{"id":"https://openalex.org/W2008903345","doi":"https://doi.org/10.1007/s10586-007-0020-0","title":"An exact parallel algorithm to compare very long biological sequences in clusters of workstations","display_name":"An exact parallel algorithm to compare very long biological sequences in clusters of workstations","publication_year":2007,"publication_date":"2007-04-04","ids":{"openalex":"https://openalex.org/W2008903345","doi":"https://doi.org/10.1007/s10586-007-0020-0","mag":"2008903345"},"language":"en","primary_location":{"id":"doi:10.1007/s10586-007-0020-0","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10586-007-0020-0","pdf_url":null,"source":{"id":"https://openalex.org/S106148199","display_name":"Cluster Computing","issn_l":"1386-7857","issn":["1386-7857","1573-7543"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Cluster Computing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012195474","display_name":"Azzedine Boukerche","orcid":"https://orcid.org/0000-0002-3851-9938"},"institutions":[{"id":"https://openalex.org/I153718931","display_name":"University of Ottawa","ror":"https://ror.org/03c4mmv16","country_code":"CA","type":"education","lineage":["https://openalex.org/I153718931"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Azzedine Boukerche","raw_affiliation_strings":["SITE, University of Ottawa, Ottawa, Canada","SITE \u2013 University of Ottawa, Ottawa, Canad\u00e1"],"affiliations":[{"raw_affiliation_string":"SITE, University of Ottawa, Ottawa, Canada","institution_ids":["https://openalex.org/I153718931"]},{"raw_affiliation_string":"SITE \u2013 University of Ottawa, Ottawa, Canad\u00e1","institution_ids":["https://openalex.org/I153718931"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005717412","display_name":"Alba Cristina Magalh\u00e3es Alves de Melo","orcid":"https://orcid.org/0000-0001-5191-5209"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Alba Cristina Magalhaes Alves de Melo","raw_affiliation_strings":["University of Brasilia, Brasilia, Brazil"],"affiliations":[{"raw_affiliation_string":"University of Brasilia, Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058639233","display_name":"Edans F. O. Sandes","orcid":"https://orcid.org/0000-0001-9502-7799"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Edans Flavius de Oliveira Sandes","raw_affiliation_strings":["University of Brasilia, Brasilia, Brazil","University of Bras\u00edlia, Bras\u00edlia, Brazil#TAB#"],"affiliations":[{"raw_affiliation_string":"University of Brasilia, Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]},{"raw_affiliation_string":"University of Bras\u00edlia, Bras\u00edlia, Brazil#TAB#","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043206848","display_name":"Maur\u00edcio Ayala-Rinc\u00f3n","orcid":"https://orcid.org/0000-0003-0089-3905"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Mauricio Ayala-Rincon","raw_affiliation_strings":["University of Brasilia, Brasilia, Brazil","University of Bras\u00edlia, Bras\u00edlia, Brazil#TAB#"],"affiliations":[{"raw_affiliation_string":"University of Brasilia, Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]},{"raw_affiliation_string":"University of Bras\u00edlia, Bras\u00edlia, Brazil#TAB#","institution_ids":["https://openalex.org/I150729083"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5012195474"],"corresponding_institution_ids":["https://openalex.org/I153718931"],"apc_list":{"value":2190,"currency":"EUR","value_usd":2790},"apc_paid":null,"fwci":3.4055,"has_fulltext":false,"cited_by_count":20,"citation_normalized_percentile":{"value":0.9246396,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"10","issue":"2","first_page":"187","last_page":"202"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7967303991317749},{"id":"https://openalex.org/keywords/workstation","display_name":"Workstation","score":0.7001895904541016},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.6914761662483215},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.6247327327728271},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6200045943260193},{"id":"https://openalex.org/keywords/smith\u2013waterman-algorithm","display_name":"Smith\u2013Waterman algorithm","score":0.6103509664535522},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.5422267913818359},{"id":"https://openalex.org/keywords/dynamic-programming","display_name":"Dynamic programming","score":0.4970703423023224},{"id":"https://openalex.org/keywords/cluster","display_name":"Cluster (spacecraft)","score":0.4931142032146454},{"id":"https://openalex.org/keywords/quadratic-equation","display_name":"Quadratic