{"id":"https://openalex.org/W4394848989","doi":"https://doi.org/10.1007/s10489-024-05442-w","title":"Graph attention autoencoder model with dual decoder for clustering single-cell RNA sequencing data","display_name":"Graph attention autoencoder model with dual decoder for clustering single-cell RNA sequencing data","publication_year":2024,"publication_date":"2024-03-01","ids":{"openalex":"https://openalex.org/W4394848989","doi":"https://doi.org/10.1007/s10489-024-05442-w"},"language":"en","primary_location":{"id":"doi:10.1007/s10489-024-05442-w","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10489-024-05442-w","pdf_url":null,"source":{"id":"https://openalex.org/S74726891","display_name":"Applied Intelligence","issn_l":"0924-669X","issn":["0924-669X","1573-7497"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Intelligence","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100389987","display_name":"Shudong Wang","orcid":"https://orcid.org/0000-0003-4360-6718"},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]},{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shudong Wang","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum, Qingdao, 266580, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum, Qingdao, 266580, China","institution_ids":["https://openalex.org/I4210128818","https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101609917","display_name":"Y. Zhang","orcid":"https://orcid.org/0009-0003-7914-6159"},"institutions":[{"id":"https://openalex.org/I44468530","display_name":"Qingdao University of Technology","ror":"https://ror.org/01qzc0f54","country_code":"CN","type":"education","lineage":["https://openalex.org/I44468530"]},{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]},{"id":"https://openalex.org/I80143920","display_name":"Shandong University of Science and Technology","ror":"https://ror.org/04gtjhw98","country_code":"CN","type":"education","lineage":["https://openalex.org/I80143920"]},{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]},{"id":"https://openalex.org/I143413998","display_name":"Qingdao University of Science and Technology","ror":"https://ror.org/041j8js14","country_code":"CN","type":"education","lineage":["https://openalex.org/I143413998"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yu Zhang","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum, Qingdao, 266580, China","College of Mathematics and Systems Science, Shandong University of Science and Technology, Qingdao, 266590, China","School of Information and Control Engineering, Qingdao University of Technology, Qingdao, 266525, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum, Qingdao, 266580, China","institution_ids":["https://openalex.org/I4210128818","https://openalex.org/I4210162190"]},{"raw_affiliation_string":"College of Mathematics and Systems Science, Shandong University of Science and Technology, Qingdao, 266590, China","institution_ids":["https://openalex.org/I80143920"]},{"raw_affiliation_string":"School of Information and Control Engineering, Qingdao University of Technology, Qingdao, 266525, China","institution_ids":["https://openalex.org/I143413998","https://openalex.org/I44468530"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100320622","display_name":"Yuanyuan Zhang","orcid":"https://orcid.org/0000-0001-6972-5606"},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]},{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]},{"id":"https://openalex.org/I143413998","display_name":"Qingdao University of Science and Technology","ror":"https://ror.org/041j8js14","country_code":"CN","type":"education","lineage":["https://openalex.org/I143413998"]},{"id":"https://openalex.org/I44468530","display_name":"Qingdao University of Technology","ror":"https://ror.org/01qzc0f54","country_code":"CN","type":"education","lineage":["https://openalex.org/I44468530"]},{"id":"https://openalex.org/I80143920","display_name":"Shandong University of Science and Technology","ror":"https://ror.org/04gtjhw98","country_code":"CN","type":"education","lineage":["https://openalex.org/I80143920"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuanyuan Zhang","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum, Qingdao, 266580, China","College of Mathematics and Systems Science, Shandong University of Science and Technology, Qingdao, 266590, China","School of Information and Control Engineering, Qingdao University of Technology, Qingdao, 266525, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum, Qingdao, 266580, China","institution_ids":["https://openalex.org/I4210128818","https://openalex.org/I4210162190"]},{"raw_affiliation_string":"College of Mathematics and Systems Science, Shandong University of Science and Technology, Qingdao, 266590, China","institution_ids":["https://openalex.org/I80143920"]},{"raw_affiliation_string":"School of Information and Control Engineering, Qingdao University of Technology, Qingdao, 266525, China","institution_ids":["https://openalex.org/I143413998","https://openalex.org/I44468530"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004783206","display_name":"Yulin Zhang","orcid":"https://orcid.org/0000-0002-9125-5273"},"institutions":[{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]},{"id":"https://openalex.org/I143413998","display_name":"Qingdao University of Science and Technology","ror":"https://ror.org/041j8js14","country_code":"CN","type":"education","lineage":["https://openalex.org/I143413998"]},{"id":"https://openalex.org/I44468530","display_name":"Qingdao University of Technology","ror":"https://ror.org/01qzc0f54","country_code":"CN","type":"education","lineage":["https://openalex.org/I44468530"]},{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]},{"id":"https://openalex.org/I80143920","display_name":"Shandong University of Science and Technology","ror":"https://ror.org/04gtjhw98","country_code":"CN","type":"education","lineage":["https://openalex.org/I80143920"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yulin Zhang","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum, Qingdao, 266580, China","College of Mathematics and Systems Science, Shandong University of Science and Technology, Qingdao, 266590, China","School of Information and Control Engineering, Qingdao University of Technology, Qingdao, 266525, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum, Qingdao, 266580, China","institution_ids":["https://openalex.org/I4210128818","https://openalex.org/I4210162190"]},{"raw_affiliation_string":"College of Mathematics and Systems Science, Shandong University of Science and Technology, Qingdao, 266590, China","institution_ids":["https://openalex.org/I80143920"]},{"raw_affiliation_string":"School of Information and Control Engineering, Qingdao University of Technology, Qingdao, 