{"id":"https://openalex.org/W2085774955","doi":"https://doi.org/10.1007/s10766-007-0057-y","title":"High-Scalability Parallelization of a Molecular Modeling Application: Performance and Productivity Comparison Between OpenMP and MPI Implementations","display_name":"High-Scalability Parallelization of a Molecular Modeling Application: Performance and Productivity Comparison Between OpenMP and MPI Implementations","publication_year":2007,"publication_date":"2007-07-19","ids":{"openalex":"https://openalex.org/W2085774955","doi":"https://doi.org/10.1007/s10766-007-0057-y","mag":"2085774955"},"language":"en","primary_location":{"id":"doi:10.1007/s10766-007-0057-y","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10766-007-0057-y","pdf_url":null,"source":{"id":"https://openalex.org/S148521650","display_name":"International Journal of Parallel Programming","issn_l":"0885-7458","issn":["0885-7458","1573-7640"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Parallel Programming","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071159305","display_name":"Russell A. Brown","orcid":"https://orcid.org/0000-0002-4217-1532"},"institutions":[{"id":"https://openalex.org/I1342911587","display_name":"Oracle (United States)","ror":"https://ror.org/006c77m33","country_code":"US","type":"company","lineage":["https://openalex.org/I1342911587"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Russell Brown","raw_affiliation_strings":["Sun Microsystems, Inc., 14 Network Circle, Menlo Park, CA, 94025, USA","Sun Microsystems, Inc. (Menlo Park, CA)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Sun Microsystems, Inc., 14 Network Circle, Menlo Park, CA, 94025, USA","institution_ids":["https://openalex.org/I1342911587"]},{"raw_affiliation_string":"Sun Microsystems, Inc. (Menlo Park, CA)","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010934520","display_name":"Ilya Sharapov","orcid":"https://orcid.org/0009-0004-8980-6170"},"institutions":[{"id":"https://openalex.org/I1311269955","display_name":"Apple (Israel)","ror":"https://ror.org/04ehjr030","country_code":"IL","type":"company","lineage":["https://openalex.org/I1311269955","https://openalex.org/I4210153776"]},{"id":"https://openalex.org/I4210153776","display_name":"Apple (United States)","ror":"https://ror.org/059hsda18","country_code":"US","type":"company","lineage":["https://openalex.org/I4210153776"]}],"countries":["IL","US"],"is_corresponding":false,"raw_author_name":"Ilya Sharapov","raw_affiliation_strings":["Apple, Inc., 1 Infinite Loop, Cupertino, CA, 95014, USA","Apple Inc. (Cupertino, CA)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Apple, Inc., 1 Infinite Loop, Cupertino, CA, 95014, USA","institution_ids":["https://openalex.org/I4210153776"]},{"raw_affiliation_string":"Apple Inc. (Cupertino, CA)","institution_ids":["https://openalex.org/I1311269955"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5071159305"],"corresponding_institution_ids":["https://openalex.org/I1342911587"],"apc_list":{"value":2890,"currency":"USD","value_usd":2890},"apc_paid":null,"fwci":0.5029,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.63875166,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"35","issue":"5","first_page":"441","last_page":"458"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11809","display_name":"Advanced NMR Techniques and Applications","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.84613037109375},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.7899713516235352},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.6713786125183105},{"id":"https://openalex.org/keywords/multiprocessing","display_name":"Multiprocessing","score":0.5832761526107788},{"id":"https://openalex.org/keywords/supercomputer","display_name":"Supercomputer","score":0.5611363649368286},{"id":"https://openalex.org/keywords/message-passing","display_name":"Message passing","score":0.5537400245666504},{"id":"https://openalex.org/keywords/theory-of-computation","display_name":"Theory of computation","score":0.5155932307243347},{"id":"https://openalex.org/keywords/implementation","display_name":"Implementation","score":0.4937783181667328},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.48508942127227783},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.46629637479782104},{"id":"https://openalex.org/keywords/parallel-algorithm","display_name":"Parallel algorithm","score":0.45521610975265503},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.2085389792919159},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1193414032459259},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.08190423250198364}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.84613037109375},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.7899713516235352},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.6713786125183105},{"id":"https://openalex.org/C4822641","wikidata":"https://www.wikidata.org/wiki/Q846651","display_name":"Multiprocessing","level":2,"score":0.5832761526107788},{"id":"https://openalex.org/C83283714","wikidata":"https://www.wikidata.org/wiki/Q121117","display_name":"Supercomputer","level":2,"score":0.5611363649368286},{"id":"https://openalex.org/C854659","wikidata":"https://www.wikidata.org/wiki/Q1859284","display_name":"Message passing","level":2,"score":0.5537400245666504},{"id":"https://openalex.org/C24858836","wikidata":"https://www.wikidata.org/wiki/Q844718","display_name":"Theory of computation","level":2,"score":0.5155932307243347},{"id":"https://openalex.org/C26713055","wikidata":"https://www.wikidata.org/wiki/Q245962","display_name":"Implementation","level":2,"score":0.4937783181667328},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.48508942127227783},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.46629637479782104},{"id":"https://openalex.org/C120373497","wikidata":"https://www.wikidata.org/wiki/Q1087987","display_name":"Parallel algorithm","level":2,"score":0.45521610975265503},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.2085389792919159},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1193414032459259},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.08190423250198364},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s10766-007-0057-y","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10766-007-0057-y","pdf_url":null,"source":{"id":"https://openalex.org/S148521650","display_name":"International Journal of Parallel Programming","issn_l":"0885-7458","issn":["0885-7458","1573-7640"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Parallel Programming","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6399999856948853,"id":"https://metadata.un.org/sdg/8","display_name":"Decent work and economic growth"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332180","display_name":"Defense Advanced Research Projects Agency","ror":"https://ror.org/02caytj08"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W94439627","https://openalex.org/W1510263988","https://openalex.org/W1556859836","https://openalex.org/W1587796446","https://openalex.org/W1607994596","https://openalex.org/W1974045947","https://openalex.org/W1980933072","https://openalex.org/W1986080936","https://openalex.org/W1997751072","https://openalex.org/W2006096882","https://openalex.org/W2047730466","https://openalex.org/W2076311080","https://openalex.org/W2110670340","https://openalex.org/W2122654894","https://openalex.org/W2131723216","https://openalex.org/W2134544924","https://openalex.org/W2138199172","https://openalex.org/W2150871235","https://openalex.org/W2163880888","https://openalex.org/W2197000251","https://openalex.org/W2903691225"],"related_works":["https://openalex.org/W2384867379","https://openalex.org/W2329539859","https://openalex.org/W2227905990","https://openalex.org/W2765823764","https://openalex.org/W3214280620","https://openalex.org/W3191490922","https://openalex.org/W2142561263","https://openalex.org/W2059224396","https://openalex.org/W49536250","https://openalex.org/W2126790453"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
