{"id":"https://openalex.org/W2008280409","doi":"https://doi.org/10.1007/s10822-004-3752-4","title":"BODIL: a molecular modeling environment for structure-function analysis and drug design","display_name":"BODIL: a molecular modeling environment for structure-function analysis and drug design","publication_year":2004,"publication_date":"2004-06-01","ids":{"openalex":"https://openalex.org/W2008280409","doi":"https://doi.org/10.1007/s10822-004-3752-4","mag":"2008280409","pmid":"https://pubmed.ncbi.nlm.nih.gov/15663001"},"language":"en","primary_location":{"id":"doi:10.1007/s10822-004-3752-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-004-3752-4","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090791470","display_name":"Jukka V. Lehtonen","orcid":"https://orcid.org/0000-0003-0385-0636"},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Jukka V. Lehtonen","raw_affiliation_strings":["Department of Biochemistry and Pharmacy, Abo Akademi University, Tykist\u00f6katu 6A, FIN-20520 Turku, Finland","Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, Abo Akademi University, Tykist\u00f6katu 6A, FIN-20520 Turku, Finland","institution_ids":[]},{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland","institution_ids":["https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052961276","display_name":"Dan-Johan Still","orcid":null},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Dan-Johan Still","raw_affiliation_strings":["Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","institution_ids":["https://openalex.org/I130217899"]},{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland","institution_ids":["https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109119403","display_name":"Ville-v. Rantanen","orcid":null},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Ville-v. Rantanen","raw_affiliation_strings":["Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","institution_ids":["https://openalex.org/I130217899"]},{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland","institution_ids":["https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076218872","display_name":"Jan Ekholm","orcid":null},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Jan Ekholm","raw_affiliation_strings":["Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","institution_ids":["https://openalex.org/I130217899"]},{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland","institution_ids":["https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5098193418","display_name":"Dag Bj\ufffdrklund","orcid":null},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Dag Bj\ufffdrklund","raw_affiliation_strings":["Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland","institution_ids":["https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023391438","display_name":"Zuhair Iftikhar","orcid":null},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Zuhair Iftikhar","raw_affiliation_strings":["Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","institution_ids":["https://openalex.org/I130217899"]},{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland","institution_ids":["https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024618517","display_name":"Mikko Huhtala","orcid":"https://orcid.org/0000-0001-6070-7604"},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Mikko Huhtala","raw_affiliation_strings":["Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","institution_ids":["https://openalex.org/I130217899"]},{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland","institution_ids":["https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044075177","display_name":"Susanna Repo","orcid":"https://orcid.org/0000-0003-3488-4767"},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Susanna Repo","raw_affiliation_strings":["Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","institution_ids":["https://openalex.org/I130217899"]},{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland","institution_ids":["https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024036259","display_name":"Antti Jussila","orcid":null},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Antti Jussila","raw_affiliation_strings":["Department of Mathematics, University of Turku, Matematiikan laitos, Turun yliopisto, FIN-20014, Finland","Department of mathematics, University of Turku, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Turku, Matematiikan laitos, Turun yliopisto, FIN-20014, Finland","institution_ids":["https://openalex.org/I155660961"]},{"raw_affiliation_string":"Department of mathematics, University of Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101628711","display_name":"Jussi Jaakkola","orcid":"https://orcid.org/0009-0005-0144-9103"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Jussi Jaakkola","raw_affiliation_strings":["Department of Mathematics, University of Turku, Matematiikan laitos, Turun yliopisto, FIN-20014, Finland","Department of mathematics, University of Turku, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Turku, Matematiikan