{"id":"https://openalex.org/W4413843753","doi":"https://doi.org/10.1007/s10586-025-05283-3","title":"Deep learning data handling: exploring file formats and access strategies","display_name":"Deep learning data handling: exploring file formats and access strategies","publication_year":2025,"publication_date":"2025-08-30","ids":{"openalex":"https://openalex.org/W4413843753","doi":"https://doi.org/10.1007/s10586-025-05283-3"},"language":"en","primary_location":{"id":"doi:10.1007/s10586-025-05283-3","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10586-025-05283-3","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10586-025-05283-3.pdf","source":{"id":"https://openalex.org/S106148199","display_name":"Cluster Computing","issn_l":"1386-7857","issn":["1386-7857","1573-7543"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Cluster Computing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/s10586-025-05283-3.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089568787","display_name":"Edixon P\u00e1rraga","orcid":"https://orcid.org/0000-0002-5038-7827"},"institutions":[{"id":"https://openalex.org/I123044942","display_name":"Universitat Aut\u00f2noma de Barcelona","ror":"https://ror.org/052g8jq94","country_code":"ES","type":"education","lineage":["https://openalex.org/I123044942"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Edixon Parraga","raw_affiliation_strings":["Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d\u2019Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d'Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d\u2019Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","institution_ids":["https://openalex.org/I123044942"]},{"raw_affiliation_string":"Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d'Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","institution_ids":["https://openalex.org/I123044942"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004175230","display_name":"Betzabeth Le\u00f3n","orcid":"https://orcid.org/0000-0003-1778-0237"},"institutions":[{"id":"https://openalex.org/I123044942","display_name":"Universitat Aut\u00f2noma de Barcelona","ror":"https://ror.org/052g8jq94","country_code":"ES","type":"education","lineage":["https://openalex.org/I123044942"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Betzabeth Leon","raw_affiliation_strings":["Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d\u2019Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d'Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d\u2019Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","institution_ids":["https://openalex.org/I123044942"]},{"raw_affiliation_string":"Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d'Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","institution_ids":["https://openalex.org/I123044942"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031761018","display_name":"Sandra M\u00e9ndez","orcid":"https://orcid.org/0000-0002-5793-1928"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Sandra Mendez","raw_affiliation_strings":["Computer Sciences Department, Barcelona Supercomputing Center (BSC), Plaza Eusebi G\u00fcell, 1-3, 08034, Barcelona, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Sciences Department, Barcelona Supercomputing Center (BSC), Plaza Eusebi G\u00fcell, 1-3, 08034, Barcelona, Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I2799803557"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051751511","display_name":"Dolores Rexachs","orcid":"https://orcid.org/0000-0001-5500-850X"},"institutions":[{"id":"https://openalex.org/I123044942","display_name":"Universitat Aut\u00f2noma de Barcelona","ror":"https://ror.org/052g8jq94","country_code":"ES","type":"education","lineage":["https://openalex.org/I123044942"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Dolores Rexachs","raw_affiliation_strings":["Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d\u2019Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d\u2019Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","institution_ids":["https://openalex.org/I123044942"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067233712","display_name":"Daniel Franco","orcid":"https://orcid.org/0000-0003-0002-7046"},"institutions":[{"id":"https://openalex.org/I123044942","display_name":"Universitat Aut\u00f2noma de Barcelona","ror":"https://ror.org/052g8jq94","country_code":"ES","type":"education","lineage":["https://openalex.org/I123044942"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Daniel