{"id":"https://openalex.org/W2053058748","doi":"https://doi.org/10.1007/s10822-008-9253-0","title":"Comparison of structure fingerprint and molecular interaction field based methods in explaining biological similarity of small molecules in cell-based screens","display_name":"Comparison of structure fingerprint and molecular interaction field based methods in explaining biological similarity of small molecules in cell-based screens","publication_year":2008,"publication_date":"2008-12-02","ids":{"openalex":"https://openalex.org/W2053058748","doi":"https://doi.org/10.1007/s10822-008-9253-0","mag":"2053058748"},"language":"en","primary_location":{"id":"doi:10.1007/s10822-008-9253-0","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-008-9253-0","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059691139","display_name":"Pekka Tiikkainen","orcid":null},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]},{"id":"https://openalex.org/I4210140120","display_name":"Turku Centre for Biotechnology","ror":"https://ror.org/0421ba211","country_code":"FI","type":"facility","lineage":["https://openalex.org/I4210140120"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Pekka Tiikkainen","raw_affiliation_strings":["VTT Medical Biotechnology and University of Turku, P.O. Box 106, 20521, Turku, Finland","VTT Medical Biotechnology and University of Turku"],"affiliations":[{"raw_affiliation_string":"VTT Medical Biotechnology and University of Turku, P.O. Box 106, 20521, Turku, Finland","institution_ids":["https://openalex.org/I4210140120","https://openalex.org/I155660961"]},{"raw_affiliation_string":"VTT Medical Biotechnology and University of Turku","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074083544","display_name":"Antti Poso","orcid":"https://orcid.org/0000-0003-4196-4204"},"institutions":[{"id":"https://openalex.org/I175532246","display_name":"University of Eastern Finland","ror":"https://ror.org/00cyydd11","country_code":"FI","type":"education","lineage":["https://openalex.org/I175532246"]},{"id":"https://openalex.org/I4210092991","display_name":"Kuopio University Hospital","ror":"https://ror.org/00fqdfs68","country_code":"FI","type":"healthcare","lineage":["https://openalex.org/I4210092991"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Antti Poso","raw_affiliation_strings":["Department of Pharmaceutical Chemistry, University of Kuopio, P.O. Box 1627, 70211, Kuopio, Finland","University of Kuopio"],"affiliations":[{"raw_affiliation_string":"Department of Pharmaceutical Chemistry, University of Kuopio, P.O. Box 1627, 70211, Kuopio, Finland","institution_ids":["https://openalex.org/I175532246"]},{"raw_affiliation_string":"University of Kuopio","institution_ids":["https://openalex.org/I4210092991"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5050670008","display_name":"Olli Kallioniemi","orcid":"https://orcid.org/0000-0002-3231-0332"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]},{"id":"https://openalex.org/I4210140120","display_name":"Turku Centre for Biotechnology","ror":"https://ror.org/0421ba211","country_code":"FI","type":"facility","lineage":["https://openalex.org/I4210140120"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Olli Kallioniemi","raw_affiliation_strings":["VTT Medical Biotechnology and University of Turku, P.O. Box 106, 20521, Turku, Finland","VTT Medical Biotechnology and University of Turku"],"affiliations":[{"raw_affiliation_string":"VTT Medical Biotechnology and University of Turku, P.O. Box 106, 20521, Turku, Finland","institution_ids":["https://openalex.org/I4210140120","https://openalex.org/I155660961"]},{"raw_affiliation_string":"VTT Medical Biotechnology and University of Turku","institution_ids":["https://openalex.org/I155660961"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5059691139"],"corresponding_institution_ids":["https://openalex.org/I155660961","https://openalex.org/I4210140120"],"apc_list":{"value":2890,"currency":"EUR","value_usd":3690},"apc_paid":null,"fwci":1.2386,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.80524026,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"23","issue":"4","first_page":"227","last_page":"239"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12561","display_name":"bioluminescence and chemiluminescence research","score":0.9729999899864197,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.7914548516273499},{"id":"https://openalex.org/keywords/chemical-similarity","display_name":"Chemical similarity","score":0.7021310925483704},{"id":"https://openalex.org/keywords/virtual-screening","display_name":"Virtual screening","score":0.546459972858429},{"id":"https://openalex.org/keywords/fingerprint","display_name":"Fingerprint (computing)","score":0.5105510950088501},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.47507017850875854},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.42846575379371643},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.4208022654056549},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4123956561088562},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41048094630241394},{"id":"https://openalex.org/keywords/structural-similarity","display_name":"Structural similarity","score":0.38247746229171753},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37665337324142456},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.37472277879714966},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3432155251502991},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.25068503618240356},{"id":"https://openalex.org/keywords/pharmacophore","display_name":"Pharmacophore","score":0.24137672781944275},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13390100002288818},{"id":"https://openalex.org/keywords/stereochemistry","display_name":"Stereochemistry","score":0.09233701229095459},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.0686286985874176}],"concepts":[{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.7914548516273499},{"id":"https://openalex.org/C24259465","wikidata":"https://www.wikidata.org/wiki/Q2272153","display_name":"Chemical similarity","level":3,"score":0.7021310925483704},{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.546459972858429},{"id":"https://openalex.org/C2777826928","wikidata":"https://www.wikidata.org/wiki/Q3745713","display_name":"Fingerprint (computing)","level":2,"score":0.5105510950088501},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.47507017850875854},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.42846575379371643},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.4208022654056549},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4123956561088562},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41048094630241394},{"id":"https://openalex.org/C139489369","wikidata":"https://www.wikidata.org/wiki/Q770846","display_name":"Structural similarity","level":2,"score":0.38247746229171753},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37665337324142456},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.37472277879714966},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3432155251502991},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.25068503618240356},{"id":"https://openalex.org/C56173144","wikidata":"https://www.wikidata.org/wiki/Q1539893","display_name":"Pharmacophore","level":2,"score":0.24137672781944275},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13390100002288818},{"id":"https://openalex.org/C71240020","wikidata":"https://www.wikidata.org/wiki/Q186011","display_name":"Stereochemistry","level":1,"score":0.09233701229095459},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0686286985874176}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s10822-008-9253-0","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-008-9253-0","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W1984335552","https://openalex.org/W1990451437","https://openalex.org/W1991262449","https://openalex.org/W1993421185","https://openalex.org/W2000607259","https://openalex.org/W2009311325","https://openalex.org/W2012971796","https://openalex.org/W2014123957","https://openalex.org/W2023550615","https://openalex.org/W2032658080","https://openalex.org/W2042110087","https://openalex.org/W2056593372","https://openalex.org/W2067690954","https://openalex.org/W2076522413","https://openalex.org/W2080653934","https://openalex.org/W2082933952","https://openalex.org/W2090283740","https://openalex.org/W2124824199","https://openalex.org/W2125877278","https://openalex.org/W2127760066","https://openalex.org/W2151175139","https://openalex.org/W2156077095"],"related_works":["https://openalex.org/W3206219789","https://openalex.org/W2770975816","https://openalex.org/W4255337529","https://openalex.org/W3046751625","https://openalex.org/W3042279869","https://openalex.org/W1537065157","https://openalex.org/W2085028502","https://openalex.org/W4292296636","https://openalex.org/W2083739814","https://openalex.org/W4206533301"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2016-06-24T00:00:00"}