laitos, Turun yliopisto, FIN-20014, Finland","institution_ids":["https://openalex.org/I155660961"]},{"raw_affiliation_string":"Department of mathematics, University of Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113566000","display_name":"Olli Pentik\ufffdinen","orcid":null},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Olli Pentik\ufffdinen","raw_affiliation_strings":["Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland","institution_ids":["https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108486794","display_name":"Tommi H. Nyr\ufffdnen","orcid":null},"institutions":[{"id":"https://openalex.org/I4210150043","display_name":"CSC - IT Center for Science (Finland)","ror":"https://ror.org/04m8m1253","country_code":"FI","type":"company","lineage":["https://openalex.org/I4210150043"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Tommi Nyr\ufffdnen","raw_affiliation_strings":["CSC, the Finnish IT Center for Science, Espoo, Finland"],"affiliations":[{"raw_affiliation_string":"CSC, the Finnish IT Center for Science, Espoo, Finland","institution_ids":["https://openalex.org/I4210150043"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056017321","display_name":"Tiina A. Salminen","orcid":"https://orcid.org/0000-0002-4135-8020"},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Tiina Salminen","raw_affiliation_strings":["Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","institution_ids":["https://openalex.org/I130217899"]},{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland","institution_ids":["https://openalex.org/I130217899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054771020","display_name":"Mats Gyllenberg","orcid":"https://orcid.org/0000-0002-0967-8454"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]},{"id":"https://openalex.org/I2800229700","display_name":"Helsinki Institute of Physics","ror":"https://ror.org/01x2x1522","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I2800229700","https://openalex.org/I63548447","https://openalex.org/I94722563","https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Mats Gyllenberg","raw_affiliation_strings":["Department of Mathematics and Statistics, Rolf Nevanlinna Institute, University of Helsinki, FIN-00014, Finland","Department of Mathematics, University of Turku, Matematiikan laitos, Turun yliopisto, FIN-20014, Finland","Department of Mathematics and Statistics, Rolf Nevanlinna Institute, University of Helsinki, Finland","Department of Mathematics, University of Turku, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Statistics, Rolf Nevanlinna Institute, University of Helsinki, FIN-00014, Finland","institution_ids":["https://openalex.org/I2800229700"]},{"raw_affiliation_string":"Department of Mathematics, University of Turku, Matematiikan laitos, Turun yliopisto, FIN-20014, Finland","institution_ids":["https://openalex.org/I155660961"]},{"raw_affiliation_string":"Department of Mathematics and Statistics, Rolf Nevanlinna Institute, University of Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]},{"raw_affiliation_string":"Department of Mathematics, University of Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089062316","display_name":"Mark S. Johnson","orcid":"https://orcid.org/0000-0002-0496-358X"},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Mark S. Johnson","raw_affiliation_strings":["Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Tykist\u00f6katu 6A, Turku, FIN-20520, Finland","institution_ids":["https://openalex.org/I130217899"]},{"raw_affiliation_string":"Department of Biochemistry and Pharmacy, \u00c5bo Akademi University, Finland","institution_ids":["https://openalex.org/I130217899"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":15,"corresponding_author_ids":["https://openalex.org/A5090791470"],"corresponding_institution_ids":["https://openalex.org/I130217899"],"apc_list":{"value":2890,"currency":"EUR","value_usd":3690},"apc_paid":null,"fwci":8.5325,"has_fulltext":false,"cited_by_count":224,"citation_normalized_percentile":{"value":0.98462489,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"18","issue":"6","first_page":"401","last_page":"419"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/molecular-graphics","display_name":"Molecular graphics","score":0.7568168640136719},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.652310848236084},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.5817254781723022},{"id":"https://openalex.org/keywords/graphics","display_name":"Graphics","score":0.5785811543464661},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.45284852385520935},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics","score":0.43502774834632874},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.32365208864212036},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.25241103768348694},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.1988086700439453},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.13481605052947998},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.06324967741966248}],"concepts":[{"id":"https://openalex.org/C126766683","wikidata":"https://www.wikidata.org/wiki/Q6896006","display_name":"Molecular