{"id":"https://openalex.org/W1987421969","doi":"https://doi.org/10.1007/s10822-005-9006-2","title":"Topological side-chain classification of \u03b2-turns: Ideal motifs for peptidomimetic development","display_name":"Topological side-chain classification of \u03b2-turns: Ideal motifs for peptidomimetic development","publication_year":2005,"publication_date":"2005-08-01","ids":{"openalex":"https://openalex.org/W1987421969","doi":"https://doi.org/10.1007/s10822-005-9006-2","mag":"1987421969","pmid":"https://pubmed.ncbi.nlm.nih.gov/16328857"},"language":"en","primary_location":{"id":"doi:10.1007/s10822-005-9006-2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-005-9006-2","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047164564","display_name":"Tran Trung Tran","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tran Trung Tran","raw_affiliation_strings":["Protagonist Pty Ltd, Level 7, Queensland Bioscience Precinct, 306 Carmody Road, 4072, Brisbane, St Lucia, Australia","Protagonist Pty Ltd, Level 7, Queensland Bioscience Precinct, Brisbane, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Protagonist Pty Ltd, Level 7, Queensland Bioscience Precinct, 306 Carmody Road, 4072, Brisbane, St Lucia, Australia","institution_ids":[]},{"raw_affiliation_string":"Protagonist Pty Ltd, Level 7, Queensland Bioscience Precinct, Brisbane, Australia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078161676","display_name":"Jim McKie","orcid":null},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Jim McKie","raw_affiliation_strings":["Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040362097","display_name":"Wim Meutermans","orcid":null},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Wim D.F. Meutermans","raw_affiliation_strings":["Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063464436","display_name":"Gregory T. Bourne","orcid":"https://orcid.org/0000-0002-2792-2895"},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Gregory T. Bourne","raw_affiliation_strings":["Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia","Protagonist Pty Ltd, Level 7, Queensland Bioscience Precinct, Brisbane, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia","institution_ids":["https://openalex.org/I165143802"]},{"raw_affiliation_string":"Protagonist Pty Ltd, Level 7, Queensland Bioscience Precinct, Brisbane, Australia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103874648","display_name":"Peter R. Andrews","orcid":null},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Peter R. Andrews","raw_affiliation_strings":["Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059952901","display_name":"Mark L. Smythe","orcid":"https://orcid.org/0000-0001-7840-1021"},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Mark L. Smythe","raw_affiliation_strings":["Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia","Protagonist Pty Ltd, Level 7, Queensland Bioscience Precinct, Brisbane, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia","institution_ids":["https://openalex.org/I165143802"]},{"raw_affiliation_string":"Protagonist Pty Ltd, Level 7, Queensland Bioscience Precinct, Brisbane, Australia","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5059952901"],"corresponding_institution_ids":["https://openalex.org/I165143802"],"apc_list":{"value":2890,"currency":"EUR","value_usd":3690},"apc_paid":null,"fwci":1.0047,"has_fulltext":false,"cited_by_count":14,"citation_normalized_percentile":{"value":0.73005959,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"19","issue":"8","first_page":"551","last_page":"566"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13326","display_name":"Biochemical and Structural Characterization","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/peptidomimetic","display_name":"Peptidomimetic","score":0.8416988849639893},{"id":"https://openalex.org/keywords/ideal","display_name":"Ideal (ethics)","score":0.6514421701431274},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.4657151699066162},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3340849280357361},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3094397187232971},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.20638716220855713},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.18766045570373535},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.11911830306053162},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.07445278763771057}],"concepts":[{"id":"https://openalex.org/C124790011","wikidata":"https://www.wikidata.org/wiki/Q2069797","display_name":"Peptidomimetic","level":3,"score":0.8416988849639893},{"id":"https://openalex.org/C2776639384","wikidata":"https://www.wikidata.org/wiki/Q840396","display_name":"Ideal (ethics)","level":2,"score":0.6514421701431274},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.4657151699066162},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3340849280357361},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3094397187232971},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.20638716220855713},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.18766045570373535},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.11911830306053162},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.07445278763771057},{"id":"https://openalex.org/C46141821","wikidata":"https://www.wikidata.org/wiki/Q209402","display_name":"Nuclear magnetic resonance","level":1,"score":0.0},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018716","descriptor_name":"Molecular Mimicry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018716","descriptor_name":"Molecular Mimicry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018716","descriptor_name":"Molecular Mimicry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1007/s10822-005-9006-2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-005-9006-2","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},{"id":"pmid:16328857","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16328857","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of computer-aided molecular design","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":65,"referenced_works":["https://openalex.org/W44778504","https://openalex.org/W230603162","https://openalex.org/W1489608363","https://openalex.org/W1547863077","https://openalex.org/W1586022877","https://openalex.org/W1940950356","https://openalex.org/W1963676212","https://openalex.org/W1963704941","https://openalex.org/W1965274591","https://openalex.org/W1966041739","https://openalex.org/W1967881203","https://openalex.org/W1970230318","https://openalex.org/W1970779162","https://openalex.org/W1973610173","https://openalex.org/W1973654474","https://openalex.org/W1977808358","https://openalex.org/W1979272734","https://openalex.org/W1983058620","https://openalex.org/W1984640820","https://openalex.org/W1985314662","https://openalex.org/W1995245717","https://openalex.org/W1999676402","https://openalex.org/W2000328816","https://openalex.org/W2006281337","https://openalex.org/W2007050423","https://openalex.org/W2008708467","https://openalex.org/W2025822492","https://openalex.org/W2025935196","https://openalex.org/W2027132765","https://openalex.org/W2029277542","https://openalex.org/W2038147123","https://openalex.org/W2038910312","https://openalex.org/W2041108610","https://openalex.org/W2046633810","https://openalex.org/W2051334762","https://openalex.org/W2053721311","https://openalex.org/W2056852982","https://openalex.org/W2057127849","https://openalex.org/W2057642670","https://openalex.org/W2059249994","https://openalex.org/W2060804987","https://openalex.org/W2064222302","https://openalex.org/W2066686002","https://openalex.org/W2073634532","https://openalex.org/W2074655761","https://openalex.org/W2079022876","https://openalex.org/W2081525633","https://openalex.org/W2081532018","https://openalex.org/W2094695671","https://openalex.org/W2095805596","https://openalex.org/W2110478240","https://openalex.org/W2113403117","https://openalex.org/W2118587067","https://openalex.org/W2158919479","https://openalex.org/W2229908198","https://openalex.org/W2402987469","https://openalex.org/W2420601875","https://openalex.org/W2490574135","https://openalex.org/W2950040816","https://openalex.org/W2950571911","https://openalex.org/W3004691148","https://openalex.org/W4243609459","https://openalex.org/W4253658821","https://openalex.org/W4302414012","https://openalex.org/W4392468778"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W3185899234","https://openalex.org/W2018226025","https://openalex.org/W2998398254","https://openalex.org/W2978645735","https://openalex.org/W1975262099","https://openalex.org/W4311463290","https://openalex.org/W4252704769","https://openalex.org/W2034497626","https://openalex.org/W2142718340"],"abstract_inverted_index":null,"counts_by_year":[{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2016-06-24T00:00:00"}
