{"id":"https://openalex.org/C2779532271","wikidata":"https://www.wikidata.org/wiki/Q445558","display_name":"Relevance feedback","level":4,"score":0.5757725238800049},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.532704770565033},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4519219398498535},{"id":"https://openalex.org/C33724603","wikidata":"https://www.wikidata.org/wiki/Q812540","display_name":"Bayesian network","level":2,"score":0.42878153920173645},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41509565711021423},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.28823578357696533},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.2706588804721832},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20382574200630188},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.1980213224887848},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11970183253288269},{"id":"https://openalex.org/C1667742","wikidata":"https://www.wikidata.org/wiki/Q10927554","display_name":"Image retrieval","level":3,"score":0.06932836771011353},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004353","descriptor_name":"Drug Evaluation, Preclinical","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004353","descriptor_name":"Drug Evaluation, Preclinical","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004353","descriptor_name":"Drug Evaluation, Preclinical","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1007/s10822-012-9543-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-012-9543-4","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},{"id":"pmid:22249773","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22249773","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of computer-aided molecular design","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":27,"referenced_works":["https://openalex.org/W1531524766","https://openalex.org/W1537936917","https://openalex.org/W1964513093","https://openalex.org/W1974041968","https://openalex.org/W1984518758","https://openalex.org/W1990748933","https://openalex.org/W1992095612","https://openalex.org/W1993492933","https://openalex.org/W2002664886","https://openalex.org/W2014276094","https://openalex.org/W2021748110","https://openalex.org/W2030087063","https://openalex.org/W2034647853","https://openalex.org/W2050749899","https://openalex.org/W2052943632","https://openalex.org/W2071200203","https://openalex.org/W2096729078","https://openalex.org/W2119432555","https://openalex.org/W2125253492","https://openalex.org/W2154906759","https://openalex.org/W2158024647","https://openalex.org/W2161116405","https://openalex.org/W2320034101","https://openalex.org/W2491350907","https://openalex.org/W2492427238","https://openalex.org/W3083116277","https://openalex.org/W3171830700"],"related_works":["https://openalex.org/W3180887190","https://openalex.org/W1483679762","https://openalex.org/W2320211095","https://openalex.org/W2308164565","https://openalex.org/W2062768126","https://openalex.org/W2922499735","https://openalex.org/W3003855012","https://openalex.org/W1566373881","https://openalex.org/W1589134610","https://openalex.org/W1572278127"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":7},{"year":2012,"cited_by_count":3}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