equation","score":0.48159071803092957},{"id":"https://openalex.org/keywords/time-complexity","display_name":"Time complexity","score":0.4769541025161743},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.4384879171848297},{"id":"https://openalex.org/keywords/parallel-algorithm","display_name":"Parallel algorithm","score":0.4148377478122711},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.2907349765300751},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1733817756175995},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.13269874453544617},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09933757781982422}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7967303991317749},{"id":"https://openalex.org/C67953723","wikidata":"https://www.wikidata.org/wiki/Q192525","display_name":"Workstation","level":2,"score":0.7001895904541016},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.6914761662483215},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.6247327327728271},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6200045943260193},{"id":"https://openalex.org/C72802188","wikidata":"https://www.wikidata.org/wiki/Q1683352","display_name":"Smith\u2013Waterman algorithm","level":5,"score":0.6103509664535522},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.5422267913818359},{"id":"https://openalex.org/C37404715","wikidata":"https://www.wikidata.org/wiki/Q380679","display_name":"Dynamic programming","level":2,"score":0.4970703423023224},{"id":"https://openalex.org/C164866538","wikidata":"https://www.wikidata.org/wiki/Q367351","display_name":"Cluster (spacecraft)","level":2,"score":0.4931142032146454},{"id":"https://openalex.org/C129844170","wikidata":"https://www.wikidata.org/wiki/Q41299","display_name":"Quadratic equation","level":2,"score":0.48159071803092957},{"id":"https://openalex.org/C311688","wikidata":"https://www.wikidata.org/wiki/Q2393193","display_name":"Time complexity","level":2,"score":0.4769541025161743},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.4384879171848297},{"id":"https://openalex.org/C120373497","wikidata":"https://www.wikidata.org/wiki/Q1087987","display_name":"Parallel algorithm","level":2,"score":0.4148377478122711},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.2907349765300751},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1733817756175995},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.13269874453544617},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09933757781982422},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s10586-007-0020-0","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10586-007-0020-0","pdf_url":null,"source":{"id":"https://openalex.org/S106148199","display_name":"Cluster Computing","issn_l":"1386-7857","issn":["1386-7857","1573-7543"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Cluster Computing","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":33,"referenced_works":["https://openalex.org/W45319280","https://openalex.org/W89991367","https://openalex.org/W97436512","https://openalex.org/W272757838","https://openalex.org/W629442135","https://openalex.org/W938539187","https://openalex.org/W1549027255","https://openalex.org/W1554088294","https://openalex.org/W1578711114","https://openalex.org/W1589993665","https://openalex.org/W1602846425","https://openalex.org/W1893008471","https://openalex.org/W1990061958","https://openalex.org/W2001496424","https://openalex.org/W2004754163","https://openalex.org/W2008841836","https://openalex.org/W2011632873","https://openalex.org/W2015292449","https://openalex.org/W2055043387","https://openalex.org/W2061996139","https://openalex.org/W2074231493","https://openalex.org/W2078889228","https://openalex.org/W2083432626","https://openalex.org/W2087064593","https://openalex.org/W2100451901","https://openalex.org/W2109710144","https://openalex.org/W2125854927","https://openalex.org/W2130200371","https://openalex.org/W2152950327","https://openalex.org/W2156524063","https://openalex.org/W2165654401","https://openalex.org/W3148748026","https://openalex.org/W3172448017"],"related_works":["https://openalex.org/W2045348955","https://openalex.org/W2352028719","https://openalex.org/W2584886384","https://openalex.org/W2378667902","https://openalex.org/W2791088446","https://openalex.org/W2811338992","https://openalex.org/W2127279938","https://openalex.org/W2152950327","https://openalex.org/W1482324242","https://openalex.org/W1989397826"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}