graphics","level":3,"score":0.7568168640136719},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.652310848236084},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.5817254781723022},{"id":"https://openalex.org/C21442007","wikidata":"https://www.wikidata.org/wiki/Q1027879","display_name":"Graphics","level":2,"score":0.5785811543464661},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.45284852385520935},{"id":"https://openalex.org/C77660652","wikidata":"https://www.wikidata.org/wiki/Q150971","display_name":"Computer graphics","level":2,"score":0.43502774834632874},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.32365208864212036},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.25241103768348694},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.1988086700439453},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.13481605052947998},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.06324967741966248},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013329","descriptor_name":"Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013329","descriptor_name":"Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013329","descriptor_name":"Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D055672","descriptor_name":"Static Electricity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055672","descriptor_name":"Static Electricity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055672","descriptor_name":"Static Electricity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1007/s10822-004-3752-4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10822-004-3752-4","pdf_url":null,"source":{"id":"https://openalex.org/S64621741","display_name":"Journal of Computer-Aided Molecular Design","issn_l":"0920-654X","issn":["0920-654X","1573-4951"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computer-Aided Molecular Design","raw_type":"journal-article"},{"id":"pmid:15663001","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15663001","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of computer-aided molecular design","raw_type":null},{"id":"pmh:oai:pure.atira.dk:publications/e99ec2e0-4c23-45c1-8d17-0d5c560e42b7","is_oa":false,"landing_page_url":"https://research.abo.fi/en/publications/e99ec2e0-4c23-45c1-8d17-0d5c560e42b7","pdf_url":null,"source":{"id":"https://openalex.org/S4406923060","display_name":"\u00c5bo Akademi University Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Lehtonen , J , Still , D-J , Rantanen , V-V , Ekholm , J , Bj\u00f6rklund , D , Iftikhar , Z , Huhtala , M , Repo , S , Jussila , A , Jaakkola , J , Pentik\u00e4inen , O , Nyr\u00f6nen , T , Salminen , T , Gyllenberg , M &amp; Johnson , M S 2004 , ' BODIL: a molecular modeling environment for structure-function analysis and drug design ' , Journal of Computer-Aided Molecular Design , vol. 18 , no. 6 , pp. 401\u2013419 . https://doi.org/10.1007/s10822-004-3752-4","raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321108","display_name":"Academy of Finland","ror":"https://ror.org/05k73zm37"},{"id":"https://openalex.org/F4320321855","display_name":"Tekes","ror":"https://ror.org/02ag8cq23"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1485790693","https://openalex.org/W1561051169","https://openalex.org/W1602236319","https://openalex.org/W1649645444","https://openalex.org/W1971366619","https://openalex.org/W1991613172","https://openalex.org/W1995017064","https://openalex.org/W2014160633","https://openalex.org/W2015292449","https://openalex.org/W2025726910","https://openalex.org/W2025786614","https://openalex.org/W2065120788","https://openalex.org/W2065283382","https://openalex.org/W2072013456","https://openalex.org/W2080528351","https://openalex.org/W2080653934","https://openalex.org/W2084367350","https://openalex.org/W2091563009","https://openalex.org/W2095058079","https://openalex.org/W2101524123","https://openalex.org/W2108508060","https://openalex.org/W2123768693","https://openalex.org/W2125696348","https://openalex.org/W2127116852","https://openalex.org/W2130479394","https://openalex.org/W2150155770","https://openalex.org/W2158534713","https://openalex.org/W2159787258","https://openalex.org/W2988817687","https://openalex.org/W4254959137"],"related_works":["https://openalex.org/W2002869446","https://openalex.org/W2038255918","https://openalex.org/W2037810710","https://openalex.org/W1974904668","https://openalex.org/W4233461976","https://openalex.org/W200616046","https://openalex.org/W2041985731","https://openalex.org/W2987323350","https://openalex.org/W2086893361","https://openalex.org/W2051676847"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":11},{"year":2018,"cited_by_count":16},{"year":2017,"cited_by_count":10},{"year":2016,"cited_by_count":9},{"year":2015,"cited_by_count":11},{"year":2014,"cited_by_count":14},{"year":2013,"cited_by_count":15},{"year":2012,"cited_by_count":6}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