266525, China","institution_ids":["https://openalex.org/I143413998","https://openalex.org/I44468530"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021584178","display_name":"Shanchen Pang","orcid":"https://orcid.org/0000-0003-3734-2736"},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]},{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shanchen Pang","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum, Qingdao, 266580, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum, Qingdao, 266580, China","institution_ids":["https://openalex.org/I4210128818","https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085156744","display_name":"Jionglong Su","orcid":"https://orcid.org/0000-0001-5360-6493"},"institutions":[{"id":"https://openalex.org/I69356397","display_name":"Xi\u2019an Jiaotong-Liverpool University","ror":"https://ror.org/03zmrmn05","country_code":"CN","type":"education","lineage":["https://openalex.org/I69356397"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jionglong Su","raw_affiliation_strings":["School of AI and Advanced Computing, XJTLU Entrepreneur College (Taicang), Xi\u2019an Jiaotong-Liverpool University, Suzhou, 215123, China","School of AI and Advanced Computing, XJTLU Entrepreneur College (Taicang), Xi'an Jiaotong-Liverpool University, Suzhou, 215123, China"],"affiliations":[{"raw_affiliation_string":"School of AI and Advanced Computing, XJTLU Entrepreneur College (Taicang), Xi\u2019an Jiaotong-Liverpool University, Suzhou, 215123, China","institution_ids":["https://openalex.org/I69356397"]},{"raw_affiliation_string":"School of AI and Advanced Computing, XJTLU Entrepreneur College (Taicang), Xi'an Jiaotong-Liverpool University, Suzhou, 215123, China","institution_ids":["https://openalex.org/I69356397"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113179279","display_name":"Yingye Liu","orcid":"https://orcid.org/0009-0003-6791-590X"},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]},{"id":"https://openalex.org/I4210128818","display_name":"Institute of Software","ror":"https://ror.org/033dfsn42","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210128818"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yingye Liu","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum, Qingdao, 266580, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum, Qingdao, 266580, China","institution_ids":["https://openalex.org/I4210128818","https://openalex.org/I4210162190"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5004783206"],"corresponding_institution_ids":["https://openalex.org/I143413998","https://openalex.org/I4210128818","https://openalex.org/I4210162190","https://openalex.org/I44468530","https://openalex.org/I80143920"],"apc_list":{"value":2390,"currency":"EUR","value_usd":2990},"apc_paid":null,"fwci":1.7006,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.83428102,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"54","issue":"6","first_page":"5136","last_page":"5146"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10773","display_name":"Extracellular vesicles in disease","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8725149631500244},{"id":"https://openalex.org/keywords/autoencoder","display_name":"Autoencoder","score":0.7377371788024902},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5846672058105469},{"id":"https://openalex.org/keywords/dual","display_name":"Dual (grammatical number)","score":0.5308464765548706},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.42914432287216187},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.36041736602783203},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.18106231093406677},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.1327415406703949}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8725149631500244},{"id":"https://openalex.org/C101738243","wikidata":"https://www.wikidata.org/wiki/Q786435","display_name":"Autoencoder","level":3,"score":0.7377371788024902},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5846672058105469},{"id":"https://openalex.org/C2780980858","wikidata":"https://www.wikidata.org/wiki/Q110022","display_name":"Dual (grammatical number)","level":2,"score":0.5308464765548706},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.42914432287216187},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.36041736602783203},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.18106231093406677},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.1327415406703949},{"id":"https://openalex.org/C124952713","wikidata":"https://www.wikidata.org/wiki/Q8242","display_name":"Literature","level":1,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s10489-024-05442-w","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10489-024-05442-w","pdf_url":null,"source":{"id":"https://openalex.org/S74726891","display_name":"Applied Intelligence","issn_l":"0924-669X","issn":["0924-669X","1573-7497"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Intelligence","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":38,"referenced_works":["https://openalex.org/W1552434751","https://openalex.org/W1967489571","https://openalex.org/W2010653277","https://openalex.org/W2051658465","https://openalex.org/W2111882541","https://openalex.org/W2135937351","https://openalex.org/W2523620612","https://openalex.org/W2526262591","https://openalex.org/W2598326928","https://openalex.org/W2788348358","https://openalex.org/W2800392236","https://openalex.org/W2887326710","https://openalex.org/W2894687190","https://openalex.org/W2907783748","https://openalex.org/W2921554869","https://openalex.org/W2924067995","https://openalex.org/W2937917790","https://openalex.org/W2951506174","https://openalex.org/W2953251392","https://openalex.org/W2955621471","https://openalex.org/W3009302866","https://openalex.org/W3024013192","https://openalex.org/W3029148360","https://openalex.org/W3113251307","https://openalex.org/W3138479716","https://openalex.org/W3165190053","https://openalex.org/W3173371682","https://openalex.org/W3189065844","https://openalex.org/W3199336417","https://openalex.org/W4205281625","https://openalex.org/W4213136259","https://openalex.org/W4214646832","https://openalex.org/W4221024935","https://openalex.org/W4226018745","https://openalex.org/W4296483662","https://openalex.org/W4313424570","https://openalex.org/W4321373787","https://openalex.org/W4386467284"],"related_works":["https://openalex.org/W3013693939","https://openalex.org/W2159052453","https://openalex.org/W2566616303","https://openalex.org/W3131327266","https://openalex.org/W2734887215","https://openalex.org/W4297051394","https://openalex.org/W2752972570","https://openalex.org/W2145836866","https://openalex.org/W4220775285","https://openalex.org/W2891286602"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":5}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}