Franco","raw_affiliation_strings":["Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d\u2019Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d'Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d\u2019Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","institution_ids":["https://openalex.org/I123044942"]},{"raw_affiliation_string":"Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d'Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","institution_ids":["https://openalex.org/I123044942"]}]},{"author_position":"last","author":{"id":null,"display_name":"Emilio Luque","orcid":null},"institutions":[{"id":"https://openalex.org/I123044942","display_name":"Universitat Aut\u00f2noma de Barcelona","ror":"https://ror.org/052g8jq94","country_code":"ES","type":"education","lineage":["https://openalex.org/I123044942"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Emilio Luque","raw_affiliation_strings":["Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d\u2019Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d'Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d\u2019Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","institution_ids":["https://openalex.org/I123044942"]},{"raw_affiliation_string":"Computer Architecture and Operating Systems Department, Universitat Aut\u00f2noma de Barcelona (UAB), Edifici Q. Escola d'Enginyeria - Carrer de les Sitges, 08193, Bellaterra, Barcelona, Spain","institution_ids":["https://openalex.org/I123044942"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5089568787"],"corresponding_institution_ids":["https://openalex.org/I123044942"],"apc_list":{"value":2190,"currency":"EUR","value_usd":2790},"apc_paid":{"value":2190,"currency":"EUR","value_usd":2790},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.2279634,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"28","issue":"9","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11438","display_name":"Retinal Imaging and Analysis","score":0.9714999794960022,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.9374589920043945},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.39978739619255066},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.35661381483078003},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.35657641291618347},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3476688265800476},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.33099937438964844}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.9374589920043945},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.39978739619255066},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.35661381483078003},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35657641291618347},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3476688265800476},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.33099937438964844}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/s10586-025-05283-3","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10586-025-05283-3","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10586-025-05283-3.pdf","source":{"id":"https://openalex.org/S106148199","display_name":"Cluster Computing","issn_l":"1386-7857","issn":["1386-7857","1573-7543"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Cluster Computing","raw_type":"journal-article"},{"id":"pmh:oai:upcommons.upc.edu:2117/441257","is_oa":true,"landing_page_url":"https://hdl.handle.net/2117/441257","pdf_url":null,"source":{"id":"https://openalex.org/S4377196262","display_name":"UPCommons institutional repository (Universitat Polit\u00e8cnica de Catalunya)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I9617848","host_organization_name":"Universitat Polit\u00e8cnica de Catalunya","host_organization_lineage":["https://openalex.org/I9617848"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:ddd.uab.cat:319133","is_oa":true,"landing_page_url":"https://ddd.uab.cat/record/319133","pdf_url":"https://ddd.uab.cat/pub/artpub/2025/319133/s10586-025-05283-3.pdf","source":{"id":"https://openalex.org/S4306400381","display_name":"Dip\u00f2sit Digital de Documents de la UAB (Universitat Aut\u00f2noma de Barcelona)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I123044942","host_organization_name":"Universitat Aut\u00f2noma de Barcelona","host_organization_lineage":["https://openalex.org/I123044942"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1007/s10586-025-05283-3","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10586-025-05283-3","pdf_url":"https://link.springer.com/content/pdf/10.1007/s10586-025-05283-3.pdf","source":{"id":"https://openalex.org/S106148199","display_name":"Cluster Computing","issn_l":"1386-7857","issn":["1386-7857","1573-7543"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Cluster Computing","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8750971426","display_name":null,"funder_award_id":"PID2020-112496GB-I00","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"}],"funders":[{"id":"https://openalex.org/F4320326826","display_name":"Universitat Aut\u00f2noma de Barcelona","ror":"https://ror.org/052g8jq94"},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320335598","display_name":"Agencia Estatal de Investigaci\u00f3n","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4413843753.pdf","grobid_xml":"https://content.openalex.org/works/W4413843753.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W2021171338","https://openalex.org/W2033356273","https://openalex.org/W2042992924","https://openalex.org/W2117539524","https://openalex.org/W2134053106","https://openalex.org/W2140196014","https://openalex.org/W2612336981","https://openalex.org/W2618530766","https://openalex.org/W2794220248","https://openalex.org/W2950636903","https://openalex.org/W2951947775","https://openalex.org/W2968530953","https://openalex.org/W2998689333","https://openalex.org/W3001252221","https://openalex.org/W3086154835","https://openalex.org/W3102254513","https://openalex.org/W3173397016","https://openalex.org/W4249806163","https://openalex.org/W4286307999","https://openalex.org/W4400410154","https://openalex.org/W4403282639"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2003932708","https://openalex.org/W1967424056","https://openalex.org/W2284877871","https://openalex.org/W2138102289","https://openalex.org/W868043274","https://openalex.org/W2513523087","https://openalex.org/W1187916458","https://openalex.org/W2373861055","https://openalex.org/W1559716973"],"abstract_inverted_index":{"Abstract":[0],"Accessing":[1],"large":[2],"volumes":[3],"of":[4,26,29,84,89,96,107,143,213,217,227],"data":[5,18,57,192,218],"presents":[6],"a":[7,33,167],"significant":[8],"challenge":[9],"when":[10],"finding":[11],"the":[12,17,24,46,64,82,90,94,112,135,141,153,157,200,211,215,225,240],"best":[13],"strategies":[14],"to":[15,55,132,156,162,199,232,238],"manage":[16],"efficiently.":[19],"Deep":[20],"learning":[21,145],"applications":[22],"require":[23],"processing":[25],"massive":[27],"amounts":[28],"data,":[30],"which":[31,100,138],"implies":[32],"considerable":[34],"access":[35,61,131,231],"Input/Output":[36],"(I/O)":[37],"load":[38],"on":[39,111,210],"computer":[40],"systems.":[41],"During":[42],"training,":[43],"interaction":[44],"with":[45,166,183],"I/O":[47,83],"system":[48,77,165],"intensifies":[49],"as":[50,115],"files":[51],"are":[52],"continuously":[53],"accessed":[54],"read":[56],"sets.":[58],"This":[59,187],"persistent":[60],"could":[62],"overload":[63],"file":[65,97,108,124,169,185,230],"system,":[66],"which,":[67],"in":[68,99,159,229],"turn,":[69],"adversely":[70],"impacts":[71],"application":[72],"performance":[73,142,181],"and":[74,87,221,224],"efficient":[75,130,202],"storage":[76,241],"utilization.":[78],"Several":[79],"factors":[80],"influence":[81],"these":[85],"applications,":[86],"one":[88],"most":[91],"relevant":[92],"is":[93,121,149,236],"variety":[95],"formats":[98,125],"datasets":[101,133],"can":[102,139],"be":[103],"stored.":[104,122],"The":[105],"choice":[106],"format":[109,117,154,198],"depends":[110],"use":[113],"case,":[114,161],"each":[116],"defines":[118],"how":[119],"information":[120],"Some":[123],"have":[126],"features":[127],"that":[128,152],"promote":[129],"during":[134],"training":[136],"phase,":[137],"improve":[140],"deep":[144],"applications.":[146],"Likewise,":[147],"it":[148,235],"also":[150],"important":[151],"adapts":[155],"context,":[158],"this":[160],"an":[163,174],"HPC":[164],"parallel":[168,184],"system.":[170],"We":[171],"will":[172,189,208],"propose":[173],"image":[175,191],"preprocessing":[176],"method":[177,188],"for":[178],"cases":[179],"where":[180],"improves":[182],"access.":[186],"transform":[190],"sets":[193],"from":[194],"their":[195],"original":[196],"JPEG":[197],"more":[201],"HDF5":[203],"format.":[204,242],"Thus,":[205],"our":[206],"research":[207],"focus":[209],"importance":[212],"understanding":[214],"mode":[216],"access,":[219],"spatial":[220],"temporal":[222],"patterns,":[223],"level":[226],"parallelism":[228],"determine":[233],"whether":[234],"advisable":[237],"change":[239]},"counts_by_year":[],"updated_date":"2026-06-13T06:13:01.061226","created_date":"2025-10-10T00:00:00"}
